| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229595
Identifier: 17229595
GI number: 17229595
Start: 2521463
End: 2522056
Strand: Reverse
Name: 17229595
Synonym: all2103
Alternate gene names: NA
Gene position: 2522056-2521463 (Counterclockwise)
Preceding gene: 17229597
Following gene: 17229594
Centisome position: 39.32
GC content: 43.94
Gene sequence:
>594_bases ATGGAAACTCTCACCCTCAACGTACCACCAGCCGTAGGTTTAACGGATGAGCAGTTTTATCAACTGTGCATAGCCAATGA CGAATGGCGAATTGAATTGACGGCAGAAGGAGAATTAATCATTATGCCCCCAACAGGCGGCGAAAGCGGCATTAGAAACG CTAATTTAACAACAGATTTAAACTTATGGAATCGACAAGCCAAACTCGGTAAAGTATTTGATTCATCAACAGAATTTCGC TTACCAAATGGTGCTTTTCGTTCCCCTGATGCGGCTTGGGTGAAACTAGAACGCTGGGAAGCATTGACAAGTGAACAAAG GCGACGCTTTCCGCCACTATGTCCCGATTTTGTGATTGAACTGCGATCGGAAACTGACTCTTTAAAGAAATTGCGTGCCA AAATGCAGGAGTATCGGGATAATGGCGCTCGTTTGGGTTTTCTCATTGACCCAAAAACACCCTTAGTAGAAATTTATCGC TCTGATGCTGAGGTAGAAACGATCAATTTTTCGGCTGACCAACCGCCCCAACTTTCCGGCGAAGATATATTACCTGGGTT TATCTTAGATTTGGCTTTCATCCTCAATCCATAA
Upstream 100 bases:
>100_bases AGAAGGGAAACAATTAAGTTAGCTGCCTCAATGATCCATAAACCGTGACCCACCGTAGGCGATCGCTCATAATAAAATAA ACCCGATTGGCAAATTACCT
Downstream 100 bases:
>100_bases AATCACTCAAACAAAAAACCCGTCTGGTGGTCGCAAGAAGCAGGGGGGCAGGGAGCAGGGAGCAAGGGAGAGAGATAAGA AGCAGGGGGCAGGGGGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues METLTLNVPPAVGLTDEQFYQLCIANDEWRIELTAEGELIIMPPTGGESGIRNANLTTDLNLWNRQAKLGKVFDSSTEFR LPNGAFRSPDAAWVKLERWEALTSEQRRRFPPLCPDFVIELRSETDSLKKLRAKMQEYRDNGARLGFLIDPKTPLVEIYR SDAEVETINFSADQPPQLSGEDILPGFILDLAFILNP
Sequences:
>Translated_197_residues METLTLNVPPAVGLTDEQFYQLCIANDEWRIELTAEGELIIMPPTGGESGIRNANLTTDLNLWNRQAKLGKVFDSSTEFR LPNGAFRSPDAAWVKLERWEALTSEQRRRFPPLCPDFVIELRSETDSLKKLRAKMQEYRDNGARLGFLIDPKTPLVEIYR SDAEVETINFSADQPPQLSGEDILPGFILDLAFILNP >Mature_197_residues METLTLNVPPAVGLTDEQFYQLCIANDEWRIELTAEGELIIMPPTGGESGIRNANLTTDLNLWNRQAKLGKVFDSSTEFR LPNGAFRSPDAAWVKLERWEALTSEQRRRFPPLCPDFVIELRSETDSLKKLRAKMQEYRDNGARLGFLIDPKTPLVEIYR SDAEVETINFSADQPPQLSGEDILPGFILDLAFILNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22311; Mature: 22311
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METLTLNVPPAVGLTDEQFYQLCIANDEWRIELTAEGELIIMPPTGGESGIRNANLTTDL CCEEEEECCCCCCCCHHHHEEEEECCCCEEEEEEECCCEEEECCCCCCCCCCCCCCEEEC NLWNRQAKLGKVFDSSTEFRLPNGAFRSPDAAWVKLERWEALTSEQRRRFPPLCPDFVIE HHHCCHHHHHHHHCCCCCEECCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHH LRSETDSLKKLRAKMQEYRDNGARLGFLIDPKTPLVEIYRSDAEVETINFSADQPPQLSG HHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHEECCCCCEEEEEECCCCCCCCCC EDILPGFILDLAFILNP CCCCHHHHHHHHHHCCC >Mature Secondary Structure METLTLNVPPAVGLTDEQFYQLCIANDEWRIELTAEGELIIMPPTGGESGIRNANLTTDL CCEEEEECCCCCCCCHHHHEEEEECCCCEEEEEEECCCEEEECCCCCCCCCCCCCCEEEC NLWNRQAKLGKVFDSSTEFRLPNGAFRSPDAAWVKLERWEALTSEQRRRFPPLCPDFVIE HHHCCHHHHHHHHCCCCCEECCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHH LRSETDSLKKLRAKMQEYRDNGARLGFLIDPKTPLVEIYRSDAEVETINFSADQPPQLSG HHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHEECCCCCEEEEEECCCCCCCCCC EDILPGFILDLAFILNP CCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA