| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229919
Identifier: 17229919
GI number: 17229919
Start: 2911399
End: 2911635
Strand: Direct
Name: 17229919
Synonym: asr2427
Alternate gene names: NA
Gene position: 2911399-2911635 (Clockwise)
Preceding gene: 17229918
Following gene: 17229920
Centisome position: 45.39
GC content: 37.13
Gene sequence:
>237_bases ATGTCTGAGCAAAAAACCCTCAATCCCTGGAATTATAAACCTTGGTGGTGTCAACCTTGGTCAATTTTACTCACAGGTTT AAGTTTAATTGGTGGTAGCTGGTTACTGTTAAAAATTATCTGGGTAACTGTAATTGTTGCTATCCCTGTATTAGTTTGGA TGGGATTTTTTTTGTTGATTTGGCCGCCACTAATGATTCGCAGTGGAGTTTTAGAATCTGATGAGTTGGATTCTTAA
Upstream 100 bases:
>100_bases TTATAGAAAATCAGTATATCTCTTTAGAAGCATGGACAGAGCAATTAAGACGAAGACGCTAATATTAATTGAAAATTCAA ACTAGAACAAAATATAACTT
Downstream 100 bases:
>100_bases TACAACAGTATTGCCAAATCGACTTTTTGCGATTTGCTACTGAATAATTTATTCCTAAAGATTGATAAATATTTATATTA GTTAATTAAACTTAATCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSEQKTLNPWNYKPWWCQPWSILLTGLSLIGGSWLLLKIIWVTVIVAIPVLVWMGFFLLIWPPLMIRSGVLESDELDS
Sequences:
>Translated_78_residues MSEQKTLNPWNYKPWWCQPWSILLTGLSLIGGSWLLLKIIWVTVIVAIPVLVWMGFFLLIWPPLMIRSGVLESDELDS >Mature_77_residues SEQKTLNPWNYKPWWCQPWSILLTGLSLIGGSWLLLKIIWVTVIVAIPVLVWMGFFLLIWPPLMIRSGVLESDELDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9041; Mature: 8910
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQKTLNPWNYKPWWCQPWSILLTGLSLIGGSWLLLKIIWVTVIVAIPVLVWMGFFLLI CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WPPLMIRSGVLESDELDS HHHHHHHHCCCCCCCCCC >Mature Secondary Structure SEQKTLNPWNYKPWWCQPWSILLTGLSLIGGSWLLLKIIWVTVIVAIPVLVWMGFFLLI CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WPPLMIRSGVLESDELDS HHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA