Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17229534

Identifier: 17229534

GI number: 17229534

Start: 2442745

End: 2444571

Strand: Direct

Name: 17229534

Synonym: alr2042

Alternate gene names: NA

Gene position: 2442745-2444571 (Clockwise)

Preceding gene: 17229533

Following gene: 17229535

Centisome position: 38.09

GC content: 37.77

Gene sequence:

>1827_bases
ATGAATTTTAATTACTTGAGATATTTTTTGAAATTTACTTCAATACCCAGTATTTGTCTCTTGTTGATATTATCAATTTC
TCATTTTTCTAGGGTATTGGCTCAAAATCCCAAAGGTGGAATTGACTGGATTGTAGTAGTAGATACTTCTGCTTCCATGC
GCGGTGTTGGCGGGACAAGAAATATCTTTACTCAAGTCAAAAATTCTATTAATGAATTTGTTAATACTGCCAGAGTAGGG
GATACAGTTACTATTTATAATTTCGATAGTGATGTAACTTTGCAAGCTCAAGAAATTCCTATTGCCAGCAATCCAGACCG
GGGTAAACTCAAACAAATAATTAATAACCTCAAAGCTGATGGTGTGCGTACTCACACAGGGAAAGCAGTACAACAAGCGC
TCTCTACTTCTGCAAAATTGAATCAACGTCCTAATACTGCGGATAGGACTGTGAGTATAGTTTTCCTAACAGATGGATTG
GAAGATGTCCAAGGTATTCCTAATCCTGTGCCGATTCCTCAAAGTACGCAACTTTTACGGGAACAAGAATGTAAACCTTA
TGTATTTTTCGTATCTTTAGGATTGAAAGAACACGAAAAACAATTAAATGAATTTGCCAGTAATCCCGCACTTTGTGGCA
AAGGGCGCGTTTTGCGTGACCCTGGAGGAGTGCAATTAAACAAGTTGGCTCAAAATATTAGGCCAAGACTCATTAAACCC
CAGATTGATGTTAGTTTATCTACTGTTGATTTGCCGCCTGTATTGCCAGGTACAACTACAAAAGCACTAAATATTAATAG
CATCAGTAATGTCAATGCTAAAGTGAGGTTGCAACTAAAAGACATAGAAAAAAGTGGTATTCGCCTAGTTTTGCCTAGCA
CAATTGACTTAGCAGCTAATCAACAAAAAGTTATTCCTATAAGTTTACAAATTCCAGCAAATGCACAGGGAGGTAATCGA
AAATTGCGGTTTTTGTTAACAGCAACTGATAAAGCTATTGCCCCACAAGCTATTGATTTATCTTTAACGATTAAACCACA
ATTGTCAATGCAACCAAATAGCCTAAACTTCGATTCTGTAGAAGCAGGAAAAACTAGCCAAAAGCAAACTTTAGTAATTC
GCAGCAATATATCTGGAACAGCTAGTTTACAACTGCAAGGCAAGACTAAAGATGTTTCTTTAAAGGAGCCTTCAACACCT
GTATCTTTGGCAGTCGGAGAAACCAAAATCCCTATACAGCTTGAAGTTGCTGATAGTAGTTTTGATGGTAAGCGTACATT
CAATGTAGTTGTTACTCCAGATCACCCCCTGACGAATCCCCTCAGTGCCGAAGTTCAGGTACGGATCTTAATGCCACTGG
GACGGAAAATCGTTATTTGGTTGCTATTGATATTACTGCTTTTCTTAATTACCTTAACCATAATTTGCTTGATTCAACGT
AAAACTCCTTGGGAATTAGCCCAAGATATTGGCACTCGCAACCATTTAGAAGGGGAACTAGAACTATTAGAACCAGTCCC
CATATCACCAGAAGAACAATATATTAGCCTTACTCACCAGCACAAGCAAAAAGTCAACTTGAGTGCATTAGTTCCAGCGA
TCGCCTCTACAAATAGTGATGCAGAATTAGTCATCAATTGGCAGTCTGGTAAAAAATATGTATATGTACGGAGTTTAAGC
GGTATTACTTTTGTCAATAATGAAAAGATAACTACATATCAACTTTACGATGAAGACACAATCCAGGTTGATAACGTAAA
GCTGCGATTTAACTGGATTGGTAATCAACGGCCCTATGAACAAAACAGTGGGCTGACAGATTTTTAA

Upstream 100 bases:

>100_bases
AAGATGGTCAAAATATTTTGGCTAAATATCACTGAAAATAGATTCATTACCCATTAATTTCCAGAAAAAGTCATAAATTT
ATGACTGGAGACATCTATCC

Downstream 100 bases:

>100_bases
AAAATATTAGAGGAAATTAAATGTCACGTCCCACAGTTGTTTTTCGCCCTACTGTTGTCATCGGTTTAGGAGGTACGGGT
TATGAAGTTGCACTCAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 608

Protein sequence:

>608_residues
MNFNYLRYFLKFTSIPSICLLLILSISHFSRVLAQNPKGGIDWIVVVDTSASMRGVGGTRNIFTQVKNSINEFVNTARVG
DTVTIYNFDSDVTLQAQEIPIASNPDRGKLKQIINNLKADGVRTHTGKAVQQALSTSAKLNQRPNTADRTVSIVFLTDGL
EDVQGIPNPVPIPQSTQLLREQECKPYVFFVSLGLKEHEKQLNEFASNPALCGKGRVLRDPGGVQLNKLAQNIRPRLIKP
QIDVSLSTVDLPPVLPGTTTKALNINSISNVNAKVRLQLKDIEKSGIRLVLPSTIDLAANQQKVIPISLQIPANAQGGNR
KLRFLLTATDKAIAPQAIDLSLTIKPQLSMQPNSLNFDSVEAGKTSQKQTLVIRSNISGTASLQLQGKTKDVSLKEPSTP
VSLAVGETKIPIQLEVADSSFDGKRTFNVVVTPDHPLTNPLSAEVQVRILMPLGRKIVIWLLLILLLFLITLTIICLIQR
KTPWELAQDIGTRNHLEGELELLEPVPISPEEQYISLTHQHKQKVNLSALVPAIASTNSDAELVINWQSGKKYVYVRSLS
GITFVNNEKITTYQLYDEDTIQVDNVKLRFNWIGNQRPYEQNSGLTDF

Sequences:

>Translated_608_residues
MNFNYLRYFLKFTSIPSICLLLILSISHFSRVLAQNPKGGIDWIVVVDTSASMRGVGGTRNIFTQVKNSINEFVNTARVG
DTVTIYNFDSDVTLQAQEIPIASNPDRGKLKQIINNLKADGVRTHTGKAVQQALSTSAKLNQRPNTADRTVSIVFLTDGL
EDVQGIPNPVPIPQSTQLLREQECKPYVFFVSLGLKEHEKQLNEFASNPALCGKGRVLRDPGGVQLNKLAQNIRPRLIKP
QIDVSLSTVDLPPVLPGTTTKALNINSISNVNAKVRLQLKDIEKSGIRLVLPSTIDLAANQQKVIPISLQIPANAQGGNR
KLRFLLTATDKAIAPQAIDLSLTIKPQLSMQPNSLNFDSVEAGKTSQKQTLVIRSNISGTASLQLQGKTKDVSLKEPSTP
VSLAVGETKIPIQLEVADSSFDGKRTFNVVVTPDHPLTNPLSAEVQVRILMPLGRKIVIWLLLILLLFLITLTIICLIQR
KTPWELAQDIGTRNHLEGELELLEPVPISPEEQYISLTHQHKQKVNLSALVPAIASTNSDAELVINWQSGKKYVYVRSLS
GITFVNNEKITTYQLYDEDTIQVDNVKLRFNWIGNQRPYEQNSGLTDF
>Mature_608_residues
MNFNYLRYFLKFTSIPSICLLLILSISHFSRVLAQNPKGGIDWIVVVDTSASMRGVGGTRNIFTQVKNSINEFVNTARVG
DTVTIYNFDSDVTLQAQEIPIASNPDRGKLKQIINNLKADGVRTHTGKAVQQALSTSAKLNQRPNTADRTVSIVFLTDGL
EDVQGIPNPVPIPQSTQLLREQECKPYVFFVSLGLKEHEKQLNEFASNPALCGKGRVLRDPGGVQLNKLAQNIRPRLIKP
QIDVSLSTVDLPPVLPGTTTKALNINSISNVNAKVRLQLKDIEKSGIRLVLPSTIDLAANQQKVIPISLQIPANAQGGNR
KLRFLLTATDKAIAPQAIDLSLTIKPQLSMQPNSLNFDSVEAGKTSQKQTLVIRSNISGTASLQLQGKTKDVSLKEPSTP
VSLAVGETKIPIQLEVADSSFDGKRTFNVVVTPDHPLTNPLSAEVQVRILMPLGRKIVIWLLLILLLFLITLTIICLIQR
KTPWELAQDIGTRNHLEGELELLEPVPISPEEQYISLTHQHKQKVNLSALVPAIASTNSDAELVINWQSGKKYVYVRSLS
GITFVNNEKITTYQLYDEDTIQVDNVKLRFNWIGNQRPYEQNSGLTDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67185; Mature: 67185

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFNYLRYFLKFTSIPSICLLLILSISHFSRVLAQNPKGGIDWIVVVDTSASMRGVGGTR
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHH
NIFTQVKNSINEFVNTARVGDTVTIYNFDSDVTLQAQEIPIASNPDRGKLKQIINNLKAD
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCC
GVRTHTGKAVQQALSTSAKLNQRPNTADRTVSIVFLTDGLEDVQGIPNPVPIPQSTQLLR
CEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHCCCCCCCCCCHHHHHH
EQECKPYVFFVSLGLKEHEKQLNEFASNPALCGKGRVLRDPGGVQLNKLAQNIRPRLIKP
HCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCCCEECC
QIDVSLSTVDLPPVLPGTTTKALNINSISNVNAKVRLQLKDIEKSGIRLVLPSTIDLAAN
CCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCEEEECCCEECCCC
QQKVIPISLQIPANAQGGNRKLRFLLTATDKAIAPQAIDLSLTIKPQLSMQPNSLNFDSV
CCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
EAGKTSQKQTLVIRSNISGTASLQLQGKTKDVSLKEPSTPVSLAVGETKIPIQLEVADSS
CCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEECCEECEEEEEECCCC
FDGKRTFNVVVTPDHPLTNPLSAEVQVRILMPLGRKIVIWLLLILLLFLITLTIICLIQR
CCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC
KTPWELAQDIGTRNHLEGELELLEPVPISPEEQYISLTHQHKQKVNLSALVPAIASTNSD
CCCHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
AELVINWQSGKKYVYVRSLSGITFVNNEKITTYQLYDEDTIQVDNVKLRFNWIGNQRPYE
CEEEEEEECCCEEEEEEECCCEEEECCCEEEEEEEECCCEEEEEEEEEEEEEECCCCCCC
QNSGLTDF
CCCCCCCC
>Mature Secondary Structure
MNFNYLRYFLKFTSIPSICLLLILSISHFSRVLAQNPKGGIDWIVVVDTSASMRGVGGTR
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHH
NIFTQVKNSINEFVNTARVGDTVTIYNFDSDVTLQAQEIPIASNPDRGKLKQIINNLKAD
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCC
GVRTHTGKAVQQALSTSAKLNQRPNTADRTVSIVFLTDGLEDVQGIPNPVPIPQSTQLLR
CEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHCCCCCCCCCCHHHHHH
EQECKPYVFFVSLGLKEHEKQLNEFASNPALCGKGRVLRDPGGVQLNKLAQNIRPRLIKP
HCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCCCEECC
QIDVSLSTVDLPPVLPGTTTKALNINSISNVNAKVRLQLKDIEKSGIRLVLPSTIDLAAN
CCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCEEEECCCEECCCC
QQKVIPISLQIPANAQGGNRKLRFLLTATDKAIAPQAIDLSLTIKPQLSMQPNSLNFDSV
CCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
EAGKTSQKQTLVIRSNISGTASLQLQGKTKDVSLKEPSTPVSLAVGETKIPIQLEVADSS
CCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEECCEECEEEEEECCCC
FDGKRTFNVVVTPDHPLTNPLSAEVQVRILMPLGRKIVIWLLLILLLFLITLTIICLIQR
CCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC
KTPWELAQDIGTRNHLEGELELLEPVPISPEEQYISLTHQHKQKVNLSALVPAIASTNSD
CCCHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
AELVINWQSGKKYVYVRSLSGITFVNNEKITTYQLYDEDTIQVDNVKLRFNWIGNQRPYE
CEEEEEEECCCEEEEEEECCCEEEECCCEEEEEEEECCCEEEEEEEEEEEEEECCCCCCC
QNSGLTDF
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA