Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17229738

Identifier: 17229738

GI number: 17229738

Start: 2701151

End: 2701492

Strand: Direct

Name: 17229738

Synonym: alr2246

Alternate gene names: NA

Gene position: 2701151-2701492 (Clockwise)

Preceding gene: 17229734

Following gene: 17229747

Centisome position: 42.11

GC content: 33.33

Gene sequence:

>342_bases
ATGCTATCAATTATTCAGGTATTTCCAATGACAAAAGTACGTAATCGGGGCATAATCAGACCTAAAATCACTACAATGCC
TAGAAATAAATCTGAGGCTTCCAGTCAATTAGAACTTTACAAATTAGTAACAGAACAACAGAGAATTAAACAAGAGTTGG
CTTTTATCGAACAGAGGACAGTACTACTTAAGCAACGATTATCTACGCTTAAAACCCAGATAGAAGGTACAGAAAGGAGT
ATTAATCATTTGCGTCATTCTGAGCTAAAATATTCTCGGATAGCACTACCAAAAATATTCAGTGAAACTAATAATTACCA
AGCATTTGATATCGAATATTAA

Upstream 100 bases:

>100_bases
ATATTCTATTTTATTGCTGCCAGAACAAATATCTTGTCATAGAAATATAAAAACATCTGAATTTGATTAAACTATTTACA
TCTTTAAAATCTTAGTTATA

Downstream 100 bases:

>100_bases
ACTATTAACCCGCGAAAGCGGGTTTTTAATAGTTTAATTTAACTGATTAAGTAGCTAAGTGTACATAAATCAAAGTTTGT
AAGAAAAACTTGTCCCTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MLSIIQVFPMTKVRNRGIIRPKITTMPRNKSEASSQLELYKLVTEQQRIKQELAFIEQRTVLLKQRLSTLKTQIEGTERS
INHLRHSELKYSRIALPKIFSETNNYQAFDIEY

Sequences:

>Translated_113_residues
MLSIIQVFPMTKVRNRGIIRPKITTMPRNKSEASSQLELYKLVTEQQRIKQELAFIEQRTVLLKQRLSTLKTQIEGTERS
INHLRHSELKYSRIALPKIFSETNNYQAFDIEY
>Mature_113_residues
MLSIIQVFPMTKVRNRGIIRPKITTMPRNKSEASSQLELYKLVTEQQRIKQELAFIEQRTVLLKQRLSTLKTQIEGTERS
INHLRHSELKYSRIALPKIFSETNNYQAFDIEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13366; Mature: 13366

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSIIQVFPMTKVRNRGIIRPKITTMPRNKSEASSQLELYKLVTEQQRIKQELAFIEQRT
CCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLKQRLSTLKTQIEGTERSINHLRHSELKYSRIALPKIFSETNNYQAFDIEY
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
>Mature Secondary Structure
MLSIIQVFPMTKVRNRGIIRPKITTMPRNKSEASSQLELYKLVTEQQRIKQELAFIEQRT
CCCHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLKQRLSTLKTQIEGTERSINHLRHSELKYSRIALPKIFSETNNYQAFDIEY
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA