| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229534
Identifier: 17229534
GI number: 17229534
Start: 2442745
End: 2444571
Strand: Direct
Name: 17229534
Synonym: alr2042
Alternate gene names: NA
Gene position: 2442745-2444571 (Clockwise)
Preceding gene: 17229533
Following gene: 17229535
Centisome position: 38.09
GC content: 37.77
Gene sequence:
>1827_bases ATGAATTTTAATTACTTGAGATATTTTTTGAAATTTACTTCAATACCCAGTATTTGTCTCTTGTTGATATTATCAATTTC TCATTTTTCTAGGGTATTGGCTCAAAATCCCAAAGGTGGAATTGACTGGATTGTAGTAGTAGATACTTCTGCTTCCATGC GCGGTGTTGGCGGGACAAGAAATATCTTTACTCAAGTCAAAAATTCTATTAATGAATTTGTTAATACTGCCAGAGTAGGG GATACAGTTACTATTTATAATTTCGATAGTGATGTAACTTTGCAAGCTCAAGAAATTCCTATTGCCAGCAATCCAGACCG GGGTAAACTCAAACAAATAATTAATAACCTCAAAGCTGATGGTGTGCGTACTCACACAGGGAAAGCAGTACAACAAGCGC TCTCTACTTCTGCAAAATTGAATCAACGTCCTAATACTGCGGATAGGACTGTGAGTATAGTTTTCCTAACAGATGGATTG GAAGATGTCCAAGGTATTCCTAATCCTGTGCCGATTCCTCAAAGTACGCAACTTTTACGGGAACAAGAATGTAAACCTTA TGTATTTTTCGTATCTTTAGGATTGAAAGAACACGAAAAACAATTAAATGAATTTGCCAGTAATCCCGCACTTTGTGGCA AAGGGCGCGTTTTGCGTGACCCTGGAGGAGTGCAATTAAACAAGTTGGCTCAAAATATTAGGCCAAGACTCATTAAACCC CAGATTGATGTTAGTTTATCTACTGTTGATTTGCCGCCTGTATTGCCAGGTACAACTACAAAAGCACTAAATATTAATAG CATCAGTAATGTCAATGCTAAAGTGAGGTTGCAACTAAAAGACATAGAAAAAAGTGGTATTCGCCTAGTTTTGCCTAGCA CAATTGACTTAGCAGCTAATCAACAAAAAGTTATTCCTATAAGTTTACAAATTCCAGCAAATGCACAGGGAGGTAATCGA AAATTGCGGTTTTTGTTAACAGCAACTGATAAAGCTATTGCCCCACAAGCTATTGATTTATCTTTAACGATTAAACCACA ATTGTCAATGCAACCAAATAGCCTAAACTTCGATTCTGTAGAAGCAGGAAAAACTAGCCAAAAGCAAACTTTAGTAATTC GCAGCAATATATCTGGAACAGCTAGTTTACAACTGCAAGGCAAGACTAAAGATGTTTCTTTAAAGGAGCCTTCAACACCT GTATCTTTGGCAGTCGGAGAAACCAAAATCCCTATACAGCTTGAAGTTGCTGATAGTAGTTTTGATGGTAAGCGTACATT CAATGTAGTTGTTACTCCAGATCACCCCCTGACGAATCCCCTCAGTGCCGAAGTTCAGGTACGGATCTTAATGCCACTGG GACGGAAAATCGTTATTTGGTTGCTATTGATATTACTGCTTTTCTTAATTACCTTAACCATAATTTGCTTGATTCAACGT AAAACTCCTTGGGAATTAGCCCAAGATATTGGCACTCGCAACCATTTAGAAGGGGAACTAGAACTATTAGAACCAGTCCC CATATCACCAGAAGAACAATATATTAGCCTTACTCACCAGCACAAGCAAAAAGTCAACTTGAGTGCATTAGTTCCAGCGA TCGCCTCTACAAATAGTGATGCAGAATTAGTCATCAATTGGCAGTCTGGTAAAAAATATGTATATGTACGGAGTTTAAGC GGTATTACTTTTGTCAATAATGAAAAGATAACTACATATCAACTTTACGATGAAGACACAATCCAGGTTGATAACGTAAA GCTGCGATTTAACTGGATTGGTAATCAACGGCCCTATGAACAAAACAGTGGGCTGACAGATTTTTAA
Upstream 100 bases:
>100_bases AAGATGGTCAAAATATTTTGGCTAAATATCACTGAAAATAGATTCATTACCCATTAATTTCCAGAAAAAGTCATAAATTT ATGACTGGAGACATCTATCC
Downstream 100 bases:
>100_bases AAAATATTAGAGGAAATTAAATGTCACGTCCCACAGTTGTTTTTCGCCCTACTGTTGTCATCGGTTTAGGAGGTACGGGT TATGAAGTTGCACTCAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 608; Mature: 608
Protein sequence:
>608_residues MNFNYLRYFLKFTSIPSICLLLILSISHFSRVLAQNPKGGIDWIVVVDTSASMRGVGGTRNIFTQVKNSINEFVNTARVG DTVTIYNFDSDVTLQAQEIPIASNPDRGKLKQIINNLKADGVRTHTGKAVQQALSTSAKLNQRPNTADRTVSIVFLTDGL EDVQGIPNPVPIPQSTQLLREQECKPYVFFVSLGLKEHEKQLNEFASNPALCGKGRVLRDPGGVQLNKLAQNIRPRLIKP QIDVSLSTVDLPPVLPGTTTKALNINSISNVNAKVRLQLKDIEKSGIRLVLPSTIDLAANQQKVIPISLQIPANAQGGNR KLRFLLTATDKAIAPQAIDLSLTIKPQLSMQPNSLNFDSVEAGKTSQKQTLVIRSNISGTASLQLQGKTKDVSLKEPSTP VSLAVGETKIPIQLEVADSSFDGKRTFNVVVTPDHPLTNPLSAEVQVRILMPLGRKIVIWLLLILLLFLITLTIICLIQR KTPWELAQDIGTRNHLEGELELLEPVPISPEEQYISLTHQHKQKVNLSALVPAIASTNSDAELVINWQSGKKYVYVRSLS GITFVNNEKITTYQLYDEDTIQVDNVKLRFNWIGNQRPYEQNSGLTDF
Sequences:
>Translated_608_residues MNFNYLRYFLKFTSIPSICLLLILSISHFSRVLAQNPKGGIDWIVVVDTSASMRGVGGTRNIFTQVKNSINEFVNTARVG DTVTIYNFDSDVTLQAQEIPIASNPDRGKLKQIINNLKADGVRTHTGKAVQQALSTSAKLNQRPNTADRTVSIVFLTDGL EDVQGIPNPVPIPQSTQLLREQECKPYVFFVSLGLKEHEKQLNEFASNPALCGKGRVLRDPGGVQLNKLAQNIRPRLIKP QIDVSLSTVDLPPVLPGTTTKALNINSISNVNAKVRLQLKDIEKSGIRLVLPSTIDLAANQQKVIPISLQIPANAQGGNR KLRFLLTATDKAIAPQAIDLSLTIKPQLSMQPNSLNFDSVEAGKTSQKQTLVIRSNISGTASLQLQGKTKDVSLKEPSTP VSLAVGETKIPIQLEVADSSFDGKRTFNVVVTPDHPLTNPLSAEVQVRILMPLGRKIVIWLLLILLLFLITLTIICLIQR KTPWELAQDIGTRNHLEGELELLEPVPISPEEQYISLTHQHKQKVNLSALVPAIASTNSDAELVINWQSGKKYVYVRSLS GITFVNNEKITTYQLYDEDTIQVDNVKLRFNWIGNQRPYEQNSGLTDF >Mature_608_residues MNFNYLRYFLKFTSIPSICLLLILSISHFSRVLAQNPKGGIDWIVVVDTSASMRGVGGTRNIFTQVKNSINEFVNTARVG DTVTIYNFDSDVTLQAQEIPIASNPDRGKLKQIINNLKADGVRTHTGKAVQQALSTSAKLNQRPNTADRTVSIVFLTDGL EDVQGIPNPVPIPQSTQLLREQECKPYVFFVSLGLKEHEKQLNEFASNPALCGKGRVLRDPGGVQLNKLAQNIRPRLIKP QIDVSLSTVDLPPVLPGTTTKALNINSISNVNAKVRLQLKDIEKSGIRLVLPSTIDLAANQQKVIPISLQIPANAQGGNR KLRFLLTATDKAIAPQAIDLSLTIKPQLSMQPNSLNFDSVEAGKTSQKQTLVIRSNISGTASLQLQGKTKDVSLKEPSTP VSLAVGETKIPIQLEVADSSFDGKRTFNVVVTPDHPLTNPLSAEVQVRILMPLGRKIVIWLLLILLLFLITLTIICLIQR KTPWELAQDIGTRNHLEGELELLEPVPISPEEQYISLTHQHKQKVNLSALVPAIASTNSDAELVINWQSGKKYVYVRSLS GITFVNNEKITTYQLYDEDTIQVDNVKLRFNWIGNQRPYEQNSGLTDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67185; Mature: 67185
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFNYLRYFLKFTSIPSICLLLILSISHFSRVLAQNPKGGIDWIVVVDTSASMRGVGGTR CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHH NIFTQVKNSINEFVNTARVGDTVTIYNFDSDVTLQAQEIPIASNPDRGKLKQIINNLKAD HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCC GVRTHTGKAVQQALSTSAKLNQRPNTADRTVSIVFLTDGLEDVQGIPNPVPIPQSTQLLR CEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHCCCCCCCCCCHHHHHH EQECKPYVFFVSLGLKEHEKQLNEFASNPALCGKGRVLRDPGGVQLNKLAQNIRPRLIKP HCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCCCEECC QIDVSLSTVDLPPVLPGTTTKALNINSISNVNAKVRLQLKDIEKSGIRLVLPSTIDLAAN CCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCEEEECCCEECCCC QQKVIPISLQIPANAQGGNRKLRFLLTATDKAIAPQAIDLSLTIKPQLSMQPNSLNFDSV CCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC EAGKTSQKQTLVIRSNISGTASLQLQGKTKDVSLKEPSTPVSLAVGETKIPIQLEVADSS CCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEECCEECEEEEEECCCC FDGKRTFNVVVTPDHPLTNPLSAEVQVRILMPLGRKIVIWLLLILLLFLITLTIICLIQR CCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC KTPWELAQDIGTRNHLEGELELLEPVPISPEEQYISLTHQHKQKVNLSALVPAIASTNSD CCCHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCC AELVINWQSGKKYVYVRSLSGITFVNNEKITTYQLYDEDTIQVDNVKLRFNWIGNQRPYE CEEEEEEECCCEEEEEEECCCEEEECCCEEEEEEEECCCEEEEEEEEEEEEEECCCCCCC QNSGLTDF CCCCCCCC >Mature Secondary Structure MNFNYLRYFLKFTSIPSICLLLILSISHFSRVLAQNPKGGIDWIVVVDTSASMRGVGGTR CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCHH NIFTQVKNSINEFVNTARVGDTVTIYNFDSDVTLQAQEIPIASNPDRGKLKQIINNLKAD HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCC GVRTHTGKAVQQALSTSAKLNQRPNTADRTVSIVFLTDGLEDVQGIPNPVPIPQSTQLLR CEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHCCCCCCCCCCHHHHHH EQECKPYVFFVSLGLKEHEKQLNEFASNPALCGKGRVLRDPGGVQLNKLAQNIRPRLIKP HCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHCCCCEECC QIDVSLSTVDLPPVLPGTTTKALNINSISNVNAKVRLQLKDIEKSGIRLVLPSTIDLAAN CCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCEEEECCCEECCCC QQKVIPISLQIPANAQGGNRKLRFLLTATDKAIAPQAIDLSLTIKPQLSMQPNSLNFDSV CCEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC EAGKTSQKQTLVIRSNISGTASLQLQGKTKDVSLKEPSTPVSLAVGETKIPIQLEVADSS CCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEECCEECEEEEEECCCC FDGKRTFNVVVTPDHPLTNPLSAEVQVRILMPLGRKIVIWLLLILLLFLITLTIICLIQR CCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCC KTPWELAQDIGTRNHLEGELELLEPVPISPEEQYISLTHQHKQKVNLSALVPAIASTNSD CCCHHHHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCC AELVINWQSGKKYVYVRSLSGITFVNNEKITTYQLYDEDTIQVDNVKLRFNWIGNQRPYE CEEEEEEECCCEEEEEEECCCEEEECCCEEEEEEEECCCEEEEEEEEEEEEEECCCCCCC QNSGLTDF CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA