Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17229595

Identifier: 17229595

GI number: 17229595

Start: 2521463

End: 2522056

Strand: Reverse

Name: 17229595

Synonym: all2103

Alternate gene names: NA

Gene position: 2522056-2521463 (Counterclockwise)

Preceding gene: 17229597

Following gene: 17229594

Centisome position: 39.32

GC content: 43.94

Gene sequence:

>594_bases
ATGGAAACTCTCACCCTCAACGTACCACCAGCCGTAGGTTTAACGGATGAGCAGTTTTATCAACTGTGCATAGCCAATGA
CGAATGGCGAATTGAATTGACGGCAGAAGGAGAATTAATCATTATGCCCCCAACAGGCGGCGAAAGCGGCATTAGAAACG
CTAATTTAACAACAGATTTAAACTTATGGAATCGACAAGCCAAACTCGGTAAAGTATTTGATTCATCAACAGAATTTCGC
TTACCAAATGGTGCTTTTCGTTCCCCTGATGCGGCTTGGGTGAAACTAGAACGCTGGGAAGCATTGACAAGTGAACAAAG
GCGACGCTTTCCGCCACTATGTCCCGATTTTGTGATTGAACTGCGATCGGAAACTGACTCTTTAAAGAAATTGCGTGCCA
AAATGCAGGAGTATCGGGATAATGGCGCTCGTTTGGGTTTTCTCATTGACCCAAAAACACCCTTAGTAGAAATTTATCGC
TCTGATGCTGAGGTAGAAACGATCAATTTTTCGGCTGACCAACCGCCCCAACTTTCCGGCGAAGATATATTACCTGGGTT
TATCTTAGATTTGGCTTTCATCCTCAATCCATAA

Upstream 100 bases:

>100_bases
AGAAGGGAAACAATTAAGTTAGCTGCCTCAATGATCCATAAACCGTGACCCACCGTAGGCGATCGCTCATAATAAAATAA
ACCCGATTGGCAAATTACCT

Downstream 100 bases:

>100_bases
AATCACTCAAACAAAAAACCCGTCTGGTGGTCGCAAGAAGCAGGGGGGCAGGGAGCAGGGAGCAAGGGAGAGAGATAAGA
AGCAGGGGGCAGGGGGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
METLTLNVPPAVGLTDEQFYQLCIANDEWRIELTAEGELIIMPPTGGESGIRNANLTTDLNLWNRQAKLGKVFDSSTEFR
LPNGAFRSPDAAWVKLERWEALTSEQRRRFPPLCPDFVIELRSETDSLKKLRAKMQEYRDNGARLGFLIDPKTPLVEIYR
SDAEVETINFSADQPPQLSGEDILPGFILDLAFILNP

Sequences:

>Translated_197_residues
METLTLNVPPAVGLTDEQFYQLCIANDEWRIELTAEGELIIMPPTGGESGIRNANLTTDLNLWNRQAKLGKVFDSSTEFR
LPNGAFRSPDAAWVKLERWEALTSEQRRRFPPLCPDFVIELRSETDSLKKLRAKMQEYRDNGARLGFLIDPKTPLVEIYR
SDAEVETINFSADQPPQLSGEDILPGFILDLAFILNP
>Mature_197_residues
METLTLNVPPAVGLTDEQFYQLCIANDEWRIELTAEGELIIMPPTGGESGIRNANLTTDLNLWNRQAKLGKVFDSSTEFR
LPNGAFRSPDAAWVKLERWEALTSEQRRRFPPLCPDFVIELRSETDSLKKLRAKMQEYRDNGARLGFLIDPKTPLVEIYR
SDAEVETINFSADQPPQLSGEDILPGFILDLAFILNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22311; Mature: 22311

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLTLNVPPAVGLTDEQFYQLCIANDEWRIELTAEGELIIMPPTGGESGIRNANLTTDL
CCEEEEECCCCCCCCHHHHEEEEECCCCEEEEEEECCCEEEECCCCCCCCCCCCCCEEEC
NLWNRQAKLGKVFDSSTEFRLPNGAFRSPDAAWVKLERWEALTSEQRRRFPPLCPDFVIE
HHHCCHHHHHHHHCCCCCEECCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHH
LRSETDSLKKLRAKMQEYRDNGARLGFLIDPKTPLVEIYRSDAEVETINFSADQPPQLSG
HHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHEECCCCCEEEEEECCCCCCCCCC
EDILPGFILDLAFILNP
CCCCHHHHHHHHHHCCC
>Mature Secondary Structure
METLTLNVPPAVGLTDEQFYQLCIANDEWRIELTAEGELIIMPPTGGESGIRNANLTTDL
CCEEEEECCCCCCCCHHHHEEEEECCCCEEEEEEECCCEEEECCCCCCCCCCCCCCEEEC
NLWNRQAKLGKVFDSSTEFRLPNGAFRSPDAAWVKLERWEALTSEQRRRFPPLCPDFVIE
HHHCCHHHHHHHHCCCCCEECCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHH
LRSETDSLKKLRAKMQEYRDNGARLGFLIDPKTPLVEIYRSDAEVETINFSADQPPQLSG
HHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHEECCCCCEEEEEECCCCCCCCCC
EDILPGFILDLAFILNP
CCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA