| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229692
Identifier: 17229692
GI number: 17229692
Start: 2640422
End: 2640982
Strand: Reverse
Name: 17229692
Synonym: all2200
Alternate gene names: NA
Gene position: 2640982-2640422 (Counterclockwise)
Preceding gene: 17229708
Following gene: 17229691
Centisome position: 41.18
GC content: 39.39
Gene sequence:
>561_bases ATGTCATACAAAAACGGAAATTACTGTGCTTTCTACGTTGCTGAACCATTTAATGAAAGTGCTTTAGGCGCATACGCAAC CAAGGACTTTGTTTACTACAATTTGCTGAGAACTTGGAAAGGAAGTGACTCATCCTTTCCCTTCAACGACTCTCATAGTA AAACTTACAGCGTTCGAGATGGCAGTGACTGGGAGTTAACCTTGAAGCCAAGGCTCCGAGAACGTCTTAGAAACTCAAAG AACGTGATCCTATTCCTCAGCGAAAGGACAGTAAATTCTCGCGCCCTAAAAGAGGAAATAGATTACGGAATAAATTCACT TGGACTTCCGGTAATTGTGATCTACCCCGACTACGATACCAAGGAAAGCCTCTTGCATAACGGCTCTTTAAAAGACGAGA TTAAGAATTTATGGAATAAGCTACCGATACTAAGGGAATCAATGAATAAAGTTCCAACTTTACATGTCCCGATGAATAAA TATCTTATTACTGAGTCGCTGAAAAATAATGACTTCATGACAAACACGAAAACAACACCAGATGTGTATCTTTATCGATA A
Upstream 100 bases:
>100_bases TATGGAAGGGGATTAGATGGAACATTGGGTATAATAAGTAGTTAGCCGAGCCTTAATTTAAGCATCATTGTTCATTGACA AAGGCAGTATTGAGGAAAGA
Downstream 100 bases:
>100_bases CAATGTCTTAACCGTTGGTATGACAGCCTTTGGTAAAAAACAAGAAAATTGAAGTTTAGGAGGAGGCTTTGGTCAAAGTT AATTTGCTTGATAATAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSYKNGNYCAFYVAEPFNESALGAYATKDFVYYNLLRTWKGSDSSFPFNDSHSKTYSVRDGSDWELTLKPRLRERLRNSK NVILFLSERTVNSRALKEEIDYGINSLGLPVIVIYPDYDTKESLLHNGSLKDEIKNLWNKLPILRESMNKVPTLHVPMNK YLITESLKNNDFMTNTKTTPDVYLYR
Sequences:
>Translated_186_residues MSYKNGNYCAFYVAEPFNESALGAYATKDFVYYNLLRTWKGSDSSFPFNDSHSKTYSVRDGSDWELTLKPRLRERLRNSK NVILFLSERTVNSRALKEEIDYGINSLGLPVIVIYPDYDTKESLLHNGSLKDEIKNLWNKLPILRESMNKVPTLHVPMNK YLITESLKNNDFMTNTKTTPDVYLYR >Mature_185_residues SYKNGNYCAFYVAEPFNESALGAYATKDFVYYNLLRTWKGSDSSFPFNDSHSKTYSVRDGSDWELTLKPRLRERLRNSKN VILFLSERTVNSRALKEEIDYGINSLGLPVIVIYPDYDTKESLLHNGSLKDEIKNLWNKLPILRESMNKVPTLHVPMNKY LITESLKNNDFMTNTKTTPDVYLYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21658; Mature: 21527
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYKNGNYCAFYVAEPFNESALGAYATKDFVYYNLLRTWKGSDSSFPFNDSHSKTYSVRD CCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC GSDWELTLKPRLRERLRNSKNVILFLSERTVNSRALKEEIDYGINSLGLPVIVIYPDYDT CCCCEEEECHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCC KESLLHNGSLKDEIKNLWNKLPILRESMNKVPTLHVPMNKYLITESLKNNDFMTNTKTTP HHHHHHCCCCHHHHHHHHHHCHHHHHHHHCCCEEEECCCCEEEECCCCCCCCEECCCCCC DVYLYR CEEEEC >Mature Secondary Structure SYKNGNYCAFYVAEPFNESALGAYATKDFVYYNLLRTWKGSDSSFPFNDSHSKTYSVRD CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC GSDWELTLKPRLRERLRNSKNVILFLSERTVNSRALKEEIDYGINSLGLPVIVIYPDYDT CCCCEEEECHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCC KESLLHNGSLKDEIKNLWNKLPILRESMNKVPTLHVPMNKYLITESLKNNDFMTNTKTTP HHHHHHCCCCHHHHHHHHHHCHHHHHHHHCCCEEEECCCCEEEECCCCCCCCEECCCCCC DVYLYR CEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA