| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229891
Identifier: 17229891
GI number: 17229891
Start: 2882454
End: 2883212
Strand: Reverse
Name: 17229891
Synonym: all2399
Alternate gene names: NA
Gene position: 2883212-2882454 (Counterclockwise)
Preceding gene: 17229892
Following gene: 17229889
Centisome position: 44.95
GC content: 41.24
Gene sequence:
>759_bases ATGTCAATCGCCCAAGATTTACAACCAGTAGCAGGTATAATATTTCCACCAGGAGATATTGAAAGTGACCAACCAATAGA AGATATAATATTTCCGCCAGGAGATATTGAAAGTCACGAACCACCATTGGAAAGCGATTTACATCTACGCCAAATTATTC TGTTATTACAATGCTTAGAATTGTGGTGGCAAAACCGCAATGACTTTTATGCTGCGGGAAATCTGACAATATATTATAGC CAACGTCAACTCAAATCAGAGGACTTTCGCGGCCCTGATTTTTTTGTAGTGCAAGGATGTGAAAAGAAACCGCGCAAAAG TTGGGTGATTTGGCAAGAAGACGGTAAGTATCCCAATATCATTATTGAGTTACTATCACCTTCGACAAAAGCCACGGATA AAGATTTAAAAAAGCAAATTTATCAAGATATCTTTCGCACACCAGAATATTTTTGGTTTGACCCCAATAATTTAGAATTT GCCGGGTTTCATTTAGTAGACGCTCATTACCAACCGATAGAAGCGAATCCCCAAGGTTGGTTATGGAGTCAGCAGCTAGA TTTACATTTGGGTGTGCAGGACAATCAGTTACGCTACTTTACAGCACAAGGGGAGTTGGTGCCAACACCAGAAGAATTGG CAGCACAGGAAAAACAGCGCGCGGAACAGGAAAAACAACGCGCGGAACAAGAAAAGCAACGTGCGGAACGCCTAGCCGCT AAGTTGCGAGAATTGAATATTGACCCTGATAATCTCTAA
Upstream 100 bases:
>100_bases AGATTCGATCATAGCTGAGAACTAGAGATCAGCCAGATTATGATAGTAATAACACCTGTGCATCCAATCCTCGCATATCA CCCTTAGCCCCAATTAAGTC
Downstream 100 bases:
>100_bases AATGTGAGTTTTTCGTCAATAGTAGAGAAGCTACATAGGATGTATCTACTTATCTTAAAATTCCTGCGAGGATATCCAGG CTGGTTTGGATTTGTTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSIAQDLQPVAGIIFPPGDIESDQPIEDIIFPPGDIESHEPPLESDLHLRQIILLLQCLELWWQNRNDFYAAGNLTIYYS QRQLKSEDFRGPDFFVVQGCEKKPRKSWVIWQEDGKYPNIIIELLSPSTKATDKDLKKQIYQDIFRTPEYFWFDPNNLEF AGFHLVDAHYQPIEANPQGWLWSQQLDLHLGVQDNQLRYFTAQGELVPTPEELAAQEKQRAEQEKQRAEQEKQRAERLAA KLRELNIDPDNL
Sequences:
>Translated_252_residues MSIAQDLQPVAGIIFPPGDIESDQPIEDIIFPPGDIESHEPPLESDLHLRQIILLLQCLELWWQNRNDFYAAGNLTIYYS QRQLKSEDFRGPDFFVVQGCEKKPRKSWVIWQEDGKYPNIIIELLSPSTKATDKDLKKQIYQDIFRTPEYFWFDPNNLEF AGFHLVDAHYQPIEANPQGWLWSQQLDLHLGVQDNQLRYFTAQGELVPTPEELAAQEKQRAEQEKQRAEQEKQRAERLAA KLRELNIDPDNL >Mature_251_residues SIAQDLQPVAGIIFPPGDIESDQPIEDIIFPPGDIESHEPPLESDLHLRQIILLLQCLELWWQNRNDFYAAGNLTIYYSQ RQLKSEDFRGPDFFVVQGCEKKPRKSWVIWQEDGKYPNIIIELLSPSTKATDKDLKKQIYQDIFRTPEYFWFDPNNLEFA GFHLVDAHYQPIEANPQGWLWSQQLDLHLGVQDNQLRYFTAQGELVPTPEELAAQEKQRAEQEKQRAEQEKQRAERLAAK LRELNIDPDNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29444; Mature: 29313
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAQDLQPVAGIIFPPGDIESDQPIEDIIFPPGDIESHEPPLESDLHLRQIILLLQCLE CCCHHHHHHHHEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LWWQNRNDFYAAGNLTIYYSQRQLKSEDFRGPDFFVVQGCEKKPRKSWVIWQEDGKYPNI HHHCCCCCEEEECCEEEEECCHHHCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCEE IIELLSPSTKATDKDLKKQIYQDIFRTPEYFWFDPNNLEFAGFHLVDAHYQPIEANPQGW EEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCC LWSQQLDLHLGVQDNQLRYFTAQGELVPTPEELAAQEKQRAEQEKQRAEQEKQRAERLAA EEECCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLRELNIDPDNL HHHHCCCCCCCC >Mature Secondary Structure SIAQDLQPVAGIIFPPGDIESDQPIEDIIFPPGDIESHEPPLESDLHLRQIILLLQCLE CCHHHHHHHHEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LWWQNRNDFYAAGNLTIYYSQRQLKSEDFRGPDFFVVQGCEKKPRKSWVIWQEDGKYPNI HHHCCCCCEEEECCEEEEECCHHHCCCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCEE IIELLSPSTKATDKDLKKQIYQDIFRTPEYFWFDPNNLEFAGFHLVDAHYQPIEANPQGW EEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCC LWSQQLDLHLGVQDNQLRYFTAQGELVPTPEELAAQEKQRAEQEKQRAEQEKQRAERLAA EEECCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLRELNIDPDNL HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA