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The map label for this gene is 17229752

Identifier: 17229752

GI number: 17229752

Start: 2719487

End: 2720389

Strand: Reverse

Name: 17229752

Synonym: all2260

Alternate gene names: NA

Gene position: 2720389-2719487 (Counterclockwise)

Preceding gene: 17229754

Following gene: 17229746

Centisome position: 42.41

GC content: 37.43

Gene sequence:

>903_bases
ATGTTAAAAAAAATAAAGATCGGTACAAAATTCAACTTACTATTAACTATCGTTTTTATCATTAGCATTGTAGTAAGTGG
GGCTGCTTTATCCAGCATACTCCAGAATCGAGCGCAAACAGAAGTAATTTCCAAAGCTTTGGTGCTTTTAAACACAATGA
CTTCTGTAAGACAATATACACAAGATAGAGTCAGAAATTTGCTGTTGCCTCAACTAGAGACTCAAGCAGCCTTTATTCCA
GAAACAGTTCCCGCTTTCTCTGCAACAGAAGTATTTGAAAACTTACGCAAAAATGAACAGTATCAAAATTTCTTTTATAA
AGAAGCTACACTGAACCCAACTAATTTACGAGACAAAGCCGATAGCTATGAAGCGGCGATCGTGGAACGCTTTCGCAAGA
ATCCTTCACTGCCAGAAATTGCTAGCTTCCGTACTTTGCCTGAAGGCACGGTATTTTATATTGCCAGACCATTGGCCGTG
AAAGAACAAAGTTGTCTGCAATGCCACTCTACACCAGAAAAAGCACCCAAGAGCCAATTGGTAACTTATGGTTCAGAAAA
TGGTTTTGGGTGGCAACTGAATGAGATTGTCGCAGCTCAGATTATCTCTGTTCCTTCAGAAGAAGTCTTTAATAATGCCC
AAAGTACTTGGTTAGGAATTATGGCGTTTTTGGTTGTTATCTTTGCCATAGTTGTGATTATAATTAACTTCCTCATTAAG
AAAACCGTAATTCAGCGCATTAGAAAAATTGAAAACATCGCGCAAAGAGTCAGCACTGGAGACATGAGTGCAGAATTTGA
AGATAAAACTAATGATGAAATTGGTGGTTTAGCAGCAGCTTTTAATCGTATGAAATATAGCTTAACAATAGCTATGGATA
TGCTAAACAAACAAAATGAATGA

Upstream 100 bases:

>100_bases
ACTAACTTTAATTAATAAACTATCTTGCTTTTATAAGCTATCTTCGCTAAAGTATTTTACTACAATCCTTGATAAAGCTT
TATCTAAAAAATTTACACTA

Downstream 100 bases:

>100_bases
ATACTATATATTAAGGAACTTTCAGATAAAAAAAATATCCAAAATGTAGGGTGCTTCAGTTCCTCATGAACCTAAGCATA
ATCTAATACAGTTTAGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Sensor With HAMP Domain; Sensor With HAMP Domain Protein; Histidine Kinase; Integral Membrane Sensor Hybrid Histidine Kinase; Sensor Histidine Kinase; Multi-Sensor Signal Transduction Histidine Kinase; Hpt Sensor Hybrid Histidine Kinase; HAMP Domain Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; Two-Component Sensor Histidine Kinase; Histidine Kinase Domain-Containing Protein; Inner Membrane Protein YcdT; HAMP Domain-Containing Protein; Histidine Kinase HAMP Region Domain-Containing Protein; PAS/PAC Sensor Protein; Sensor Histidine Kinase/Response Regulator

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MLKKIKIGTKFNLLLTIVFIISIVVSGAALSSILQNRAQTEVISKALVLLNTMTSVRQYTQDRVRNLLLPQLETQAAFIP
ETVPAFSATEVFENLRKNEQYQNFFYKEATLNPTNLRDKADSYEAAIVERFRKNPSLPEIASFRTLPEGTVFYIARPLAV
KEQSCLQCHSTPEKAPKSQLVTYGSENGFGWQLNEIVAAQIISVPSEEVFNNAQSTWLGIMAFLVVIFAIVVIIINFLIK
KTVIQRIRKIENIAQRVSTGDMSAEFEDKTNDEIGGLAAAFNRMKYSLTIAMDMLNKQNE

Sequences:

>Translated_300_residues
MLKKIKIGTKFNLLLTIVFIISIVVSGAALSSILQNRAQTEVISKALVLLNTMTSVRQYTQDRVRNLLLPQLETQAAFIP
ETVPAFSATEVFENLRKNEQYQNFFYKEATLNPTNLRDKADSYEAAIVERFRKNPSLPEIASFRTLPEGTVFYIARPLAV
KEQSCLQCHSTPEKAPKSQLVTYGSENGFGWQLNEIVAAQIISVPSEEVFNNAQSTWLGIMAFLVVIFAIVVIIINFLIK
KTVIQRIRKIENIAQRVSTGDMSAEFEDKTNDEIGGLAAAFNRMKYSLTIAMDMLNKQNE
>Mature_300_residues
MLKKIKIGTKFNLLLTIVFIISIVVSGAALSSILQNRAQTEVISKALVLLNTMTSVRQYTQDRVRNLLLPQLETQAAFIP
ETVPAFSATEVFENLRKNEQYQNFFYKEATLNPTNLRDKADSYEAAIVERFRKNPSLPEIASFRTLPEGTVFYIARPLAV
KEQSCLQCHSTPEKAPKSQLVTYGSENGFGWQLNEIVAAQIISVPSEEVFNNAQSTWLGIMAFLVVIFAIVVIIINFLIK
KTVIQRIRKIENIAQRVSTGDMSAEFEDKTNDEIGGLAAAFNRMKYSLTIAMDMLNKQNE

Specific function: Unknown

COG id: COG2770

COG function: function code T; FOG: HAMP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33737; Mature: 33737

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKIKIGTKFNLLLTIVFIISIVVSGAALSSILQNRAQTEVISKALVLLNTMTSVRQYT
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QDRVRNLLLPQLETQAAFIPETVPAFSATEVFENLRKNEQYQNFFYKEATLNPTNLRDKA
HHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHH
DSYEAAIVERFRKNPSLPEIASFRTLPEGTVFYIARPLAVKEQSCLQCHSTPEKAPKSQL
HHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHE
VTYGSENGFGWQLNEIVAAQIISVPSEEVFNNAQSTWLGIMAFLVVIFAIVVIIINFLIK
EECCCCCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTVIQRIRKIENIAQRVSTGDMSAEFEDKTNDEIGGLAAAFNRMKYSLTIAMDMLNKQNE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKKIKIGTKFNLLLTIVFIISIVVSGAALSSILQNRAQTEVISKALVLLNTMTSVRQYT
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QDRVRNLLLPQLETQAAFIPETVPAFSATEVFENLRKNEQYQNFFYKEATLNPTNLRDKA
HHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHH
DSYEAAIVERFRKNPSLPEIASFRTLPEGTVFYIARPLAVKEQSCLQCHSTPEKAPKSQL
HHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHE
VTYGSENGFGWQLNEIVAAQIISVPSEEVFNNAQSTWLGIMAFLVVIFAIVVIIINFLIK
EECCCCCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTVIQRIRKIENIAQRVSTGDMSAEFEDKTNDEIGGLAAAFNRMKYSLTIAMDMLNKQNE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA