| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229690
Identifier: 17229690
GI number: 17229690
Start: 2638538
End: 2639218
Strand: Reverse
Name: 17229690
Synonym: all2198
Alternate gene names: NA
Gene position: 2639218-2638538 (Counterclockwise)
Preceding gene: 17229691
Following gene: 17229689
Centisome position: 41.15
GC content: 39.65
Gene sequence:
>681_bases ATGAATTGGTATGAGAACCCTACGATTGCTGCAATTATTGGTGGAGTTGTTGGAGCAGCAATAACAGCAGCAGCGTCCAT ATTCATCTGGCAAAAAACAAGCCGAGTTAGACGAATTGATTGTGTCATCAATGACGCATCTTCGCTGTTAACATTTTCAG ATACGATTCGGAGTAAATTAGAAGTGAAATATGCAGGAGAACAAACAACATCTGTTTTTCTGTTCAATCTCGAAGTTTTC AATTCTGGAAACCAAGCAGTTGGAAATCAACCAGTTTTGGTACGACTTGATAATAATGCCAAGATCGTTGGCTACAGCAT AAAGACTGAACCTGAAGTCGGCTTTGGAAAAATTAGTGAGTTACAGCGTCAGAATAGCGAACTTGATTTGAGCATTGAGC TATTGAATCCAGGTGACCGTGTTTACCTTGAGCTAATTTCTGTAAATAATACATCCGATCTAATTGAGGTGTATATGAAA AATGCGAATGTTATCTGTCGCTCATATACTCGTAAAGCCGCCGAAAGTGCAATTTTAGGAGTTCTTAGCAAGTCTGTTGA TCCAACGCTTGTCTCGTTAGCTATGATGCGTTCAATTCCATTCTTTGGAGGATTTATGGAGCCATTTATGACTGTTGTCT TAGCAGAGCGATTTGAAAGGGCTTTGCGTCAAAGAAAGTAG
Upstream 100 bases:
>100_bases TAGTATAGAGTCATCGTCTTCGTTTCGGTCACATCTACTGCCGCTCACTTTAGCCGTTAGCTGGAAATTTATGTTCACGT GATGAGGAGTAATGCAATAG
Downstream 100 bases:
>100_bases CTTAAAACTACGGTAAAAAGCCAGTTAACCAATACGTGAATTGAGGTAGGTTGTCCATAAGGTTAAGATGTAAAAAGAAT AATTGTGCTTACTTCGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MNWYENPTIAAIIGGVVGAAITAAASIFIWQKTSRVRRIDCVINDASSLLTFSDTIRSKLEVKYAGEQTTSVFLFNLEVF NSGNQAVGNQPVLVRLDNNAKIVGYSIKTEPEVGFGKISELQRQNSELDLSIELLNPGDRVYLELISVNNTSDLIEVYMK NANVICRSYTRKAAESAILGVLSKSVDPTLVSLAMMRSIPFFGGFMEPFMTVVLAERFERALRQRK
Sequences:
>Translated_226_residues MNWYENPTIAAIIGGVVGAAITAAASIFIWQKTSRVRRIDCVINDASSLLTFSDTIRSKLEVKYAGEQTTSVFLFNLEVF NSGNQAVGNQPVLVRLDNNAKIVGYSIKTEPEVGFGKISELQRQNSELDLSIELLNPGDRVYLELISVNNTSDLIEVYMK NANVICRSYTRKAAESAILGVLSKSVDPTLVSLAMMRSIPFFGGFMEPFMTVVLAERFERALRQRK >Mature_226_residues MNWYENPTIAAIIGGVVGAAITAAASIFIWQKTSRVRRIDCVINDASSLLTFSDTIRSKLEVKYAGEQTTSVFLFNLEVF NSGNQAVGNQPVLVRLDNNAKIVGYSIKTEPEVGFGKISELQRQNSELDLSIELLNPGDRVYLELISVNNTSDLIEVYMK NANVICRSYTRKAAESAILGVLSKSVDPTLVSLAMMRSIPFFGGFMEPFMTVVLAERFERALRQRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25067; Mature: 25067
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWYENPTIAAIIGGVVGAAITAAASIFIWQKTSRVRRIDCVINDASSLLTFSDTIRSKL CCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEEEECCHHHEEHHHHHHHHE EVKYAGEQTTSVFLFNLEVFNSGNQAVGNQPVLVRLDNNAKIVGYSIKTEPEVGFGKISE EEEECCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHHH LQRQNSELDLSIELLNPGDRVYLELISVNNTSDLIEVYMKNANVICRSYTRKAAESAILG HHHCCCCCEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH VLSKSVDPTLVSLAMMRSIPFFGGFMEPFMTVVLAERFERALRQRK HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNWYENPTIAAIIGGVVGAAITAAASIFIWQKTSRVRRIDCVINDASSLLTFSDTIRSKL CCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEEEECCHHHEEHHHHHHHHE EVKYAGEQTTSVFLFNLEVFNSGNQAVGNQPVLVRLDNNAKIVGYSIKTEPEVGFGKISE EEEECCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCCHHHHH LQRQNSELDLSIELLNPGDRVYLELISVNNTSDLIEVYMKNANVICRSYTRKAAESAILG HHHCCCCCEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH VLSKSVDPTLVSLAMMRSIPFFGGFMEPFMTVVLAERFERALRQRK HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA