| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17229578
Identifier: 17229578
GI number: 17229578
Start: 2493110
End: 2494804
Strand: Reverse
Name: 17229578
Synonym: all2086
Alternate gene names: NA
Gene position: 2494804-2493110 (Counterclockwise)
Preceding gene: 17229580
Following gene: 17229577
Centisome position: 38.9
GC content: 41.83
Gene sequence:
>1695_bases ATGCCAGAAACTAAATCAAAACTTTTAATTCCTGTTGTTGGCGCGGCTGTAGTCGTAGCGGGAAGTATAGCTGCCTATAT GTATCTTAAAGGGCCTTCAGGGGATGGATCTGGTGCTTTAGGTAGCGCTAAACTAGTACCTTCGACAGCATTAATGGCTA CTTACATTACTACTGATCCACAAGCTTGGGAAAAGTTACAACAATTTGGCACACCTGAAGCACAAAAGTTAGTCGCTAAG GGGTTGGAAGACTTTAATAAAGAAATGTCGAAAGATGGCAACATTTCTTACGAAAAAGATATCAAACCTTGGGTTGGTGG GGTAATGGTGGCTGTTTTACCTCCAAACGCAGCGAAACCTGCCCAATTTAATGCACCTGCGCCTGGAGCAAATCCACAGA TCGCTTTACGGCAAGAACCACAAGTTTTAATGGTAGTTGGGATTAAAGATAAACTGAGCGCGTTAAATTTTGCTAATAAA TTAAAAGCACAAAAGGGTGTTAAATCCCAGGAAACTGACTATAAAGGTGAAAAAATTACACAAACTCAGGCTGAAACTGG AGAGCCAACATACAGTGCTGTTTTGAATAATAGTTACTTAGTTTTTTCTCCAGAAAAACCAATTGTAGAAAAAGCTATAG ATACCTATAAAGGTCAACCATCCTTTGCGGCTAAAGAAGGAGCTAATAGTATTCTCAGCAAGGGTGTGGATGTAAAAAAT TCCCTGGCTCAAGTCTACATTCCTGATTATCCAGGGATGGTGAGACAACTGATAGCCGCAAGCCCCCAAGGAAATCAAGT AAATCCCCAAACCTTGAAACAACTGGATCAAGTAAAATCGATGGCTGCGGGTGTGGGAGTGGATGATGCAGGGTTACGAT TAAAAGCGATCGCTAATTTAGATCCCCAACTGAATAAATTCCAATATGAAAACTCTGAATCGAAAATATTAGGTCAATTT CCGGCTGAGACTTTTGCCCTCATTAGCGGACAAGGAATTAGTAAAGGGTGGTCAACAGTTGTCGAACAGTCGAAAGATTA TCCAGAATTTAAGCAAGCGCTCGAACAAGTACGCGCACAGACCAAACTAGTTAATCTCGACTTGGATAAAGACATTTTTG GCTGGATGGATCAAGAATTTGCTTTTGGTGCAATTCCCTCGAACCAAGGTGTATTAGCTAGTATTGGTTTTGGTGGAGCT TGGGTATTTGATACCAGCGATCGCAAAACCGCAGAAGCCACTTTGACAAAGTTGGATAATCTCGCTAAAACCCAACAAAT TAATATTACTACCAGAAATATTGGTGGTAAAGACGTTACCGAATGGCAAATTCCCCAACAAGGAGCTTTATTTGCCCACG GTTGGTTAGACCAAGATACCGTATTTTTAGCAGTTGGCGGCCCTGTTGCGGAAGCTTTGGCAAATGCCAAGAATCAAACC CTAGACAACAGCGACAGTTTTAAAGCCATTGCAGGTTCTTTACAAAAACCAAATGGGGGCTACTTTTATTTAGATATGGA CAGAACGATGACCTTATTCAATCGTTTTGCAACGCAAACACAGCGACCTATCCCCCCAGAAGCTAACGCTGTTCTCAGTT CCATTCGGGGCTTGGGTATCACTGCTAATAGCCCCGATAAATCCTTGAGTCAAGTGGAGATTTTGTTAGCCCTCAAACCT AATACAGCAAAGTAG
Upstream 100 bases:
>100_bases ATTTTTACACATAAATTCTAAAAGAGGCTGAGGAATTGGGAACAATTCCGGAAGGTCTACAGTACCCTTAGTGACAATTT AAGCAAAAGAGGATTAAACA
Downstream 100 bases:
>100_bases CCATTTAAACTCCCCGATTTCTCCAAGAAGTCGGGGATCTGACAGTGATGTCAACTTTTAAGTTTTACCTTGGTTTAGTA GATTTGCATCCCGCAAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 564; Mature: 563
Protein sequence:
>564_residues MPETKSKLLIPVVGAAVVVAGSIAAYMYLKGPSGDGSGALGSAKLVPSTALMATYITTDPQAWEKLQQFGTPEAQKLVAK GLEDFNKEMSKDGNISYEKDIKPWVGGVMVAVLPPNAAKPAQFNAPAPGANPQIALRQEPQVLMVVGIKDKLSALNFANK LKAQKGVKSQETDYKGEKITQTQAETGEPTYSAVLNNSYLVFSPEKPIVEKAIDTYKGQPSFAAKEGANSILSKGVDVKN SLAQVYIPDYPGMVRQLIAASPQGNQVNPQTLKQLDQVKSMAAGVGVDDAGLRLKAIANLDPQLNKFQYENSESKILGQF PAETFALISGQGISKGWSTVVEQSKDYPEFKQALEQVRAQTKLVNLDLDKDIFGWMDQEFAFGAIPSNQGVLASIGFGGA WVFDTSDRKTAEATLTKLDNLAKTQQINITTRNIGGKDVTEWQIPQQGALFAHGWLDQDTVFLAVGGPVAEALANAKNQT LDNSDSFKAIAGSLQKPNGGYFYLDMDRTMTLFNRFATQTQRPIPPEANAVLSSIRGLGITANSPDKSLSQVEILLALKP NTAK
Sequences:
>Translated_564_residues MPETKSKLLIPVVGAAVVVAGSIAAYMYLKGPSGDGSGALGSAKLVPSTALMATYITTDPQAWEKLQQFGTPEAQKLVAK GLEDFNKEMSKDGNISYEKDIKPWVGGVMVAVLPPNAAKPAQFNAPAPGANPQIALRQEPQVLMVVGIKDKLSALNFANK LKAQKGVKSQETDYKGEKITQTQAETGEPTYSAVLNNSYLVFSPEKPIVEKAIDTYKGQPSFAAKEGANSILSKGVDVKN SLAQVYIPDYPGMVRQLIAASPQGNQVNPQTLKQLDQVKSMAAGVGVDDAGLRLKAIANLDPQLNKFQYENSESKILGQF PAETFALISGQGISKGWSTVVEQSKDYPEFKQALEQVRAQTKLVNLDLDKDIFGWMDQEFAFGAIPSNQGVLASIGFGGA WVFDTSDRKTAEATLTKLDNLAKTQQINITTRNIGGKDVTEWQIPQQGALFAHGWLDQDTVFLAVGGPVAEALANAKNQT LDNSDSFKAIAGSLQKPNGGYFYLDMDRTMTLFNRFATQTQRPIPPEANAVLSSIRGLGITANSPDKSLSQVEILLALKP NTAK >Mature_563_residues PETKSKLLIPVVGAAVVVAGSIAAYMYLKGPSGDGSGALGSAKLVPSTALMATYITTDPQAWEKLQQFGTPEAQKLVAKG LEDFNKEMSKDGNISYEKDIKPWVGGVMVAVLPPNAAKPAQFNAPAPGANPQIALRQEPQVLMVVGIKDKLSALNFANKL KAQKGVKSQETDYKGEKITQTQAETGEPTYSAVLNNSYLVFSPEKPIVEKAIDTYKGQPSFAAKEGANSILSKGVDVKNS LAQVYIPDYPGMVRQLIAASPQGNQVNPQTLKQLDQVKSMAAGVGVDDAGLRLKAIANLDPQLNKFQYENSESKILGQFP AETFALISGQGISKGWSTVVEQSKDYPEFKQALEQVRAQTKLVNLDLDKDIFGWMDQEFAFGAIPSNQGVLASIGFGGAW VFDTSDRKTAEATLTKLDNLAKTQQINITTRNIGGKDVTEWQIPQQGALFAHGWLDQDTVFLAVGGPVAEALANAKNQTL DNSDSFKAIAGSLQKPNGGYFYLDMDRTMTLFNRFATQTQRPIPPEANAVLSSIRGLGITANSPDKSLSQVEILLALKPN TAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60588; Mature: 60457
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPETKSKLLIPVVGAAVVVAGSIAAYMYLKGPSGDGSGALGSAKLVPSTALMATYITTDP CCCCCCCEEEHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCH QAWEKLQQFGTPEAQKLVAKGLEDFNKEMSKDGNISYEKDIKPWVGGVMVAVLPPNAAKP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC AQFNAPAPGANPQIALRQEPQVLMVVGIKDKLSALNFANKLKAQKGVKSQETDYKGEKIT CCCCCCCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE QTQAETGEPTYSAVLNNSYLVFSPEKPIVEKAIDTYKGQPSFAAKEGANSILSKGVDVKN CCCCCCCCCHHHHEECCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC SLAQVYIPDYPGMVRQLIAASPQGNQVNPQTLKQLDQVKSMAAGVGVDDAGLRLKAIANL CCEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC DPQLNKFQYENSESKILGQFPAETFALISGQGISKGWSTVVEQSKDYPEFKQALEQVRAQ CCCHHHEEECCCCCCEEECCCCHHEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH TKLVNLDLDKDIFGWMDQEFAFGAIPSNQGVLASIGFGGAWVFDTSDRKTAEATLTKLDN HEEEEECCCCHHHHCCCCCCEEECCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHH LAKTQQINITTRNIGGKDVTEWQIPQQGALFAHGWLDQDTVFLAVGGPVAEALANAKNQT HHCCEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCHHHHHHHCCCCCC LDNSDSFKAIAGSLQKPNGGYFYLDMDRTMTLFNRFATQTQRPIPPEANAVLSSIRGLGI CCCCCCHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCE TANSPDKSLSQVEILLALKPNTAK ECCCCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure PETKSKLLIPVVGAAVVVAGSIAAYMYLKGPSGDGSGALGSAKLVPSTALMATYITTDP CCCCCCEEEHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCH QAWEKLQQFGTPEAQKLVAKGLEDFNKEMSKDGNISYEKDIKPWVGGVMVAVLPPNAAKP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC AQFNAPAPGANPQIALRQEPQVLMVVGIKDKLSALNFANKLKAQKGVKSQETDYKGEKIT CCCCCCCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE QTQAETGEPTYSAVLNNSYLVFSPEKPIVEKAIDTYKGQPSFAAKEGANSILSKGVDVKN CCCCCCCCCHHHHEECCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC SLAQVYIPDYPGMVRQLIAASPQGNQVNPQTLKQLDQVKSMAAGVGVDDAGLRLKAIANL CCEEEEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC DPQLNKFQYENSESKILGQFPAETFALISGQGISKGWSTVVEQSKDYPEFKQALEQVRAQ CCCHHHEEECCCCCCEEECCCCHHEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH TKLVNLDLDKDIFGWMDQEFAFGAIPSNQGVLASIGFGGAWVFDTSDRKTAEATLTKLDN HEEEEECCCCHHHHCCCCCCEEECCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHH LAKTQQINITTRNIGGKDVTEWQIPQQGALFAHGWLDQDTVFLAVGGPVAEALANAKNQT HHCCEEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCHHHHHHHCCCCCC LDNSDSFKAIAGSLQKPNGGYFYLDMDRTMTLFNRFATQTQRPIPPEANAVLSSIRGLGI CCCCCCHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCE TANSPDKSLSQVEILLALKPNTAK ECCCCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA