| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is dnaJ [H]
Identifier: 17229939
GI number: 17229939
Start: 2943360
End: 2944490
Strand: Direct
Name: dnaJ [H]
Synonym: alr2447
Alternate gene names: 17229939
Gene position: 2943360-2944490 (Clockwise)
Preceding gene: 17229938
Following gene: 17229940
Centisome position: 45.89
GC content: 46.86
Gene sequence:
>1131_bases ATGGCCCGCGACTATTATGAGATTCTAGGCGTTGCTCGTGACGCTGACAAAGAAGAAATCAAACAAGCCTACCGCCGTCT AGCCCGGAAATATCACCCTGATGTGAATAAAGAACCGGGAGCCGAAGAGCGTTTTAAGGAAATTAACCGTGCTTATGAAG TACTTTCTGAGCCGGAAACCCGCGCACGTTACGATCGCTTCGGTCCGGAAGGTGTTTCAGGTGCTGGTGTCGGCTTCCAA GATATGAGCGATATGGGTGGTTTCGCCGATATCTTTGAAAGTATTTTCAGTGGTTTTGCTGGTGGCGGTATGGGTGGCCC AACGCAGCAAAGAAGACGCGGCGGGCCAGCGCGGGGTGATGATTTACGGCTAGACCTAAAGTTAGACTTTCGAGAAGCGG TATTCGGTGGGGAAAAGGAAATTCGCATTTCCCATTTAGAAACCTGTGAAACCTGTAGTGGTTCAGGAGCAAAACCAGGA ACTCGTCCCCGCACTTGTTCGACTTGTAGCGGTTCCGGTCAAGTCCGCCGCGTCACCAGAACCCCATTTGGTAGCTTTAC TCAAGTCTCTACTTGTCCTACCTGTAATGGTACAGGCATGGTAATTGAAGACAAATGTGATACTTGTGATGGTAAGGGGA CAAATCAAGTTACCAAAAAACTAAAAATTACCATTCCCGCAGGTGTGGACAATGGTACGCGCTTACGTATCAAAGACGAA GGTGATGCGGGTCAACGTGGTGGACCTCCAGGGGATTTATATGTATACCTATTCGTCAATGAAGACGAAGAATTTCAACG GGATGGCATTAATGTTATCTCGGAAATTAAAGTTAGCTACTTGCAAGCAATTTTAGGTTGCCGGCTAGAAGTAAACACAG TAGATGGGCCTGTGGAGTTGATTATTCCTGCGGGTACTCAACCGAATACGGTGATGAAACTAGAAAATCGTGGTGTACCT CGCTTGGGGAATCCTGTTAGTCGGGGCGATCATCTGTTAACAGTATTAATTGATATCCCCACTAAAGTAATCCCTGAGGA GAGAGAATTGCTAGAGAAGCTGGCTAAAATTAAGGGAGACCGTACCGGTAAAGGTGGTCTGGAAGGATTTTTGGGAAATT TGTTTAAGTAA
Upstream 100 bases:
>100_bases TTAACATAATTTAACTTTGCCTTCTATCTAGCCCCGGCAAGTTGACCTTGTGGTGTCTACTGCCTATTGCTTTCTTCCTC CTAACCTTTACCTTTGCTAT
Downstream 100 bases:
>100_bases TGACGCTCTCTTCTGTTTCAACGCCTGATGCTCAACTTGACCTCCGTGGCACTCCTTGTCCGATTAATTTCGTGCGAACA AAACTCCGTTTGGAGAAAAT
Product: chaperone protein DnaJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MARDYYEILGVARDADKEEIKQAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPETRARYDRFGPEGVSGAGVGFQ DMSDMGGFADIFESIFSGFAGGGMGGPTQQRRRGGPARGDDLRLDLKLDFREAVFGGEKEIRISHLETCETCSGSGAKPG TRPRTCSTCSGSGQVRRVTRTPFGSFTQVSTCPTCNGTGMVIEDKCDTCDGKGTNQVTKKLKITIPAGVDNGTRLRIKDE GDAGQRGGPPGDLYVYLFVNEDEEFQRDGINVISEIKVSYLQAILGCRLEVNTVDGPVELIIPAGTQPNTVMKLENRGVP RLGNPVSRGDHLLTVLIDIPTKVIPEERELLEKLAKIKGDRTGKGGLEGFLGNLFK
Sequences:
>Translated_376_residues MARDYYEILGVARDADKEEIKQAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPETRARYDRFGPEGVSGAGVGFQ DMSDMGGFADIFESIFSGFAGGGMGGPTQQRRRGGPARGDDLRLDLKLDFREAVFGGEKEIRISHLETCETCSGSGAKPG TRPRTCSTCSGSGQVRRVTRTPFGSFTQVSTCPTCNGTGMVIEDKCDTCDGKGTNQVTKKLKITIPAGVDNGTRLRIKDE GDAGQRGGPPGDLYVYLFVNEDEEFQRDGINVISEIKVSYLQAILGCRLEVNTVDGPVELIIPAGTQPNTVMKLENRGVP RLGNPVSRGDHLLTVLIDIPTKVIPEERELLEKLAKIKGDRTGKGGLEGFLGNLFK >Mature_375_residues ARDYYEILGVARDADKEEIKQAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPETRARYDRFGPEGVSGAGVGFQD MSDMGGFADIFESIFSGFAGGGMGGPTQQRRRGGPARGDDLRLDLKLDFREAVFGGEKEIRISHLETCETCSGSGAKPGT RPRTCSTCSGSGQVRRVTRTPFGSFTQVSTCPTCNGTGMVIEDKCDTCDGKGTNQVTKKLKITIPAGVDNGTRLRIKDEG DAGQRGGPPGDLYVYLFVNEDEEFQRDGINVISEIKVSYLQAILGCRLEVNTVDGPVELIIPAGTQPNTVMKLENRGVPR LGNPVSRGDHLLTVLIDIPTKVIPEERELLEKLAKIKGDRTGKGGLEGFLGNLFK
Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon
COG id: COG0484
COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Homo sapiens, GI205360838, Length=365, Percent_Identity=33.4246575342466, Blast_Score=199, Evalue=3e-51, Organism=Homo sapiens, GI205360840, Length=365, Percent_Identity=33.4246575342466, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI5031741, Length=357, Percent_Identity=35.2941176470588, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI4504511, Length=361, Percent_Identity=30.4709141274238, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI194328758, Length=365, Percent_Identity=30.4109589041096, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI194328760, Length=365, Percent_Identity=30.4109589041096, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI6631085, Length=363, Percent_Identity=30.5785123966942, Blast_Score=132, Evalue=8e-31, Organism=Homo sapiens, GI7706495, Length=373, Percent_Identity=29.7587131367292, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI5453690, Length=402, Percent_Identity=28.6069651741293, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI39204547, Length=376, Percent_Identity=27.6595744680851, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI194328762, Length=326, Percent_Identity=26.9938650306748, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI194306642, Length=104, Percent_Identity=52.8846153846154, Blast_Score=99, Evalue=9e-21, Organism=Homo sapiens, GI194306640, Length=104, Percent_Identity=52.8846153846154, Blast_Score=99, Evalue=9e-21, Organism=Homo sapiens, GI201862587, Length=72, Percent_Identity=59.7222222222222, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI201862518, Length=72, Percent_Identity=59.7222222222222, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI56549115, Length=72, Percent_Identity=59.7222222222222, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI22749377, Length=104, Percent_Identity=49.0384615384615, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI21553335, Length=100, Percent_Identity=48, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI9558755, Length=150, Percent_Identity=36, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI56687498, Length=68, Percent_Identity=52.9411764705882, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI72534740, Length=105, Percent_Identity=46.6666666666667, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI47777312, Length=118, Percent_Identity=42.3728813559322, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI88501736, Length=108, Percent_Identity=45.3703703703704, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI27151736, Length=108, Percent_Identity=45.3703703703704, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI217035105, Length=77, Percent_Identity=49.3506493506493, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI68077168, Length=116, Percent_Identity=40.5172413793103, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI68077166, Length=116, Percent_Identity=40.5172413793103, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=54.5454545454545, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=54.5454545454545, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI24308127, Length=71, Percent_Identity=46.4788732394366, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI29126218, Length=71, Percent_Identity=49.2957746478873, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI23503241, Length=104, Percent_Identity=42.3076923076923, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI45504382, Length=71, Percent_Identity=43.6619718309859, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1786197, Length=363, Percent_Identity=43.2506887052342, Blast_Score=283, Evalue=1e-77, Organism=Escherichia coli, GI1787235, Length=362, Percent_Identity=31.4917127071823, Blast_Score=142, Evalue=5e-35, Organism=Caenorhabditis elegans, GI17553096, Length=372, Percent_Identity=31.7204301075269, Blast_Score=174, Evalue=7e-44, Organism=Caenorhabditis elegans, GI17553098, Length=372, Percent_Identity=31.7204301075269, Blast_Score=174, Evalue=8e-44, Organism=Caenorhabditis elegans, GI17507263, Length=360, Percent_Identity=31.9444444444444, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI212645553, Length=349, Percent_Identity=28.9398280802292, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17563890, Length=357, Percent_Identity=27.4509803921569, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI17534355, Length=114, Percent_Identity=45.6140350877193, Blast_Score=95, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17554644, Length=107, Percent_Identity=45.7943925233645, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115532378, Length=81, Percent_Identity=49.3827160493827, Blast_Score=81, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17538236, Length=123, Percent_Identity=40.650406504065, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI115532476, Length=65, Percent_Identity=55.3846153846154, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17554874, Length=110, Percent_Identity=36.3636363636364, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17568643, Length=69, Percent_Identity=49.2753623188406, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324265, Length=365, Percent_Identity=33.972602739726, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6321094, Length=407, Percent_Identity=32.1867321867322, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6323870, Length=318, Percent_Identity=33.9622641509434, Blast_Score=132, Evalue=9e-32, Organism=Saccharomyces cerevisiae, GI6323119, Length=379, Percent_Identity=27.4406332453826, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6324252, Length=436, Percent_Identity=25.4587155963303, Blast_Score=108, Evalue=9e-25, Organism=Saccharomyces cerevisiae, GI6323813, Length=117, Percent_Identity=47.8632478632479, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322194, Length=98, Percent_Identity=41.8367346938776, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320888, Length=96, Percent_Identity=41.6666666666667, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6324321, Length=67, Percent_Identity=46.2686567164179, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324103, Length=63, Percent_Identity=50.7936507936508, Blast_Score=63, Evalue=9e-11, Organism=Drosophila melanogaster, GI45549272, Length=390, Percent_Identity=30, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI45552813, Length=390, Percent_Identity=30, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI45552811, Length=395, Percent_Identity=29.873417721519, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI20129487, Length=349, Percent_Identity=31.8051575931232, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI24584014, Length=349, Percent_Identity=31.8051575931232, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI28574949, Length=369, Percent_Identity=27.6422764227642, Blast_Score=137, Evalue=8e-33, Organism=Drosophila melanogaster, GI24646562, Length=350, Percent_Identity=30, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24646560, Length=350, Percent_Identity=30, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24646558, Length=350, Percent_Identity=30, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24646556, Length=350, Percent_Identity=30, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI21357547, Length=350, Percent_Identity=30, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI85726398, Length=373, Percent_Identity=28.686327077748, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI19920464, Length=358, Percent_Identity=28.4916201117318, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI18858081, Length=368, Percent_Identity=26.9021739130435, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24658562, Length=72, Percent_Identity=58.3333333333333, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI24658555, Length=72, Percent_Identity=58.3333333333333, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI24668492, Length=72, Percent_Identity=51.3888888888889, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24654066, Length=115, Percent_Identity=40, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24654070, Length=115, Percent_Identity=40, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24654068, Length=115, Percent_Identity=40, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24654072, Length=115, Percent_Identity=40, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24641698, Length=65, Percent_Identity=50.7692307692308, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24641696, Length=65, Percent_Identity=50.7692307692308, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI21358273, Length=66, Percent_Identity=51.5151515151515, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI17648033, Length=112, Percent_Identity=37.5, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24584630, Length=112, Percent_Identity=37.5, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24643995, Length=64, Percent_Identity=48.4375, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI19922238, Length=77, Percent_Identity=44.1558441558442, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI17737735, Length=68, Percent_Identity=47.0588235294118, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI28574723, Length=68, Percent_Identity=47.0588235294118, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI24668523, Length=68, Percent_Identity=47.0588235294118, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=51.5625, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21355911, Length=66, Percent_Identity=50, Blast_Score=66, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012724 - InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 - InterPro: IPR001305 [H]
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]
EC number: NA
Molecular weight: Translated: 41074; Mature: 40943
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS50076 DNAJ_2 ; PS00637 DNAJ_CXXCXGXG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDYYEILGVARDADKEEIKQAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPET CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHH RARYDRFGPEGVSGAGVGFQDMSDMGGFADIFESIFSGFAGGGMGGPTQQRRRGGPARGD HHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCC DLRLDLKLDFREAVFGGEKEIRISHLETCETCSGSGAKPGTRPRTCSTCSGSGQVRRVTR CEEEEEEECHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEC TPFGSFTQVSTCPTCNGTGMVIEDKCDTCDGKGTNQVTKKLKITIPAGVDNGTRLRIKDE CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHEEEEEEEEEECCCCCCCEEEEECC GDAGQRGGPPGDLYVYLFVNEDEEFQRDGINVISEIKVSYLQAILGCRLEVNTVDGPVEL CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEE IIPAGTQPNTVMKLENRGVPRLGNPVSRGDHLLTVLIDIPTKVIPEERELLEKLAKIKGD EEECCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCC RTGKGGLEGFLGNLFK CCCCCHHHHHHHHHCC >Mature Secondary Structure ARDYYEILGVARDADKEEIKQAYRRLARKYHPDVNKEPGAEERFKEINRAYEVLSEPET CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHH RARYDRFGPEGVSGAGVGFQDMSDMGGFADIFESIFSGFAGGGMGGPTQQRRRGGPARGD HHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCC DLRLDLKLDFREAVFGGEKEIRISHLETCETCSGSGAKPGTRPRTCSTCSGSGQVRRVTR CEEEEEEECHHHHHCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEC TPFGSFTQVSTCPTCNGTGMVIEDKCDTCDGKGTNQVTKKLKITIPAGVDNGTRLRIKDE CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHEEEEEEEEEECCCCCCCEEEEECC GDAGQRGGPPGDLYVYLFVNEDEEFQRDGINVISEIKVSYLQAILGCRLEVNTVDGPVEL CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEE IIPAGTQPNTVMKLENRGVPRLGNPVSRGDHLLTVLIDIPTKVIPEERELLEKLAKIKGD EEECCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCC RTGKGGLEGFLGNLFK CCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA