Click here to switch to the map view.

The map label for this gene is 17229489

Identifier: 17229489

GI number: 17229489

Start: 2389848

End: 2390750

Strand: Direct

Name: 17229489

Synonym: alr1997

Alternate gene names: NA

Gene position: 2389848-2390750 (Clockwise)

Preceding gene: 17229474

Following gene: 17229490

Centisome position: 37.26

GC content: 46.18

Gene sequence:

>903_bases
ATGTTGCTCAAAGATATACGGGATTATCAAATTATTTTTCTGAGCTTGTTTCTCATACTAGGGATTAGTACAAGGGACTG
GACATTGCGACCGGAATTAATAGGAGTAGCGATCGCCACCTGTCTATTAACACAATGGCTATTGTCGCTGGTGAAACAAG
GCAGGGGGCAGGGGGCAGGGGGCAGGGGAGAAGAAATGTCTCCAAGCCCTACTTCCTATTGCCCATTCCCTGAAATAAAT
CTCCGCAGTGCGTTGATTACCTCCTTGGGACTAAGCTTATTGTTGCGTGCTGACCATTGGACAACAATGGCTTTAGCCGC
AGCTAGCGCGATCGCTAGTAAATTTGTTTTTCAAGTCAACAATAAGCATTTCTTCAACCCGGCTAATTTTGGCATCATCT
CTGCCTTGGCTTTAACTCCTGATGCTTGGGTTTCCCCTGGTCGGTGGGGTGAAGAGTGGTGGTATGGGCTGTTATTCGTT
GGTGCTGGTGGCATGATTTTACAGCGTATCGGTCGCTGGGATACAACAGCCGCTTTTTTAGGAAGCTACTCGTTACTAGA
AGCCATGCGTAATCTCTGGTTGGGCTGGACTTGGGATGTTTATTGGCATCGATTGATGAGTGGGTCTTTATTGCTGTTTG
CCTTATTTATGATTACAGACCCCCGGTCAATTCCTAATGCCCGAATTGGGCGGATTGTTTGGGCATTTAGCATTGCCATT
TTCACGTTTATTTTGCGGAACTATTTCTTTGTTCCCACCGCAGTTTTTTGGGTATTGTTCGCCTTTGCACCTTTGACCAT
TTTCTTTGATGTTCTCTGGTCAGCCCCACTGTTTTCTTGGTTGGGGGAGTCACCCCCGTCACTTCGTGACGAGAATTCAA
AATTAAAGAATTCCTGTCCCTAA

Upstream 100 bases:

>100_bases
AAGCTTGACTTGTAACAAAATCTGTAACGGCAATATGATTTAGGTTTGAACTCGCTTAGATTAAGGGAAAATCTAGGGGA
AATCCCTGAATAAAGGGTTA

Downstream 100 bases:

>100_bases
TATTCCTCATCTTTTCACAACAGAGGTATAACATGAAGCGTTTGAAATTACTTGTTCCTTTGTTCTTGGTAATGCTTGCT
GTGCTGTGCTTTGCACCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MLLKDIRDYQIIFLSLFLILGISTRDWTLRPELIGVAIATCLLTQWLLSLVKQGRGQGAGGRGEEMSPSPTSYCPFPEIN
LRSALITSLGLSLLLRADHWTTMALAAASAIASKFVFQVNNKHFFNPANFGIISALALTPDAWVSPGRWGEEWWYGLLFV
GAGGMILQRIGRWDTTAAFLGSYSLLEAMRNLWLGWTWDVYWHRLMSGSLLLFALFMITDPRSIPNARIGRIVWAFSIAI
FTFILRNYFFVPTAVFWVLFAFAPLTIFFDVLWSAPLFSWLGESPPSLRDENSKLKNSCP

Sequences:

>Translated_300_residues
MLLKDIRDYQIIFLSLFLILGISTRDWTLRPELIGVAIATCLLTQWLLSLVKQGRGQGAGGRGEEMSPSPTSYCPFPEIN
LRSALITSLGLSLLLRADHWTTMALAAASAIASKFVFQVNNKHFFNPANFGIISALALTPDAWVSPGRWGEEWWYGLLFV
GAGGMILQRIGRWDTTAAFLGSYSLLEAMRNLWLGWTWDVYWHRLMSGSLLLFALFMITDPRSIPNARIGRIVWAFSIAI
FTFILRNYFFVPTAVFWVLFAFAPLTIFFDVLWSAPLFSWLGESPPSLRDENSKLKNSCP
>Mature_300_residues
MLLKDIRDYQIIFLSLFLILGISTRDWTLRPELIGVAIATCLLTQWLLSLVKQGRGQGAGGRGEEMSPSPTSYCPFPEIN
LRSALITSLGLSLLLRADHWTTMALAAASAIASKFVFQVNNKHFFNPANFGIISALALTPDAWVSPGRWGEEWWYGLLFV
GAGGMILQRIGRWDTTAAFLGSYSLLEAMRNLWLGWTWDVYWHRLMSGSLLLFALFMITDPRSIPNARIGRIVWAFSIAI
FTFILRNYFFVPTAVFWVLFAFAPLTIFFDVLWSAPLFSWLGESPPSLRDENSKLKNSCP

Specific function: Unknown

COG id: COG1805

COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33829; Mature: 33829

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKDIRDYQIIFLSLFLILGISTRDWTLRPELIGVAIATCLLTQWLLSLVKQGRGQGAG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GRGEEMSPSPTSYCPFPEINLRSALITSLGLSLLLRADHWTTMALAAASAIASKFVFQVN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEC
NKHFFNPANFGIISALALTPDAWVSPGRWGEEWWYGLLFVGAGGMILQRIGRWDTTAAFL
CCEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH
GSYSLLEAMRNLWLGWTWDVYWHRLMSGSLLLFALFMITDPRSIPNARIGRIVWAFSIAI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
FTFILRNYFFVPTAVFWVLFAFAPLTIFFDVLWSAPLFSWLGESPPSLRDENSKLKNSCP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC
>Mature Secondary Structure
MLLKDIRDYQIIFLSLFLILGISTRDWTLRPELIGVAIATCLLTQWLLSLVKQGRGQGAG
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GRGEEMSPSPTSYCPFPEINLRSALITSLGLSLLLRADHWTTMALAAASAIASKFVFQVN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEC
NKHFFNPANFGIISALALTPDAWVSPGRWGEEWWYGLLFVGAGGMILQRIGRWDTTAAFL
CCEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHH
GSYSLLEAMRNLWLGWTWDVYWHRLMSGSLLLFALFMITDPRSIPNARIGRIVWAFSIAI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
FTFILRNYFFVPTAVFWVLFAFAPLTIFFDVLWSAPLFSWLGESPPSLRDENSKLKNSCP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA