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The map label for this gene is rhtA [H]

Identifier: 17230112

GI number: 17230112

Start: 3127032

End: 3128642

Strand: Reverse

Name: rhtA [H]

Synonym: all2620

Alternate gene names: 17230112

Gene position: 3128642-3127032 (Counterclockwise)

Preceding gene: 17230113

Following gene: 17230111

Centisome position: 48.78

GC content: 42.46

Gene sequence:

>1611_bases
ATGGCTAGTCAACTGCAAAGAGTTGTTTTGATGACGATATTAGCCTTGGTGTTAATTAATCTACCTGGGCGCGCAGAAGA
GAAAAAAGACGAAATCGAAAACCCTGTCACCAGTCTTAAACAATTACTTTCCCAAGCACAAATTCAGATTACCAATGTCA
AGTTACAAACAACTGACAAAGGGATAGAGATAATTTTAGAGACCAATCAAGGAGAACAGTTACAACCTGTAAATAAGAGC
CAGGGGAATGTCTATGTGGTGGAAATCCCCAATGCTCAATTAAGTCAGGAATTTCGCCAAGAAAATCCTGCTAGTGGCAT
TACTGATGTTGTTGTCAGCAATTTAGATACCAATACTATCAGGGTGACAGTTACAGGTGAAACAACATTACCAAACGTAG
AGTTGTTTGACGGCGACGAGGGTTTAATTTTAGGTGTAGAAGTTGCTGCATCATCTGTTCCACAACCTCCGCAACCAGAA
ACGCAACAGCCACAGACAGAACAACAGACACAACAACCATCTGCGGAAGTTGATGATGCAATTGAACTGATAGTGACAGC
GACACGAACAGAGGAAGCAATTACCAACGTACCGCGCAGTGTAACAGTTATTACCCGCGAAGAAATTGAGAAACAATCAA
CCATCACCAATGATTTAGGAGATATCTTAGGCCGGACAGTTCCAGGTTTGGGTCCGCCAAACTCCCTCAACCGCGCTGGT
AATGCTCAAACTTTGCGGGGTCGTCCAGTATCAATTTTGATTGACGGTGTACCACAGCAAGGTAATTCCTTTGTGAATAC
TCAGTTAGAGTACATTTCCCCAGATGCGATTGAACGGGTGGAAGTGGTGCGTGGCCCTACAGCCGTCTTTGGTCAAGGTG
CATCTGGTGGTGTCATCAATATTATTACGAGAAAGCCAGCTGAAGGATTTACTTCTACTGCTCAAGTTGGTATTAGTGCG
GCGGCGGCTGGTGATGCGTTCTTGGGAGAAAACAGCTTCGGCAATTATCTACAATATGGATTTTCCGGTAAAGATGGGAT
TTTTGATTATGTATTTTCCCTCTCACGTAATAGTGTAGGTGGTTTCTTTGATGCCGATGGTTCGCGGATTCCCAGTAACA
ACGCCACATCAGATGATACTGTCTCTACAAATATATTGGGCAAGATAGGAATAGATGTTGGGGAACAACAACGTCTACAA
TTTACCGTCAATCATGGCAATAATTCCCGTAAAATTAAATTTATCGCTGATCCGATTACGCGTACAATCCCTGGATTGCA
AACAACCCGTGCCTTAAGACAAAATCAGGTTTACGAAGGCACTGATGCACCTCGAATTACCAGTACATCTGTTAACCTCA
ACTATACTACAATACCTTCGCCAATTTTAGAGGGTGAGTTGATGTACAAACTCCCATTTCTCCGAAGCTGGGCAAAAACA
ATCAGTCCTAAAAATTCCTTCCAGGTTTATCGCAAGGCTTTTTTTGGCGTACTAACGCAGTATCAAGGGTTTCAGTCTCT
AACCTACCTTGTAAGCTCAAGGCTTATGTATTGGTTATTTTGCCATTTTTGCCAAAATTTTTTTACCCTCTTATTTTGGC
TAAGGTATTGA

Upstream 100 bases:

>100_bases
ATACTGTCTTAATTAAGCAAGTATTGGAGTCAATTTTTGCAGTTTACAAGACCATTTACTTAGAAAATTTCTCAATTTTT
GCATTCGGTTGTGTGGAGTT

Downstream 100 bases:

