| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229738
Identifier: 17229738
GI number: 17229738
Start: 2701151
End: 2701492
Strand: Direct
Name: 17229738
Synonym: alr2246
Alternate gene names: NA
Gene position: 2701151-2701492 (Clockwise)
Preceding gene: 17229734
Following gene: 17229747
Centisome position: 42.11
GC content: 33.33
Gene sequence:
>342_bases ATGCTATCAATTATTCAGGTATTTCCAATGACAAAAGTACGTAATCGGGGCATAATCAGACCTAAAATCACTACAATGCC TAGAAATAAATCTGAGGCTTCCAGTCAATTAGAACTTTACAAATTAGTAACAGAACAACAGAGAATTAAACAAGAGTTGG CTTTTATCGAACAGAGGACAGTACTACTTAAGCAACGATTATCTACGCTTAAAACCCAGATAGAAGGTACAGAAAGGAGT ATTAATCATTTGCGTCATTCTGAGCTAAAATATTCTCGGATAGCACTACCAAAAATATTCAGTGAAACTAATAATTACCA AGCATTTGATATCGAATATTAA
Upstream 100 bases:
>100_bases ATATTCTATTTTATTGCTGCCAGAACAAATATCTTGTCATAGAAATATAAAAACATCTGAATTTGATTAAACTATTTACA TCTTTAAAATCTTAGTTATA
Downstream 100 bases:
>100_bases ACTATTAACCCGCGAAAGCGGGTTTTTAATAGTTTAATTTAACTGATTAAGTAGCTAAGTGTACATAAATCAAAGTTTGT AAGAAAAACTTGTCCCTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MLSIIQVFPMTKVRNRGIIRPKITTMPRNKSEASSQLELYKLVTEQQRIKQELAFIEQRTVLLKQRLSTLKTQIEGTERS INHLRHSELKYSRIALPKIFSETNNYQAFDIEY
Sequences:
>Translated_113_residues MLSIIQVFPMTKVRNRGIIRPKITTMPRNKSEASSQLELYKLVTEQQRIKQELAFIEQRTVLLKQRLSTLKTQIEGTERS INHLRHSELKYSRIALPKIFSETNNYQAFDIEY >Mature_113_residues MLSIIQVFPMTKVRNRGIIRPKITTMPRNKSEASSQLELYKLVTEQQRIKQELAFIEQRTVLLKQRLSTLKTQIEGTERS INHLRHSELKYSRIALPKIFSETNNYQAFDIEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13366; Mature: 13366
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSIIQVFPMTKVRNRGIIRPKITTMPRNKSEASSQLELYKLVTEQQRIKQELAFIEQRT CCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLLKQRLSTLKTQIEGTERSINHLRHSELKYSRIALPKIFSETNNYQAFDIEY HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC >Mature Secondary Structure MLSIIQVFPMTKVRNRGIIRPKITTMPRNKSEASSQLELYKLVTEQQRIKQELAFIEQRT CCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLLKQRLSTLKTQIEGTERSINHLRHSELKYSRIALPKIFSETNNYQAFDIEY HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA