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The map label for this gene is padR [H]

Identifier: 17229510

GI number: 17229510

Start: 2411491

End: 2412141

Strand: Direct

Name: padR [H]

Synonym: alr2018

Alternate gene names: 17229510

Gene position: 2411491-2412141 (Clockwise)

Preceding gene: 17229508

Following gene: 17229511

Centisome position: 37.6

GC content: 38.86

Gene sequence:

>651_bases
ATGCTTTCGTTTTGGCATTTGTTTTTTATATATGAATATTCATATATTAGCATAATCAATATAGGAGCTATCAAAGGCAG
TATTTACTACTTTATTTTCGGAAAACCGTCTATGTCCTTAGCATATATAATTCTCGGTTTCCTACAAAAAGAAGATATGA
CAGGTTACGACCTCAAGACAAATTGTTTCGATCAATGTATTGCTCACTTATGGCCAGCCGATCAAGGACAGATTTATAAG
ACGCTCGATAAGCTTTTTGAGCAGGGTTGGATTAATTGCCATGTTGAGATTCAGCACGATCGCCCCAACCGTAAAGTCTA
TAGTCTCACAGAAATGGGCAAAACCGAGTTTGTACGGTGGCTGCAATCCCCCCAGCCCTTGCCTATAGTCAGAGAACCTT
TACTTGTACAATTATTTTTTGCAGCTCAGTTATCGAATGAGGCGATCGCTAGTCTACTACAACAGCAGCTAGCAGCTCAC
TATGAAAAAATCAGCAATTGTGAAGCCATCAACTTTCCACCGGTTGAAGATGAAGTGGAGATTCGTGAGCAATTAATACA
TAGGCTAATGGTGGAATTAATCGTGCGTCGTGAGGAAACTTATATTGACTGGTTAAAGTCAGCTATCAAAACACTAACAG
TTGATAATTAA

Upstream 100 bases:

>100_bases
CAATTATGCTTTGTGTATGATGGATTTGTGGTCTGTAAGTTCCGAAAATATAGCGCAGACTCTTTGTCTGCCATCAACAA
AGTAAATATTATTGTTGAGA

Downstream 100 bases:

>100_bases
GATACTTCCTCTAAGTAACTATTATTTTTTATTACATTAAAATTAGTATTTTGAAGTTATCTAAAGTTATAATATCAATT
ATATCAAAATCCTCATTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MLSFWHLFFIYEYSYISIINIGAIKGSIYYFIFGKPSMSLAYIILGFLQKEDMTGYDLKTNCFDQCIAHLWPADQGQIYK
TLDKLFEQGWINCHVEIQHDRPNRKVYSLTEMGKTEFVRWLQSPQPLPIVREPLLVQLFFAAQLSNEAIASLLQQQLAAH
YEKISNCEAINFPPVEDEVEIREQLIHRLMVELIVRREETYIDWLKSAIKTLTVDN

Sequences:

>Translated_216_residues
MLSFWHLFFIYEYSYISIINIGAIKGSIYYFIFGKPSMSLAYIILGFLQKEDMTGYDLKTNCFDQCIAHLWPADQGQIYK
TLDKLFEQGWINCHVEIQHDRPNRKVYSLTEMGKTEFVRWLQSPQPLPIVREPLLVQLFFAAQLSNEAIASLLQQQLAAH
YEKISNCEAINFPPVEDEVEIREQLIHRLMVELIVRREETYIDWLKSAIKTLTVDN
>Mature_216_residues
MLSFWHLFFIYEYSYISIINIGAIKGSIYYFIFGKPSMSLAYIILGFLQKEDMTGYDLKTNCFDQCIAHLWPADQGQIYK
TLDKLFEQGWINCHVEIQHDRPNRKVYSLTEMGKTEFVRWLQSPQPLPIVREPLLVQLFFAAQLSNEAIASLLQQQLAAH
YEKISNCEAINFPPVEDEVEIREQLIHRLMVELIVRREETYIDWLKSAIKTLTVDN

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 25346; Mature: 25346

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSFWHLFFIYEYSYISIINIGAIKGSIYYFIFGKPSMSLAYIILGFLQKEDMTGYDLKT
CCHHHHHHHHHHHHHHEEEEEEEEECEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCH
NCFDQCIAHLWPADQGQIYKTLDKLFEQGWINCHVEIQHDRPNRKVYSLTEMGKTEFVRW
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEHHHHCCHHHHHHH
LQSPQPLPIVREPLLVQLFFAAQLSNEAIASLLQQQLAAHYEKISNCEAINFPPVEDEVE
HCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
IREQLIHRLMVELIVRREETYIDWLKSAIKTLTVDN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLSFWHLFFIYEYSYISIINIGAIKGSIYYFIFGKPSMSLAYIILGFLQKEDMTGYDLKT
CCHHHHHHHHHHHHHHEEEEEEEEECEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCH
NCFDQCIAHLWPADQGQIYKTLDKLFEQGWINCHVEIQHDRPNRKVYSLTEMGKTEFVRW
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEHHHHCCHHHHHHH
LQSPQPLPIVREPLLVQLFFAAQLSNEAIASLLQQQLAAHYEKISNCEAINFPPVEDEVE
HCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
IREQLIHRLMVELIVRREETYIDWLKSAIKTLTVDN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]