Click here to switch to the map view.

The map label for this gene is nlpD [C]

Identifier: 17229854

GI number: 17229854

Start: 2845634

End: 2845867

Strand: Reverse

Name: nlpD [C]

Synonym: asl2362

Alternate gene names: 17229854

Gene position: 2845867-2845634 (Counterclockwise)

Preceding gene: 17229856

Following gene: 17229852

Centisome position: 44.37

GC content: 46.58

Gene sequence:

>234_bases
GTGATTTTTGCTGGTTGGTATGGCGGTTATGGTAGAACTGTGATTATTAATCACGGCGGTGGTATCACAACACTGTATGG
ACACGCCAGTGAATTATATGTTTCCGAGGGGCAAACAGTACAACGAGGACAGGCGATCGCCTCTGTTGGTTCTACAGGCT
TATCTACTGGGCCACATCTGCATTTTGAAGTTCGTCGCAATGGTACACCAGTCAACCCAGCAGATTATCTTTAG

Upstream 100 bases:

>100_bases
TTGGCGGGTACACCCCATTCTCGGCTATCGCAGATTTCACGCCGGGTTAGATTTTGCCGCTAGTTATGGCAGTACAATCA
GGGCAGCCGATTCGGGAACA

Downstream 100 bases:

>100_bases
CCCAAAATCTTCTGGAGCATGATATAATTAGCCAGTACGAGGGCGCGTAGCTCAGTGGATAGAGCAACAGATTCCGGTTC
TGTGGGTCGGGGGTTCAAAT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MIFAGWYGGYGRTVIINHGGGITTLYGHASELYVSEGQTVQRGQAIASVGSTGLSTGPHLHFEVRRNGTPVNPADYL

Sequences:

>Translated_77_residues
MIFAGWYGGYGRTVIINHGGGITTLYGHASELYVSEGQTVQRGQAIASVGSTGLSTGPHLHFEVRRNGTPVNPADYL
>Mature_77_residues
MIFAGWYGGYGRTVIINHGGGITTLYGHASELYVSEGQTVQRGQAIASVGSTGLSTGPHLHFEVRRNGTPVNPADYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=77, Percent_Identity=46.7532467532467, Blast_Score=74, Evalue=2e-15,
Organism=Escherichia coli, GI87081989, Length=73, Percent_Identity=47.945205479452, Blast_Score=64, Evalue=2e-12,
Organism=Escherichia coli, GI1789099, Length=69, Percent_Identity=46.3768115942029, Blast_Score=62, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 8163; Mature: 8163

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFAGWYGGYGRTVIINHGGGITTLYGHASELYVSEGQTVQRGQAIASVGSTGLSTGPHL
CEEEEEECCCCCEEEEECCCCEEEEECCCEEEEECCCCEECCCCEEECCCCCCCCCCCEE
HFEVRRNGTPVNPADYL
EEEEECCCCCCCCCCCC
>Mature Secondary Structure
MIFAGWYGGYGRTVIINHGGGITTLYGHASELYVSEGQTVQRGQAIASVGSTGLSTGPHL
CEEEEEECCCCCEEEEECCCCEEEEECCCEEEEECCCCEECCCCEEECCCCCCCCCCCEE
HFEVRRNGTPVNPADYL
EEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]