| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is bcp [H]
Identifier: 17230048
GI number: 17230048
Start: 3056450
End: 3057007
Strand: Reverse
Name: bcp [H]
Synonym: all2556
Alternate gene names: 17230048
Gene position: 3057007-3056450 (Counterclockwise)
Preceding gene: 17230049
Following gene: 17230047
Centisome position: 47.66
GC content: 42.83
Gene sequence:
>558_bases ATGATTTCCCGACGCAATTTTCTGCATATTTTGCTTGTCAGCTGCTTTGCTGTTATTAGCTGGTTAAACTTGCCCCCCAC TGCCTATGCACTTGGGGGCAAACTCCCCCCTATCAACCAACCTGCACCCGATTTTACGTTACCAACCAATACAGGTGATG GTAAACTTTCTCTTGGTGATTTGCGGGGTAAATGGGTAGTCTTGTATTTTTACCCCAAAGACTTTACATCGGGTTGCACG ATTGAAGCTCGTCGTTTTCAGCAAGATTTACCAACCTATCTAGATAAAAATGTCCAGATTATTGGTGTGAGTGCTGATGA TATAGACTCCCATGCTGAATTTTGTGATTCCGAGGGTCTAAAATTTCCTTTGTTGGCTGATACTGATGGTGCAGTTAGTA AAGCCTACGGTTCTTGGATCGGTTATGTATCTATGCGTCATAGCTTTATCATCGATCCACAAGGTATTCTCCGGGAAACT TTTGTCAAAGTTAACCCGTCTGTTCACAGTACAGAAGTTTTGGCTCGACTTGAAAAATTGCAGTCCACAGCTTCTTGA
Upstream 100 bases:
>100_bases TCATGATGTGTAAGGGTGTAAAGATTGTGAACTGGAATATCTATACCCCCATCCCCTAAAAATTGTAAACTTGTGTAAAG ATATCATTCTTGTTTACATC
Downstream 100 bases:
>100_bases ACTTTGTTACCGAAAATTTGTGTTTAAAACCTCCCCTTTCTCAGGGGACTTTCATCACTAATGTTTGCAACCGTATCGGT ATTACATCAAAAGCAAGACA
Product: bacterioferritin comigratory protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein homolog; Thioredoxin reductase [H]
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MISRRNFLHILLVSCFAVISWLNLPPTAYALGGKLPPINQPAPDFTLPTNTGDGKLSLGDLRGKWVVLYFYPKDFTSGCT IEARRFQQDLPTYLDKNVQIIGVSADDIDSHAEFCDSEGLKFPLLADTDGAVSKAYGSWIGYVSMRHSFIIDPQGILRET FVKVNPSVHSTEVLARLEKLQSTAS
Sequences:
>Translated_185_residues MISRRNFLHILLVSCFAVISWLNLPPTAYALGGKLPPINQPAPDFTLPTNTGDGKLSLGDLRGKWVVLYFYPKDFTSGCT IEARRFQQDLPTYLDKNVQIIGVSADDIDSHAEFCDSEGLKFPLLADTDGAVSKAYGSWIGYVSMRHSFIIDPQGILRET FVKVNPSVHSTEVLARLEKLQSTAS >Mature_185_residues MISRRNFLHILLVSCFAVISWLNLPPTAYALGGKLPPINQPAPDFTLPTNTGDGKLSLGDLRGKWVVLYFYPKDFTSGCT IEARRFQQDLPTYLDKNVQIIGVSADDIDSHAEFCDSEGLKFPLLADTDGAVSKAYGSWIGYVSMRHSFIIDPQGILRET FVKVNPSVHSTEVLARLEKLQSTAS
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI5802974, Length=155, Percent_Identity=32.9032258064516, Blast_Score=74, Evalue=5e-14, Organism=Homo sapiens, GI4505591, Length=152, Percent_Identity=32.8947368421053, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI32455266, Length=152, Percent_Identity=32.8947368421053, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI32455264, Length=152, Percent_Identity=32.8947368421053, Blast_Score=72, Evalue=2e-13, Organism=Homo sapiens, GI32189392, Length=152, Percent_Identity=35.5263157894737, Blast_Score=72, Evalue=3e-13, Organism=Homo sapiens, GI32483377, Length=133, Percent_Identity=33.0827067669173, Blast_Score=70, Evalue=9e-13, Organism=Homo sapiens, GI5453549, Length=153, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=4e-12, Organism=Escherichia coli, GI1788825, Length=146, Percent_Identity=32.8767123287671, Blast_Score=82, Evalue=3e-17, Organism=Caenorhabditis elegans, GI193204376, Length=152, Percent_Identity=32.2368421052632, Blast_Score=67, Evalue=5e-12, Organism=Caenorhabditis elegans, GI32565831, Length=152, Percent_Identity=32.2368421052632, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6319407, Length=170, Percent_Identity=31.7647058823529, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI17738015, Length=153, Percent_Identity=35.9477124183007, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24656348, Length=152, Percent_Identity=36.1842105263158, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI17864676, Length=152, Percent_Identity=36.1842105263158, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI17157991, Length=155, Percent_Identity=32.258064516129, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI24641739, Length=155, Percent_Identity=32.258064516129, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI21357347, Length=141, Percent_Identity=30.4964539007092, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 20465; Mature: 20465
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRRNFLHILLVSCFAVISWLNLPPTAYALGGKLPPINQPAPDFTLPTNTGDGKLSLGD CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECC LRGKWVVLYFYPKDFTSGCTIEARRFQQDLPTYLDKNVQIIGVSADDIDSHAEFCDSEGL CCCCEEEEEEECCCCCCCCEEHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCC KFPLLADTDGAVSKAYGSWIGYVSMRHSFIIDPQGILRETFVKVNPSVHSTEVLARLEKL EEEEEECCCCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHH QSTAS HHCCC >Mature Secondary Structure MISRRNFLHILLVSCFAVISWLNLPPTAYALGGKLPPINQPAPDFTLPTNTGDGKLSLGD CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECC LRGKWVVLYFYPKDFTSGCTIEARRFQQDLPTYLDKNVQIIGVSADDIDSHAEFCDSEGL CCCCEEEEEEECCCCCCCCEEHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCC KFPLLADTDGAVSKAYGSWIGYVSMRHSFIIDPQGILRETFVKVNPSVHSTEVLARLEKL EEEEEECCCCHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHH QSTAS HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]