| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is bcp [H]
Identifier: 17229867
GI number: 17229867
Start: 2856989
End: 2857426
Strand: Reverse
Name: bcp [H]
Synonym: all2375
Alternate gene names: 17229867
Gene position: 2857426-2856989 (Counterclockwise)
Preceding gene: 17229871
Following gene: 17229863
Centisome position: 44.55
GC content: 44.06
Gene sequence:
>438_bases ATGCCTCTAGCGGTTGGTACGGATGCACCTGCATTTACCGTCAAAGATACCAACGGTAACACCGTTTCGTTATCTGATTT TGCTGGGAAGACAGTGGTTTTGTATTTTTACCCCAAAGATGATACACCAGGCTGCACTAAACAAGCTTGTAGCTTCCGTG ATGCTCAATCTGATTACAAAAACAAGGATGTAGTTGTTTTGGGTGTGAGTGCTGATGATGAAGGTTCTCATCAAGCATTT ACCCAAAAATATAATTTGAATTTTCCCTTGCTGGCTGACACGAATAAAACCTTAATCAGCGCTTACGATGTTGACGGCGG CGGTTATGCCAAGCGTGTCACTTACGTAATTGGCCCCGACGGTAAAATTGTTCATGTTGATGCGAGTGTCAACACAACAA CCCATGCTGGCGATGTTTTAGCGGCTTTGGGACTGTAA
Upstream 100 bases:
>100_bases ATTTTTCCCAGTCACCAGTTTCCTAAGATTGTCATGAAAGTATTGTAAATTATTGTAAAATTTCAAAGTCATCAAAAATC TGAAACAGGAAAGGTTCATT
Downstream 100 bases:
>100_bases GTTAAGTGCTGAGTAGTGAGTAAGGAGTCATGACTTTTGATTTTTCTCTTACTCCCTACTCCCTAGATTAATTGTTACCA GGGATAGTCAAAGTTGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MPLAVGTDAPAFTVKDTNGNTVSLSDFAGKTVVLYFYPKDDTPGCTKQACSFRDAQSDYKNKDVVVLGVSADDEGSHQAF TQKYNLNFPLLADTNKTLISAYDVDGGGYAKRVTYVIGPDGKIVHVDASVNTTTHAGDVLAALGL
Sequences:
>Translated_145_residues MPLAVGTDAPAFTVKDTNGNTVSLSDFAGKTVVLYFYPKDDTPGCTKQACSFRDAQSDYKNKDVVVLGVSADDEGSHQAF TQKYNLNFPLLADTNKTLISAYDVDGGGYAKRVTYVIGPDGKIVHVDASVNTTTHAGDVLAALGL >Mature_144_residues PLAVGTDAPAFTVKDTNGNTVSLSDFAGKTVVLYFYPKDDTPGCTKQACSFRDAQSDYKNKDVVVLGVSADDEGSHQAFT QKYNLNFPLLADTNKTLISAYDVDGGGYAKRVTYVIGPDGKIVHVDASVNTTTHAGDVLAALGL
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI5802974, Length=140, Percent_Identity=35.7142857142857, Blast_Score=68, Evalue=3e-12, Organism=Homo sapiens, GI32189392, Length=153, Percent_Identity=35.9477124183007, Blast_Score=67, Evalue=4e-12, Organism=Homo sapiens, GI32483377, Length=119, Percent_Identity=36.9747899159664, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1788825, Length=150, Percent_Identity=39.3333333333333, Blast_Score=106, Evalue=8e-25, Organism=Caenorhabditis elegans, GI193204376, Length=134, Percent_Identity=35.0746268656716, Blast_Score=69, Evalue=8e-13, Organism=Caenorhabditis elegans, GI32565831, Length=134, Percent_Identity=35.0746268656716, Blast_Score=69, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6322180, Length=99, Percent_Identity=36.3636363636364, Blast_Score=71, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6319407, Length=139, Percent_Identity=29.4964028776978, Blast_Score=63, Evalue=2e-11, Organism=Drosophila melanogaster, GI17738015, Length=135, Percent_Identity=35.5555555555556, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 15341; Mature: 15210
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLAVGTDAPAFTVKDTNGNTVSLSDFAGKTVVLYFYPKDDTPGCTKQACSFRDAQSDYK CCEECCCCCCEEEEECCCCCEEEECCCCCCEEEEEEEECCCCCCCCHHHCCCCCCCCCCC NKDVVVLGVSADDEGSHQAFTQKYNLNFPLLADTNKTLISAYDVDGGGYAKRVTYVIGPD CCCEEEEEECCCCCCCCCEEEEEECCCCCEEECCCCEEEEEEECCCCCCEEEEEEEECCC GKIVHVDASVNTTTHAGDVLAALGL CEEEEEECCCCCCCCCCCEEEECCC >Mature Secondary Structure PLAVGTDAPAFTVKDTNGNTVSLSDFAGKTVVLYFYPKDDTPGCTKQACSFRDAQSDYK CEECCCCCCEEEEECCCCCEEEECCCCCCEEEEEEEECCCCCCCCHHHCCCCCCCCCCC NKDVVVLGVSADDEGSHQAFTQKYNLNFPLLADTNKTLISAYDVDGGGYAKRVTYVIGPD CCCEEEEEECCCCCCCCCEEEEEECCCCCEEECCCCEEEEEEECCCCCCEEEEEEEECCC GKIVHVDASVNTTTHAGDVLAALGL CEEEEEECCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]