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The map label for this gene is ychE [C]

Identifier: 17229492

GI number: 17229492

Start: 2393179

End: 2393772

Strand: Reverse

Name: ychE [C]

Synonym: all2000

Alternate gene names: 17229492

Gene position: 2393772-2393179 (Counterclockwise)

Preceding gene: 17229494

Following gene: 17229488

Centisome position: 37.32

GC content: 43.77

Gene sequence:

>594_bases
GTGGATACATCTATTCTGATTCAAACTTTTATTGCTGTGTTCGTCTTGGCAGATGCGATAGGTAATATACCCATAGTTTT
AGCTTTAACCAAGGGTATGGAACCGGAGGATAGGAATAGAGTAATTGATAAAGCGAGTATTGTGGCGATCGCAGTTCTAT
TACTATTTGCCTTTGGTGGTCAATATATTTTGACTTATTTAGAAATTAGCATGGCATCCTTACGGGTAGCCGGGGGGTTG
CTGTTGCTGTTAATTGCTTTGCAAATGCTGCGGGGAGAATTGGAGACACCAATTACCGAAGAAGGAAGGGATGTGGCAAT
TACACCCTTGGCTTTGCCATTGTTAGCCGGGCCGGGTACGCTAACAACAGTGATGTTATTTATGTCTAAATCCCAAAGTC
CACATTTGGCTGTAGTGTTAGGGATTTTGGCGGCGATGTTTGTTACTTGGTTGATTTTGCGCCTAGCAAATCCCATAGAA
AAACGGATTGGTGTAGAAGGTGGGGTAATTGTCACCCAGCTTTTGGGTTTTCTCTTGGCGGCGTTGGCAGTGGAGATTGG
TAGTACAGGGATTCGGGAGTTATTTTTGCAGTGA

Upstream 100 bases:

>100_bases
CGACCACTGACAACTAACTAATTCAATCATCCTACGGGCTATAGCCAACTGAACCCACTCAAGGTAAGTTGTTATCAAAC
TTTGATAAAAGCGCATTGCT

Downstream 100 bases:

>100_bases
GTTGATTCTTTACTAATGGGTAATTGAGAATCAGTTCTTATCAATCACCCATTACCAGCTATTCATCTTTCAAATTAAAC
CTTCCGATTCGGCAAATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MDTSILIQTFIAVFVLADAIGNIPIVLALTKGMEPEDRNRVIDKASIVAIAVLLLFAFGGQYILTYLEISMASLRVAGGL
LLLLIALQMLRGELETPITEEGRDVAITPLALPLLAGPGTLTTVMLFMSKSQSPHLAVVLGILAAMFVTWLILRLANPIE
KRIGVEGGVIVTQLLGFLLAALAVEIGSTGIRELFLQ

Sequences:

>Translated_197_residues
MDTSILIQTFIAVFVLADAIGNIPIVLALTKGMEPEDRNRVIDKASIVAIAVLLLFAFGGQYILTYLEISMASLRVAGGL
LLLLIALQMLRGELETPITEEGRDVAITPLALPLLAGPGTLTTVMLFMSKSQSPHLAVVLGILAAMFVTWLILRLANPIE
KRIGVEGGVIVTQLLGFLLAALAVEIGSTGIRELFLQ
>Mature_197_residues
MDTSILIQTFIAVFVLADAIGNIPIVLALTKGMEPEDRNRVIDKASIVAIAVLLLFAFGGQYILTYLEISMASLRVAGGL
LLLLIALQMLRGELETPITEEGRDVAITPLALPLLAGPGTLTTVMLFMSKSQSPHLAVVLGILAAMFVTWLILRLANPIE
KRIGVEGGVIVTQLLGFLLAALAVEIGSTGIRELFLQ

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=207, Percent_Identity=28.9855072463768, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1789842, Length=189, Percent_Identity=29.1005291005291, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1787809, Length=198, Percent_Identity=27.7777777777778, Blast_Score=71, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21033; Mature: 21033

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSILIQTFIAVFVLADAIGNIPIVLALTKGMEPEDRNRVIDKASIVAIAVLLLFAFGG
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCH
QYILTYLEISMASLRVAGGLLLLLIALQMLRGELETPITEEGRDVAITPLALPLLAGPGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHCCCHH
LTTVMLFMSKSQSPHLAVVLGILAAMFVTWLILRLANPIEKRIGVEGGVIVTQLLGFLLA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ALAVEIGSTGIRELFLQ
HHHHHHCCHHHHHHHCC
>Mature Secondary Structure
MDTSILIQTFIAVFVLADAIGNIPIVLALTKGMEPEDRNRVIDKASIVAIAVLLLFAFGG
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCH
QYILTYLEISMASLRVAGGLLLLLIALQMLRGELETPITEEGRDVAITPLALPLLAGPGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHCCCHH
LTTVMLFMSKSQSPHLAVVLGILAAMFVTWLILRLANPIEKRIGVEGGVIVTQLLGFLLA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ALAVEIGSTGIRELFLQ
HHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]