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The map label for this gene is yxjL [H]

Identifier: 17229630

GI number: 17229630

Start: 2567366

End: 2567995

Strand: Direct

Name: yxjL [H]

Synonym: alr2138

Alternate gene names: 17229630

Gene position: 2567366-2567995 (Clockwise)

Preceding gene: 17229629

Following gene: 17229631

Centisome position: 40.03

GC content: 46.35

Gene sequence:

>630_bases
ATGAGCCAAGCCATAACCATTCGGGTTCTGATTGCAGACGATCATGCTATTTTTCGGCAAGGATTAGCCACGATTATTAA
CCGTGACCCAGAGATGCAGGTGGTTGCCCAGGCTGAAAATGGGGAACAAGTGATCGCTCTCTTTGAGGAACATCAACCAG
ATGTCACGCTGATGGATCTGCGAATGCCGGAAGTGGAAGGCGTTGCCGCCATCAGTGCAATTTGTGCTACTGCTAAATCT
GCTCGGATTATTGTACTGACCACGTATGATAGTGACGAAGATATTTATCGGGGATTGCAGGCAGGCGCAAAAGGATATCT
GTTGAAAGAAACTGAACCTGACGAGCTTCTGAATGCTATTCGTACCGTTCATCGGGGTCATAAGTATATTCCGCCTGATG
TAGGAGCAAAGTTGGTACAGCGCCTCAGCAATCCAGAACTGAGTGAAAGAGAACTAGAAGTACTCCGCTCACTGGCGCAG
GGAATGAGCAATGCCGATATTGCAGATGCTTTGAGTATTGGTGAAGGCACTGTCAAATCTCATGTCAATCGGATTTTGAA
TAAATTGGATGTTAGCGATCGCACCCAAGCTGTAATTGTTGCCGTTAAACGCGGCATTGTTAATTTATAG

Upstream 100 bases:

>100_bases
AGCGAACGGGCAGAGCGCATCGGCGCACAACTCACGATTAGGAGTCAACCTGGACAAGGAACAGAGATTGTTGTTACCGT
CAATTGGGAGTAGCATCACG

Downstream 100 bases:

>100_bases
GATGTACTTTCGATAGAATTGGGATTCTAACTTGAGTTATAACTAGCCTTCTACTCCACGATGGCATGGTTGCTCTATCA
ATTTATACTGTAAAAATTTT

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSQAITIRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEVEGVAAISAICATAKS
ARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRGHKYIPPDVGAKLVQRLSNPELSERELEVLRSLAQ
GMSNADIADALSIGEGTVKSHVNRILNKLDVSDRTQAVIVAVKRGIVNL

Sequences:

>Translated_209_residues
MSQAITIRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEVEGVAAISAICATAKS
ARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRGHKYIPPDVGAKLVQRLSNPELSERELEVLRSLAQ
GMSNADIADALSIGEGTVKSHVNRILNKLDVSDRTQAVIVAVKRGIVNL
>Mature_208_residues
SQAITIRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDLRMPEVEGVAAISAICATAKSA
RIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAIRTVHRGHKYIPPDVGAKLVQRLSNPELSERELEVLRSLAQG
MSNADIADALSIGEGTVKSHVNRILNKLDVSDRTQAVIVAVKRGIVNL

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=211, Percent_Identity=38.8625592417062, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1790102, Length=187, Percent_Identity=35.8288770053476, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1788222, Length=210, Percent_Identity=31.4285714285714, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1787473, Length=208, Percent_Identity=35.5769230769231, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1786747, Length=189, Percent_Identity=25.9259259259259, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788712, Length=193, Percent_Identity=23.8341968911917, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788546, Length=196, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788550, Length=110, Percent_Identity=34.5454545454545, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22872; Mature: 22740

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQAITIRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDL
CCCEEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEE
RMPEVEGVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAI
CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCEEECCCCHHHHHHHH
RTVHRGHKYIPPDVGAKLVQRLSNPELSERELEVLRSLAQGMSNADIADALSIGEGTVKS
HHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHH
HVNRILNKLDVSDRTQAVIVAVKRGIVNL
HHHHHHHHCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQAITIRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDL
CCEEEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEE
RMPEVEGVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAI
CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCEEECCCCHHHHHHHH
RTVHRGHKYIPPDVGAKLVQRLSNPELSERELEVLRSLAQGMSNADIADALSIGEGTVKS
HHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHH
HVNRILNKLDVSDRTQAVIVAVKRGIVNL
HHHHHHHHCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]