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The map label for this gene is crtQ

Identifier: 17229874

GI number: 17229874

Start: 2865888

End: 2867327

Strand: Reverse

Name: crtQ

Synonym: all2382

Alternate gene names: 17229874

Gene position: 2867327-2865888 (Counterclockwise)

Preceding gene: 17229875

Following gene: 17229873

Centisome position: 44.71

GC content: 44.51

Gene sequence:

>1440_bases
ATGCGCGTTGCAATCGTAGGAGCGGGATTGGCTGGGCTAGCAACCGCTATAGATTTAGCTGATGCTGGCTGTGAAGTCCA
AATTTTTGAATCCCGTCCGTTTGTTGGTGGTAAAGTTGGCAGTTGGATTGATGGCGATGGTAATCACGTTGAAATGGGTT
TGCACGTTTTTTTCGGGTGCTACTACCAACTATTTGAACTCATGAATAAGGTGGGGGCGTTTTCCCATTTACGCCTCAAA
GAACATACCCACACCTTTGTCAACAAAGGGGGACGGACAGGTGCTTTGGATTTTCGTTTCTTTACGGGTGCGCCCTTCAA
TGGGTTGAAAGCGTTTTTTACCACCTCTCAACTCTCATTACAGGATAAACTGCAAAATGCGATCGCTCTAGGTACAAGCC
CCATTGTGCGTGGATTAGTAGATTTTGAAGGGGCAATGAAAACCATCCGCAACCTAGATAAAATTAGCTTTGCCGATTGG
TTTCGCAGTCACGGCGGTAGTAATGGTAGCATTAAACGAATGTGGAACCCCATTGCCTATGCCTTGGGATTTATTGACTG
TGAAAATATCTCCGCTCGTTGTATGTTAACAATCTTCCAATTCTTCGCAGTTAGAAGCGAAGCCTCTGTACTGCGAATGT
TGGAAGGTTCGCCTGATGAATATTTACATCAGCCCATTCTCAGGTATTTAGAAGCTAGGGGAACAAAAGTTTATACTCGT
CGGCAAGTACGGGAAATTAAGTATGCTGAAGCAGAAGGGCAAACTCGCGTTACTGGTATAGTAGTAGCCAAAGGTGATGA
AGTAGAAGAAATTACCGCAGATGCCTACGTTTGTGCTTGCGATATTCCTGGAATACAGCGAGTTTTACCTCAAGAATGGC
GGAAATGGTCGGAATTTGATAACATTTATAAGCTAGATGCAGTACCCGTTGCCACTGTGCAGATGAGATTTGATGGCTGG
GTAACAGAACTGCAAGATGAAAATAAACGCAAACAGCTAAAAGAGGCTGCCGGTCTAGATAATTTGCTCTATACCGCAGA
TGCTGACTTTTCCTGTTTTGCTGATTTAGCTTTGACTAGTCCTAGTGATTATTATCGTCAAGGTCAAGGGTCGTTGTTGC
AACTGGTATTGACCCCAGGAGACCCATTTATCAAAGAAAGTAACGAAGCGATCGCCCAACACGTTCTTAAACAAGTATAT
GAACTGTTCCCCTCATCACGGGAGCTAAACATGACTTGGTACAGTGTAGTCAAGCTGGCTCAATCTCTCTACCGAGAAGC
CCCAGGTATGGATGTTTACCGTCCTAACCAAAAAACTCCTATAGCCAATTTCTTTCTGGCGGGTAGTTATACGCAGCAAG
ACTACATCGACAGCATGGAAGGGGCAACAGTTTCAGGACGGCGGGCGGCAAAAGTCATCCTAGATAATATTAAAAAATAG

Upstream 100 bases:

>100_bases
CTTTGTTGTCTTTCAATACACTGCTGAAATTTATATAACTAGCAAATTCCGACACCAAGCCAGTTACAATTTGTAAAGAA
GCTGAAGAAGGAAGAACGGA

Downstream 100 bases:

>100_bases
AGTTAGAACTGCTAATCTAATCAAATCTCAAATCCGAAATAGAATGTCTAACTGGCTAGAACATAGCGTACAGGTAGAAG
TGGAAGCCCCTATAGATTTA

Product: zeta-carotene desaturase

Products: NA

Alternate protein names: Carotene 7,8-desaturase

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MRVAIVGAGLAGLATAIDLADAGCEVQIFESRPFVGGKVGSWIDGDGNHVEMGLHVFFGCYYQLFELMNKVGAFSHLRLK
EHTHTFVNKGGRTGALDFRFFTGAPFNGLKAFFTTSQLSLQDKLQNAIALGTSPIVRGLVDFEGAMKTIRNLDKISFADW
FRSHGGSNGSIKRMWNPIAYALGFIDCENISARCMLTIFQFFAVRSEASVLRMLEGSPDEYLHQPILRYLEARGTKVYTR
RQVREIKYAEAEGQTRVTGIVVAKGDEVEEITADAYVCACDIPGIQRVLPQEWRKWSEFDNIYKLDAVPVATVQMRFDGW
VTELQDENKRKQLKEAAGLDNLLYTADADFSCFADLALTSPSDYYRQGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQVY
ELFPSSRELNMTWYSVVKLAQSLYREAPGMDVYRPNQKTPIANFFLAGSYTQQDYIDSMEGATVSGRRAAKVILDNIKK

Sequences:

>Translated_479_residues
MRVAIVGAGLAGLATAIDLADAGCEVQIFESRPFVGGKVGSWIDGDGNHVEMGLHVFFGCYYQLFELMNKVGAFSHLRLK
EHTHTFVNKGGRTGALDFRFFTGAPFNGLKAFFTTSQLSLQDKLQNAIALGTSPIVRGLVDFEGAMKTIRNLDKISFADW
FRSHGGSNGSIKRMWNPIAYALGFIDCENISARCMLTIFQFFAVRSEASVLRMLEGSPDEYLHQPILRYLEARGTKVYTR
RQVREIKYAEAEGQTRVTGIVVAKGDEVEEITADAYVCACDIPGIQRVLPQEWRKWSEFDNIYKLDAVPVATVQMRFDGW
VTELQDENKRKQLKEAAGLDNLLYTADADFSCFADLALTSPSDYYRQGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQVY
ELFPSSRELNMTWYSVVKLAQSLYREAPGMDVYRPNQKTPIANFFLAGSYTQQDYIDSMEGATVSGRRAAKVILDNIKK
>Mature_479_residues
MRVAIVGAGLAGLATAIDLADAGCEVQIFESRPFVGGKVGSWIDGDGNHVEMGLHVFFGCYYQLFELMNKVGAFSHLRLK
EHTHTFVNKGGRTGALDFRFFTGAPFNGLKAFFTTSQLSLQDKLQNAIALGTSPIVRGLVDFEGAMKTIRNLDKISFADW
FRSHGGSNGSIKRMWNPIAYALGFIDCENISARCMLTIFQFFAVRSEASVLRMLEGSPDEYLHQPILRYLEARGTKVYTR
RQVREIKYAEAEGQTRVTGIVVAKGDEVEEITADAYVCACDIPGIQRVLPQEWRKWSEFDNIYKLDAVPVATVQMRFDGW
VTELQDENKRKQLKEAAGLDNLLYTADADFSCFADLALTSPSDYYRQGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQVY
ELFPSSRELNMTWYSVVKLAQSLYREAPGMDVYRPNQKTPIANFFLAGSYTQQDYIDSMEGATVSGRRAAKVILDNIKK

Specific function: Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'

COG id: COG3349

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zeta carotene desaturase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ZDS_NOSS1 (Q9R6X4)

Other databases:

- EMBL:   Y15115
- EMBL:   BA000019
- PIR:   AG2103
- RefSeq:   NP_486422.1
- ProteinModelPortal:   Q9R6X4
- STRING:   Q9R6X4
- GeneID:   1105979
- GenomeReviews:   BA000019_GR
- KEGG:   ana:all2382
- NMPDR:   fig|103690.1.peg.2689
- eggNOG:   COG3349
- HOGENOM:   HBG286164
- OMA:   CMLTIFM
- ProtClustDB:   CLSK893014
- BioCyc:   NSP103690:ALL2382-MONOMER
- GO:   GO:0005488
- InterPro:   IPR002937
- InterPro:   IPR014103
- InterPro:   IPR016040
- Gene3D:   G3DSA:3.40.50.720
- TIGRFAMs:   TIGR02732

Pfam domain/function: PF01593 Amino_oxidase

EC number: =1.14.99.30

Molecular weight: Translated: 53580; Mature: 53580

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAIVGAGLAGLATAIDLADAGCEVQIFESRPFVGGKVGSWIDGDGNHVEMGLHVFFGC
CEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHH
YYQLFELMNKVGAFSHLRLKEHTHTFVNKGGRTGALDFRFFTGAPFNGLKAFFTTSQLSL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
QDKLQNAIALGTSPIVRGLVDFEGAMKTIRNLDKISFADWFRSHGGSNGSIKRMWNPIAY
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ALGFIDCENISARCMLTIFQFFAVRSEASVLRMLEGSPDEYLHQPILRYLEARGTKVYTR
HHHCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHH
RQVREIKYAEAEGQTRVTGIVVAKGDEVEEITADAYVCACDIPGIQRVLPQEWRKWSEFD
HHHHHHHHHCCCCCEEEEEEEEECCCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHC
NIYKLDAVPVATVQMRFDGWVTELQDENKRKQLKEAAGLDNLLYTADADFSCFADLALTS
CEEEECCCEEEEEEEEECCHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCC
PSDYYRQGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQVYELFPSSRELNMTWYSVVKLA
CHHHHHCCCCCEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
QSLYREAPGMDVYRPNQKTPIANFFLAGSYTQQDYIDSMEGATVSGRRAAKVILDNIKK
HHHHHHCCCCCCCCCCCCCCHHHEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRVAIVGAGLAGLATAIDLADAGCEVQIFESRPFVGGKVGSWIDGDGNHVEMGLHVFFGC
CEEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHH
YYQLFELMNKVGAFSHLRLKEHTHTFVNKGGRTGALDFRFFTGAPFNGLKAFFTTSQLSL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
QDKLQNAIALGTSPIVRGLVDFEGAMKTIRNLDKISFADWFRSHGGSNGSIKRMWNPIAY
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
ALGFIDCENISARCMLTIFQFFAVRSEASVLRMLEGSPDEYLHQPILRYLEARGTKVYTR
HHHCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHH
RQVREIKYAEAEGQTRVTGIVVAKGDEVEEITADAYVCACDIPGIQRVLPQEWRKWSEFD
HHHHHHHHHCCCCCEEEEEEEEECCCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHC
NIYKLDAVPVATVQMRFDGWVTELQDENKRKQLKEAAGLDNLLYTADADFSCFADLALTS
CEEEECCCEEEEEEEEECCHHHHHHCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCC
PSDYYRQGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQVYELFPSSRELNMTWYSVVKLA
CHHHHHCCCCCEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
QSLYREAPGMDVYRPNQKTPIANFFLAGSYTQQDYIDSMEGATVSGRRAAKVILDNIKK
HHHHHHCCCCCCCCCCCCCCHHHEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840