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The map label for this gene is vanA [H]

Identifier: 17229589

GI number: 17229589

Start: 2516278

End: 2517777

Strand: Reverse

Name: vanA [H]

Synonym: all2097

Alternate gene names: 17229589

Gene position: 2517777-2516278 (Counterclockwise)

Preceding gene: 17229590

Following gene: 17229588

Centisome position: 39.26

GC content: 43.73

Gene sequence:

>1500_bases
ATGACCACTGAAACCAAGCTGCAAGGGAATTCCCAGAACGAAAATTTATTAGACAACGCAACTGAAGAACAATCATCAAA
AGAAGAAAATATCTTCCAATGGACAAAGCAGTGGTATCCAGTAGCGGTGGTAGAGTTCCTTGATCCTAGCCGTCCTCATG
CTATGCAATTATTAGGTAAAGATATTGTTCTGTGGCGGGATGGTTCTAGTCAATGGCGCTGCTTTGAAGATTTTTGTCCC
CATAGACTTGCACCACTTTCAGAAGGTCGAGTCGAAGCAGATGGTACGCTTTTATGTGCTTACCATGCTTGGCGTTTTGA
TGCTGAAGGTAACTGTGTGAGTATACCCCAGTCAAAAGACGAACAGACGGCGGCAAAGAACTGCGAAAGTCAAAAATCCT
GTGCAGTAGTTTATCCGACGCAGGAACGCCAGGGGCTACTGTGGGTATGGGCGGAAGCAGGAGAACAAGCCAAGGTAGAA
AGCCAATTGCAGACACCGCGAATTGTTCCAGAACTAGAAGATAACTCAGGTAAAGTCATAAAATCACCTTGGAATTTCCG
CGACTTACCCTATGGGTGGGACTATTTCATGGAAAATGTCTCAGATCCTGCTCATGTACCTGTTTCCCACCACGGCATCA
TAGGCGATCGCTACCAGGATGCCAAATTCTACGATATGATTCCTATACGCCACATATCTACCCAAGATGGGTTTGCCTTT
GAAATTCAGCCAACACAAGGCAATACAGTACAAGCAATTCACGATTTTCAACCACCTTGTTACATGAGAATAGCTTCTAC
CTCTGAGGATGGTGGACAGTTAATTTTGGCTTTGTATGCTACGCCAACTCGTCCTGGTTGGTGTCGCCACATTGGTTGTC
AAGTTTTCGTCAAAAATCCCCAAGGAAAGAAACCCCAAGGATTATCTTTCTTTGGACTACCACTACCCGTTTGGTTGGTT
CATGTATTAGCATCCTTATTTCTGCACCAAGATATGGTATTTCTGCATTACCAAGAAAAAATTATTGCCCAGAGAAGAAA
CGGTAAATGGCTGAACGCTGTATATACACCCAATCCTCAAGACAAGATGGTGATTACATTGCGTCAGTGGTGGGAAAACC
GAGCTGGTGGTGGTATACCTTGGGCGGAAGGATATAGCAGCGATATACCTCCAGCTGAAAAAGACAAGCAAAAGCTATTT
GATGTCTGGACAACCCACACTCAACATTGTACAGTTTGCCAAGATGCGCTAAAAAACATCAATCGTCTGACTGTACTAGC
TTATATATCTGCGGCTGTCTGCTTGTTTCTAGCTGTGATTTTAGATGCCAGATCTGTGGCAATGCAAGCGGCTTTAGGTG
CATCTATATTCACAGTACCTCCGGTAGAATTTTGGTTAGCACTTGGGGGCGGTATTTTGTTGGCAGTAGTTGGATATCAA
CTCAAAAGATTTAGTCGGCTATTTTATGTATACGAATTTGAACACTCTCGTAATGATTAA

Upstream 100 bases:

>100_bases
CTTTAATTAACTTTGTCGCTGACATCATCCAGCAGATGATTTAAAATCACGCGCTTTTTTGCGCTTAAATTTCCACGTCA
CAATAGGTAAAAACTCTACC

Downstream 100 bases:

>100_bases
GAACAATTACTGAGTCTGTGTCAGAGTCTCATAATTTTTCTAATTACCAACTAACAATTACCTTCAATCCTCACAAGTTC
CTCAAATTTCCTGTTTATAA

Product: cell death suppressor protein

Products: NA

Alternate protein names: 4-hydroxy-3-methoxybenzoate demethylase [H]

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MTTETKLQGNSQNENLLDNATEEQSSKEENIFQWTKQWYPVAVVEFLDPSRPHAMQLLGKDIVLWRDGSSQWRCFEDFCP
HRLAPLSEGRVEADGTLLCAYHAWRFDAEGNCVSIPQSKDEQTAAKNCESQKSCAVVYPTQERQGLLWVWAEAGEQAKVE
SQLQTPRIVPELEDNSGKVIKSPWNFRDLPYGWDYFMENVSDPAHVPVSHHGIIGDRYQDAKFYDMIPIRHISTQDGFAF
EIQPTQGNTVQAIHDFQPPCYMRIASTSEDGGQLILALYATPTRPGWCRHIGCQVFVKNPQGKKPQGLSFFGLPLPVWLV
HVLASLFLHQDMVFLHYQEKIIAQRRNGKWLNAVYTPNPQDKMVITLRQWWENRAGGGIPWAEGYSSDIPPAEKDKQKLF
DVWTTHTQHCTVCQDALKNINRLTVLAYISAAVCLFLAVILDARSVAMQAALGASIFTVPPVEFWLALGGGILLAVVGYQ
LKRFSRLFYVYEFEHSRND

Sequences:

>Translated_499_residues
MTTETKLQGNSQNENLLDNATEEQSSKEENIFQWTKQWYPVAVVEFLDPSRPHAMQLLGKDIVLWRDGSSQWRCFEDFCP
HRLAPLSEGRVEADGTLLCAYHAWRFDAEGNCVSIPQSKDEQTAAKNCESQKSCAVVYPTQERQGLLWVWAEAGEQAKVE
SQLQTPRIVPELEDNSGKVIKSPWNFRDLPYGWDYFMENVSDPAHVPVSHHGIIGDRYQDAKFYDMIPIRHISTQDGFAF
EIQPTQGNTVQAIHDFQPPCYMRIASTSEDGGQLILALYATPTRPGWCRHIGCQVFVKNPQGKKPQGLSFFGLPLPVWLV
HVLASLFLHQDMVFLHYQEKIIAQRRNGKWLNAVYTPNPQDKMVITLRQWWENRAGGGIPWAEGYSSDIPPAEKDKQKLF
DVWTTHTQHCTVCQDALKNINRLTVLAYISAAVCLFLAVILDARSVAMQAALGASIFTVPPVEFWLALGGGILLAVVGYQ
LKRFSRLFYVYEFEHSRND
>Mature_498_residues
TTETKLQGNSQNENLLDNATEEQSSKEENIFQWTKQWYPVAVVEFLDPSRPHAMQLLGKDIVLWRDGSSQWRCFEDFCPH
RLAPLSEGRVEADGTLLCAYHAWRFDAEGNCVSIPQSKDEQTAAKNCESQKSCAVVYPTQERQGLLWVWAEAGEQAKVES
QLQTPRIVPELEDNSGKVIKSPWNFRDLPYGWDYFMENVSDPAHVPVSHHGIIGDRYQDAKFYDMIPIRHISTQDGFAFE
IQPTQGNTVQAIHDFQPPCYMRIASTSEDGGQLILALYATPTRPGWCRHIGCQVFVKNPQGKKPQGLSFFGLPLPVWLVH
VLASLFLHQDMVFLHYQEKIIAQRRNGKWLNAVYTPNPQDKMVITLRQWWENRAGGGIPWAEGYSSDIPPAEKDKQKLFD
VWTTHTQHCTVCQDALKNINRLTVLAYISAAVCLFLAVILDARSVAMQAALGASIFTVPPVEFWLALGGGILLAVVGYQL
KRFSRLFYVYEFEHSRND

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: =1.14.13.82 [H]

Molecular weight: Translated: 56708; Mature: 56577

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTETKLQGNSQNENLLDNATEEQSSKEENIFQWTKQWYPVAVVEFLDPSRPHAMQLLGK
CCCCCCCCCCCCCCCHHCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCC
DIVLWRDGSSQWRCFEDFCPHRLAPLSEGRVEADGTLLCAYHAWRFDAEGNCVSIPQSKD
EEEEEECCCCCCEEHHHCCCCCCCCCCCCEECCCCCEEEEEEEEEECCCCCEEECCCCCC
EQTAAKNCESQKSCAVVYPTQERQGLLWVWAEAGEQAKVESQLQTPRIVPELEDNSGKVI
HHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCEECCCCCEE
KSPWNFRDLPYGWDYFMENVSDPAHVPVSHHGIIGDRYQDAKFYDMIPIRHISTQDGFAF
ECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCEEE
EIQPTQGNTVQAIHDFQPPCYMRIASTSEDGGQLILALYATPTRPGWCRHIGCQVFVKNP
EEECCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCCHHEECCCEEEEECC
QGKKPQGLSFFGLPLPVWLVHVLASLFLHQDMVFLHYQEKIIAQRRNGKWLNAVYTPNPQ
CCCCCCCCEEECCCHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHCCCCEEEEEECCCCC
DKMVITLRQWWENRAGGGIPWAEGYSSDIPPAEKDKQKLFDVWTTHTQHCTVCQDALKNI
CCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
NRLTVLAYISAAVCLFLAVILDARSVAMQAALGASIFTVPPVEFWLALGGGILLAVVGYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCHHHHHHHHHH
LKRFSRLFYVYEFEHSRND
HHHHHHEEEEEEECCCCCC
>Mature Secondary Structure 
TTETKLQGNSQNENLLDNATEEQSSKEENIFQWTKQWYPVAVVEFLDPSRPHAMQLLGK
CCCCCCCCCCCCCCHHCCCHHHHCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCC
DIVLWRDGSSQWRCFEDFCPHRLAPLSEGRVEADGTLLCAYHAWRFDAEGNCVSIPQSKD
EEEEEECCCCCCEEHHHCCCCCCCCCCCCEECCCCCEEEEEEEEEECCCCCEEECCCCCC
EQTAAKNCESQKSCAVVYPTQERQGLLWVWAEAGEQAKVESQLQTPRIVPELEDNSGKVI
HHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCEECCCCCEE
KSPWNFRDLPYGWDYFMENVSDPAHVPVSHHGIIGDRYQDAKFYDMIPIRHISTQDGFAF
ECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCEEE
EIQPTQGNTVQAIHDFQPPCYMRIASTSEDGGQLILALYATPTRPGWCRHIGCQVFVKNP
EEECCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEEECCCCCCHHEECCCEEEEECC
QGKKPQGLSFFGLPLPVWLVHVLASLFLHQDMVFLHYQEKIIAQRRNGKWLNAVYTPNPQ
CCCCCCCCEEECCCHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHCCCCEEEEEECCCCC
DKMVITLRQWWENRAGGGIPWAEGYSSDIPPAEKDKQKLFDVWTTHTQHCTVCQDALKNI
CCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
NRLTVLAYISAAVCLFLAVILDARSVAMQAALGASIFTVPPVEFWLALGGGILLAVVGYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCHHHHHHHHHH
LKRFSRLFYVYEFEHSRND
HHHHHHEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3170489 [H]