>100_bases
TACTAATGAGGCAGTTTTTGGTAGCAAACTGCAGGCCCAAGCCTATTATCGCAGTTCCGAAGAGTTAGGGGTAGGCAGAG
ATGACCGGGGTCGATTTGCA

Product: ferric aerobactin receptor

Products: NA

Alternate protein names: TonB-dependent siderophore receptor rhtA [H]

Number of amino acids: Translated: 536; Mature: 535

Protein sequence:

>536_residues
MASQLQRVVLMTILALVLINLPGRAEEKKDEIENPVTSLKQLLSQAQIQITNVKLQTTDKGIEIILETNQGEQLQPVNKS
QGNVYVVEIPNAQLSQEFRQENPASGITDVVVSNLDTNTIRVTVTGETTLPNVELFDGDEGLILGVEVAASSVPQPPQPE
TQQPQTEQQTQQPSAEVDDAIELIVTATRTEEAITNVPRSVTVITREEIEKQSTITNDLGDILGRTVPGLGPPNSLNRAG
NAQTLRGRPVSILIDGVPQQGNSFVNTQLEYISPDAIERVEVVRGPTAVFGQGASGGVINIITRKPAEGFTSTAQVGISA
AAAGDAFLGENSFGNYLQYGFSGKDGIFDYVFSLSRNSVGGFFDADGSRIPSNNATSDDTVSTNILGKIGIDVGEQQRLQ
FTVNHGNNSRKIKFIADPITRTIPGLQTTRALRQNQVYEGTDAPRITSTSVNLNYTTIPSPILEGELMYKLPFLRSWAKT
ISPKNSFQVYRKAFFGVLTQYQGFQSLTYLVSSRLMYWLFCHFCQNFFTLLFWLRY

Sequences:

>Translated_536_residues
MASQLQRVVLMTILALVLINLPGRAEEKKDEIENPVTSLKQLLSQAQIQITNVKLQTTDKGIEIILETNQGEQLQPVNKS
QGNVYVVEIPNAQLSQEFRQENPASGITDVVVSNLDTNTIRVTVTGETTLPNVELFDGDEGLILGVEVAASSVPQPPQPE
TQQPQTEQQTQQPSAEVDDAIELIVTATRTEEAITNVPRSVTVITREEIEKQSTITNDLGDILGRTVPGLGPPNSLNRAG
NAQTLRGRPVSILIDGVPQQGNSFVNTQLEYISPDAIERVEVVRGPTAVFGQGASGGVINIITRKPAEGFTSTAQVGISA
AAAGDAFLGENSFGNYLQYGFSGKDGIFDYVFSLSRNSVGGFFDADGSRIPSNNATSDDTVSTNILGKIGIDVGEQQRLQ
FTVNHGNNSRKIKFIADPITRTIPGLQTTRALRQNQVYEGTDAPRITSTSVNLNYTTIPSPILEGELMYKLPFLRSWAKT
ISPKNSFQVYRKAFFGVLTQYQGFQSLTYLVSSRLMYWLFCHFCQNFFTLLFWLRY
>Mature_535_residues
ASQLQRVVLMTILALVLINLPGRAEEKKDEIENPVTSLKQLLSQAQIQITNVKLQTTDKGIEIILETNQGEQLQPVNKSQ
GNVYVVEIPNAQLSQEFRQENPASGITDVVVSNLDTNTIRVTVTGETTLPNVELFDGDEGLILGVEVAASSVPQPPQPET
QQPQTEQQTQQPSAEVDDAIELIVTATRTEEAITNVPRSVTVITREEIEKQSTITNDLGDILGRTVPGLGPPNSLNRAGN
AQTLRGRPVSILIDGVPQQGNSFVNTQLEYISPDAIERVEVVRGPTAVFGQGASGGVINIITRKPAEGFTSTAQVGISAA
AAGDAFLGENSFGNYLQYGFSGKDGIFDYVFSLSRNSVGGFFDADGSRIPSNNATSDDTVSTNILGKIGIDVGEQQRLQF
TVNHGNNSRKIKFIADPITRTIPGLQTTRALRQNQVYEGTDAPRITSTSVNLNYTTIPSPILEGELMYKLPFLRSWAKTI
SPKNSFQVYRKAFFGVLTQYQGFQSLTYLVSSRLMYWLFCHFCQNFFTLLFWLRY

Specific function: Receptor for the siderophore rhizobactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=148, Percent_Identity=36.4864864864865, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786798, Length=159, Percent_Identity=36.4779874213836, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 58731; Mature: 58600

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQLQRVVLMTILALVLINLPGRAEEKKDEIENPVTSLKQLLSQAQIQITNVKLQTTDK
CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCC
GIEIILETNQGEQLQPVNKSQGNVYVVEIPNAQLSQEFRQENPASGITDVVVSNLDTNTI
CEEEEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHCCCCCEE
RVTVTGETTLPNVELFDGDEGLILGVEVAASSVPQPPQPETQQPQTEQQTQQPSAEVDDA
EEEEECCCCCCCCEEEECCCCEEEEEEEHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHH
IELIVTATRTEEAITNVPRSVTVITREEIEKQSTITNDLGDILGRTVPGLGPPNSLNRAG
EEHEEECCCHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC
NAQTLRGRPVSILIDGVPQQGNSFVNTQLEYISPDAIERVEVVRGPTAVFGQGASGGVIN
CCCEECCCCEEEEEECCCCCCCCEECCEEECCCCHHHHHHHHHCCCCCEECCCCCCCEEE
IITRKPAEGFTSTAQVGISAAAAGDAFLGENSFGNYLQYGFSGKDGIFDYVFSLSRNSVG
EEECCCCCCCCHHHHHCEEHHCCCCCCCCCCCCCCHHEECCCCCCHHHHHHHHHCCCCCC
GFFDADGSRIPSNNATSDDTVSTNILGKIGIDVGEQQRLQFTVNHGNNSRKIKFIADPIT
CEECCCCCCCCCCCCCCCCCCHHHHHEEECCCCCCCCEEEEEEECCCCCCEEEEEECCHH
RTIPGLQTTRALRQNQVYEGTDAPRITSTSVNLNYTTIPSPILEGELMYKLPFLRSWAKT
HHCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCCHHHCCCHHHHHHHHHHHHHH
ISPKNSFQVYRKAFFGVLTQYQGFQSLTYLVSSRLMYWLFCHFCQNFFTLLFWLRY
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASQLQRVVLMTILALVLINLPGRAEEKKDEIENPVTSLKQLLSQAQIQITNVKLQTTDK
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCC
GIEIILETNQGEQLQPVNKSQGNVYVVEIPNAQLSQEFRQENPASGITDVVVSNLDTNTI
CEEEEEECCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHCCCCCEE
RVTVTGETTLPNVELFDGDEGLILGVEVAASSVPQPPQPETQQPQTEQQTQQPSAEVDDA
EEEEECCCCCCCCEEEECCCCEEEEEEEHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHH
IELIVTATRTEEAITNVPRSVTVITREEIEKQSTITNDLGDILGRTVPGLGPPNSLNRAG
EEHEEECCCHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC
NAQTLRGRPVSILIDGVPQQGNSFVNTQLEYISPDAIERVEVVRGPTAVFGQGASGGVIN
CCCEECCCCEEEEEECCCCCCCCEECCEEECCCCHHHHHHHHHCCCCCEECCCCCCCEEE
IITRKPAEGFTSTAQVGISAAAAGDAFLGENSFGNYLQYGFSGKDGIFDYVFSLSRNSVG
EEECCCCCCCCHHHHHCEEHHCCCCCCCCCCCCCCHHEECCCCCCHHHHHHHHHCCCCCC
GFFDADGSRIPSNNATSDDTVSTNILGKIGIDVGEQQRLQFTVNHGNNSRKIKFIADPIT
CEECCCCCCCCCCCCCCCCCCHHHHHEEECCCCCCCCEEEEEEECCCCCCEEEEEECCHH
RTIPGLQTTRALRQNQVYEGTDAPRITSTSVNLNYTTIPSPILEGELMYKLPFLRSWAKT
HHCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEECCCHHHCCCHHHHHHHHHHHHHH
ISPKNSFQVYRKAFFGVLTQYQGFQSLTYLVSSRLMYWLFCHFCQNFFTLLFWLRY
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11274118; 11481432 [H]