| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229931
Identifier: 17229931
GI number: 17229931
Start: 2932097
End: 2932615
Strand: Reverse
Name: 17229931
Synonym: all2439
Alternate gene names: NA
Gene position: 2932615-2932097 (Counterclockwise)
Preceding gene: 17229933
Following gene: 17229930
Centisome position: 45.72
GC content: 30.25
Gene sequence:
>519_bases ATGATATCAGTATGTATCTACCTATTTTTTAACTATAACATGATTGGAAAACTTAATCACAATGTTAATGTTTCTCAGGA ATATGAGAAATTAGCACGCGAAGATGAAAAAGTCGGACTTTTACTTCAAGAACAAGGCGAACATAGACACTCAATTTATT TTCTTATCCAAGCGATGGAGAAATATGTACGAGCAAAAATATTTACTTTTGTTGACGCTAAAAATCCATACTTTAGAAAA AGAGAAAGAACCCATTCTATTGAAGATGCTTTGGATTTCTTAATTGAAGTTATAAGCGGCAATACAGTTATTAGAGAGCA AGTTAAAAATCAGTTACGTGAATATGTTGTTGGGGAAATAAAATTTAACTGGTTACACAATAATTTACGTTATCCTTTTT ATTCTGAACGCTATAATTCTTACTCATCTTTTGAGATAACGAGCCATGATAATGATGTGATTGCTCAGAAGTTAAAAGCA TTAAAAGCATTTCTTGCTGATATTGATAGATTTAGATAA
Upstream 100 bases:
>100_bases GATCCAATCAAGGAAGAGACTGAAAAAACAGATTCTTATTTACGATTACATCAAGGATAATTATGCTTTATTAATTGTTA TCTTGAACTTGGCATAGGGA
Downstream 100 bases:
>100_bases TTAAAAATTGTCTGTGTAACCGCGACTTCAGTTGCTAGAGACAGCGTAATTTTGAAAAAGTAATTGGTTGTAATGCTATC GTTCCAAGTCTTCAAAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MISVCIYLFFNYNMIGKLNHNVNVSQEYEKLAREDEKVGLLLQEQGEHRHSIYFLIQAMEKYVRAKIFTFVDAKNPYFRK RERTHSIEDALDFLIEVISGNTVIREQVKNQLREYVVGEIKFNWLHNNLRYPFYSERYNSYSSFEITSHDNDVIAQKLKA LKAFLADIDRFR
Sequences:
>Translated_172_residues MISVCIYLFFNYNMIGKLNHNVNVSQEYEKLAREDEKVGLLLQEQGEHRHSIYFLIQAMEKYVRAKIFTFVDAKNPYFRK RERTHSIEDALDFLIEVISGNTVIREQVKNQLREYVVGEIKFNWLHNNLRYPFYSERYNSYSSFEITSHDNDVIAQKLKA LKAFLADIDRFR >Mature_172_residues MISVCIYLFFNYNMIGKLNHNVNVSQEYEKLAREDEKVGLLLQEQGEHRHSIYFLIQAMEKYVRAKIFTFVDAKNPYFRK RERTHSIEDALDFLIEVISGNTVIREQVKNQLREYVVGEIKFNWLHNNLRYPFYSERYNSYSSFEITSHDNDVIAQKLKA LKAFLADIDRFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20601; Mature: 20601
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISVCIYLFFNYNMIGKLNHNVNVSQEYEKLAREDEKVGLLLQEQGEHRHSIYFLIQAME CHHEEEEEEECCCEEEECCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHH KYVRAKIFTFVDAKNPYFRKRERTHSIEDALDFLIEVISGNTVIREQVKNQLREYVVGEI HHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KFNWLHNNLRYPFYSERYNSYSSFEITSHDNDVIAQKLKALKAFLADIDRFR EEEEEECCCCCCCHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MISVCIYLFFNYNMIGKLNHNVNVSQEYEKLAREDEKVGLLLQEQGEHRHSIYFLIQAME CHHEEEEEEECCCEEEECCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHH KYVRAKIFTFVDAKNPYFRKRERTHSIEDALDFLIEVISGNTVIREQVKNQLREYVVGEI HHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KFNWLHNNLRYPFYSERYNSYSSFEITSHDNDVIAQKLKALKAFLADIDRFR EEEEEECCCCCCCHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA