| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229467
Identifier: 17229467
GI number: 17229467
Start: 2361824
End: 2362966
Strand: Reverse
Name: 17229467
Synonym: all1975
Alternate gene names: NA
Gene position: 2362966-2361824 (Counterclockwise)
Preceding gene: 17229472
Following gene: 17229466
Centisome position: 36.84
GC content: 39.63
Gene sequence:
>1143_bases ATGGAAATTAGCGAATTTAACAGTCTTGTTATTGGTTTAGCAGAGTTTGTCCGCCGAGATGGCAAGTATCCATATCCAGA ACTACTACGTCATGGTCTGAATAAACTAGCACTAGAGTTAACTGCTGTACCATATCCGCGTACTCTGAATGGTCTTTTAG TTCTACTGGAAAAACCTGTGAAAACTTGGTATCCAAGGCGCTTCATACCAAAAGAATTTGACTCAGATTTTGGCTTACTT TACGAAGGAGGACTTAGTGAAGAAGCAAATCGATACTTTTATGAAGAACTGCTTGAGCGGACAAAATTATCAGAGTCCGC AACTGCTACAACTCAGCAGATTGCTATAGAAAATCTCCAATTTCAAAGAATTTTGGCACGTTTACAAGAGTTATATAACA ACGATAGTAATCCTGAAAGTGTGCAAAGGGAATATGTTTTACTGCGTCGATTTCTGATTGAGAATCGATACACAACTAAG GCACATATCCGCAAAGTATTTTTGAAAACAAAATATATTCACATCCAAGAAGTTGGAGAACTCTATGATGAGTGTGAAAT AGAAGAGCCTTCCTGGAATTGCGATCGCTGCGGCCCTTTGTTTAAAAAGTATGGCAAGCTACGTGGTATTAAACCTAGTG TTTGCAACGACCATCGGCAAAGTCTGCCTTATGTGAAAAAGATTACATGGCAACATGGGTTGTGTCGCTTGAAGTTTGGG ATTCACTTGCGTATCTGTTTACCAGGAATACCGGAAATACGGTTATTTGAGATTTTGGCAGAACTACAAAGTAAATTCCC ACAACAGCTTTGCGCCATTCATCTTTACCCTGGCATTGATCGCTATGACTTACAACTGTGCTTCTGTGACCAAACAACCT GGGCTGTAGATATTAAGGATTATCAAAGTCCCTACAAGTTAGCACCGAAGTTAACACCTCTATTCAGCGAGGGAGATTTA CGTTATCACGAAAGTTTTTATGTCATTCCTATCGAACGTTTGCAACAAACACAGAATTATCTAGAAATTCTTCGGGAGCA GGCGGCAAAACTGCCAAGCAGTATTCATCTTTTGAGTGATGCTGTTTTTGAGAAACGAGTGATTAATAAAATTGAAAGCT TGCTGGAGGGGAATAGCCAATGA
Upstream 100 bases:
>100_bases GACACACCATAAATAATCCTGTATGGTATGTGCAACAAATGTATCATGAATGAAAAAAGCGTGGTGCTGAGTAAATCCTC TCAAAGAAGGATGATCGCTT
Downstream 100 bases:
>100_bases GCCAGAAGACCTTATTTGAGCTACCAAGAGAGTTTATAGACCGCCTCGAACAGTTGAAGGATGAAGGCTTGGAGCGTATT CAGGCTGAATTGCTACTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MEISEFNSLVIGLAEFVRRDGKYPYPELLRHGLNKLALELTAVPYPRTLNGLLVLLEKPVKTWYPRRFIPKEFDSDFGLL YEGGLSEEANRYFYEELLERTKLSESATATTQQIAIENLQFQRILARLQELYNNDSNPESVQREYVLLRRFLIENRYTTK AHIRKVFLKTKYIHIQEVGELYDECEIEEPSWNCDRCGPLFKKYGKLRGIKPSVCNDHRQSLPYVKKITWQHGLCRLKFG IHLRICLPGIPEIRLFEILAELQSKFPQQLCAIHLYPGIDRYDLQLCFCDQTTWAVDIKDYQSPYKLAPKLTPLFSEGDL RYHESFYVIPIERLQQTQNYLEILREQAAKLPSSIHLLSDAVFEKRVINKIESLLEGNSQ
Sequences:
>Translated_380_residues MEISEFNSLVIGLAEFVRRDGKYPYPELLRHGLNKLALELTAVPYPRTLNGLLVLLEKPVKTWYPRRFIPKEFDSDFGLL YEGGLSEEANRYFYEELLERTKLSESATATTQQIAIENLQFQRILARLQELYNNDSNPESVQREYVLLRRFLIENRYTTK AHIRKVFLKTKYIHIQEVGELYDECEIEEPSWNCDRCGPLFKKYGKLRGIKPSVCNDHRQSLPYVKKITWQHGLCRLKFG IHLRICLPGIPEIRLFEILAELQSKFPQQLCAIHLYPGIDRYDLQLCFCDQTTWAVDIKDYQSPYKLAPKLTPLFSEGDL RYHESFYVIPIERLQQTQNYLEILREQAAKLPSSIHLLSDAVFEKRVINKIESLLEGNSQ >Mature_380_residues MEISEFNSLVIGLAEFVRRDGKYPYPELLRHGLNKLALELTAVPYPRTLNGLLVLLEKPVKTWYPRRFIPKEFDSDFGLL YEGGLSEEANRYFYEELLERTKLSESATATTQQIAIENLQFQRILARLQELYNNDSNPESVQREYVLLRRFLIENRYTTK AHIRKVFLKTKYIHIQEVGELYDECEIEEPSWNCDRCGPLFKKYGKLRGIKPSVCNDHRQSLPYVKKITWQHGLCRLKFG IHLRICLPGIPEIRLFEILAELQSKFPQQLCAIHLYPGIDRYDLQLCFCDQTTWAVDIKDYQSPYKLAPKLTPLFSEGDL RYHESFYVIPIERLQQTQNYLEILREQAAKLPSSIHLLSDAVFEKRVINKIESLLEGNSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44600; Mature: 44600
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEISEFNSLVIGLAEFVRRDGKYPYPELLRHGLNKLALELTAVPYPRTLNGLLVLLEKPV CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KTWYPRRFIPKEFDSDFGLLYEGGLSEEANRYFYEELLERTKLSESATATTQQIAIENLQ HHHCCCCCCCHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FQRILARLQELYNNDSNPESVQREYVLLRRFLIENRYTTKAHIRKVFLKTKYIHIQEVGE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LYDECEIEEPSWNCDRCGPLFKKYGKLRGIKPSVCNDHRQSLPYVKKITWQHGLCRLKFG HHHHCCCCCCCCCCHHCCHHHHHHHHCCCCCCHHCCCHHHCCCHHHHHHHHCCCEEEEEC IHLRICLPGIPEIRLFEILAELQSKFPQQLCAIHLYPGIDRYDLQLCFCDQTTWAVDIKD CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCEEEEEHHH YQSPYKLAPKLTPLFSEGDLRYHESFYVIPIERLQQTQNYLEILREQAAKLPSSIHLLSD CCCCHHHCCCCCCCCCCCCCEECCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AVFEKRVINKIESLLEGNSQ HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEISEFNSLVIGLAEFVRRDGKYPYPELLRHGLNKLALELTAVPYPRTLNGLLVLLEKPV CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH KTWYPRRFIPKEFDSDFGLLYEGGLSEEANRYFYEELLERTKLSESATATTQQIAIENLQ HHHCCCCCCCHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FQRILARLQELYNNDSNPESVQREYVLLRRFLIENRYTTKAHIRKVFLKTKYIHIQEVGE HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LYDECEIEEPSWNCDRCGPLFKKYGKLRGIKPSVCNDHRQSLPYVKKITWQHGLCRLKFG HHHHCCCCCCCCCCHHCCHHHHHHHHCCCCCCHHCCCHHHCCCHHHHHHHHCCCEEEEEC IHLRICLPGIPEIRLFEILAELQSKFPQQLCAIHLYPGIDRYDLQLCFCDQTTWAVDIKD CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEEECCCEEEEEHHH YQSPYKLAPKLTPLFSEGDLRYHESFYVIPIERLQQTQNYLEILREQAAKLPSSIHLLSD CCCCHHHCCCCCCCCCCCCCEECCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AVFEKRVINKIESLLEGNSQ HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA