| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230163
Identifier: 17230163
GI number: 17230163
Start: 3236675
End: 3237646
Strand: Reverse
Name: 17230163
Synonym: all2671
Alternate gene names: NA
Gene position: 3237646-3236675 (Counterclockwise)
Preceding gene: 17230164
Following gene: 17230162
Centisome position: 50.48
GC content: 40.74
Gene sequence:
>972_bases ATGAAACAAGCATTTTCCGCTATTTTGCGGTTTGAAACTTTTTATCATCTCCGTCGCCCGACGTTTTGGTTAATTGCTAT CTTATTTTTCGCCATTGGACTCACCGATATAGTTGCGAAAGCTGGGCCTGGTAACGCCTTCTTTTTTGTCAATAGTCCGG CGGAAATCTTTCAAGTTACTATTTGGTATACCATTTTTGGAATTTTGGCAGCATCGGCTTTTGTGGCTGAAACTTTTGTG CGGGATAGTAATTACCGTATGGAAGCTTTAATTTTGGCTACTCCCATCCGTAAACGGGACTATTTAACAACCCGCTTCAT CGCTGCATTTGGAATGACGCTTTTGGCGTTTTCTACCTATATACCAGGGATGCTTTTAGGTACTGTTATACCTGGATTAA ACCCCTTTGCTTTGGGTGCATTTCGTCCTGAAGCTTATGTGGCTAGTTATGTATTATTTGTATTACCCAATCTATTTTTA GTTTCTGCGATCGCATTTAGTATTGCTTCCAAAACCAGAAGTATTATCATTACCTATGCTGGGGCAATTGTTCTTGTCAT GCTCTACCTGGTTTCTCTGATGCTGGTGGGGGTAGATGTCATCGACTTTGAATTATACCGCATCTGGGCAATGTTAGACC CCTTTGGCTTTTATGCTTTTGAAGAAAAAACCCTGACTTGGACAGTTTTCCAGCATAATAATTTGATGCCGTCTTTAGGG GGAACACTGCTGTGGAATCGTCTACTTTGGATTACCATTGCTGTGGCTGGTTGGATGTGGAGTTATCACACCTATTCAAT GAAGGTGATGGGAAAATCTCCTGTGAAAACCAAAGTGAAGACTACAAAGTCTCAACCAATAAATATCAATAGAAATTATT CCCCCGCTTATTCTCCTGCATCTTCCTTACTATGGCAACAATGGATTAACCGCGCTTGGTTTGAAACTAACTTAATTTTA CGAGGGTGTTAA
Upstream 100 bases:
>100_bases ATTCTCAACCCGGTAAGGATTTTCAACCTGTTGAACCGGATTTAAATGATGTTTATTTCATTGCGTTATTAGATAAACCC CAATCTCAAACTATTGCTGT
Downstream 100 bases:
>100_bases TTTCTCTCTCAAAAATTCCTCTCCACGCCCTGGGTTTATATCATAATCTCTACCGTTTTGCTGCTACCAATGATATTGAA TATTCCTTAATGAACGGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Aminopeptidase N-Like Protein; Peptidase M1 Membrane Alanine Aminopeptidase
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKQAFSAILRFETFYHLRRPTFWLIAILFFAIGLTDIVAKAGPGNAFFFVNSPAEIFQVTIWYTIFGILAASAFVAETFV RDSNYRMEALILATPIRKRDYLTTRFIAAFGMTLLAFSTYIPGMLLGTVIPGLNPFALGAFRPEAYVASYVLFVLPNLFL VSAIAFSIASKTRSIIITYAGAIVLVMLYLVSLMLVGVDVIDFELYRIWAMLDPFGFYAFEEKTLTWTVFQHNNLMPSLG GTLLWNRLLWITIAVAGWMWSYHTYSMKVMGKSPVKTKVKTTKSQPININRNYSPAYSPASSLLWQQWINRAWFETNLIL RGC
Sequences:
>Translated_323_residues MKQAFSAILRFETFYHLRRPTFWLIAILFFAIGLTDIVAKAGPGNAFFFVNSPAEIFQVTIWYTIFGILAASAFVAETFV RDSNYRMEALILATPIRKRDYLTTRFIAAFGMTLLAFSTYIPGMLLGTVIPGLNPFALGAFRPEAYVASYVLFVLPNLFL VSAIAFSIASKTRSIIITYAGAIVLVMLYLVSLMLVGVDVIDFELYRIWAMLDPFGFYAFEEKTLTWTVFQHNNLMPSLG GTLLWNRLLWITIAVAGWMWSYHTYSMKVMGKSPVKTKVKTTKSQPININRNYSPAYSPASSLLWQQWINRAWFETNLIL RGC >Mature_323_residues MKQAFSAILRFETFYHLRRPTFWLIAILFFAIGLTDIVAKAGPGNAFFFVNSPAEIFQVTIWYTIFGILAASAFVAETFV RDSNYRMEALILATPIRKRDYLTTRFIAAFGMTLLAFSTYIPGMLLGTVIPGLNPFALGAFRPEAYVASYVLFVLPNLFL VSAIAFSIASKTRSIIITYAGAIVLVMLYLVSLMLVGVDVIDFELYRIWAMLDPFGFYAFEEKTLTWTVFQHNNLMPSLG GTLLWNRLLWITIAVAGWMWSYHTYSMKVMGKSPVKTKVKTTKSQPININRNYSPAYSPASSLLWQQWINRAWFETNLIL RGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36681; Mature: 36681
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQAFSAILRFETFYHLRRPTFWLIAILFFAIGLTDIVAKAGPGNAFFFVNSPAEIFQVT CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH IWYTIFGILAASAFVAETFVRDSNYRMEALILATPIRKRDYLTTRFIAAFGMTLLAFSTY HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH IPGMLLGTVIPGLNPFALGAFRPEAYVASYVLFVLPNLFLVSAIAFSIASKTRSIIITYA HHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHH GAIVLVMLYLVSLMLVGVDVIDFELYRIWAMLDPFGFYAFEEKTLTWTVFQHNNLMPSLG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCEEEECCEEEEEEEECCCCCCCCC GTLLWNRLLWITIAVAGWMWSYHTYSMKVMGKSPVKTKVKTTKSQPININRNYSPAYSPA HHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHCCCCCCCEECCCCCCCCCCHH SSLLWQQWINRAWFETNLILRGC HHHHHHHHHHHHHHHCCEEEECC >Mature Secondary Structure MKQAFSAILRFETFYHLRRPTFWLIAILFFAIGLTDIVAKAGPGNAFFFVNSPAEIFQVT CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH IWYTIFGILAASAFVAETFVRDSNYRMEALILATPIRKRDYLTTRFIAAFGMTLLAFSTY HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH IPGMLLGTVIPGLNPFALGAFRPEAYVASYVLFVLPNLFLVSAIAFSIASKTRSIIITYA HHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHH GAIVLVMLYLVSLMLVGVDVIDFELYRIWAMLDPFGFYAFEEKTLTWTVFQHNNLMPSLG HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCEEEECCEEEEEEEECCCCCCCCC GTLLWNRLLWITIAVAGWMWSYHTYSMKVMGKSPVKTKVKTTKSQPININRNYSPAYSPA HHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHCCCCCCCEECCCCCCCCCCHH SSLLWQQWINRAWFETNLILRGC HHHHHHHHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA