Click here to switch to the map view.

The map label for this gene is yqhM [H]

Identifier: 17229453

GI number: 17229453

Start: 2343117

End: 2343776

Strand: Direct

Name: yqhM [H]

Synonym: alr1961

Alternate gene names: 17229453

Gene position: 2343117-2343776 (Clockwise)

Preceding gene: 17229452

Following gene: 17229455

Centisome position: 36.53

GC content: 43.33

Gene sequence:

>660_bases
ATGGCAATTGACCGTTGGCTATTAACACAACACCAATCTGGTAAGTATCCTTCCACTCTACGATTTTACACTTGGTCGCC
ACCTGCCATTTCCCTTGGTTATCATCAACGCCAATATCCAGAACATTGGCAAAACCTGACTTGGCAAAATCAAAAATTAG
ATTTGGTGCGTCGTCCTACAGGTGGTAGGGCAGTACTTCACCAAGGTGATTTAACTTATGCTGTGGTAACATCGGGACTA
GGTGATAATCGCCTGGTGGCATACCAGAAGATTTGTGAGTTTTTAATTCAAGGATGGCGATCGCTCGGTTTTGCATTAAG
CTATGGTACAGCCGGACGTGGTTACATCCACAATCCCAACTGTTTTGGTACAGCTACAGGTGCAGATTTAGTCTTACCAA
CCGGAGCCAAACTCATAGGTAGCGCTCAATTGCGATGCGGTGGCGTAATCTTACAACATGGTTCTATCCGTCTCCAGCCA
GATACAGAACTATTTGCACAGGTATTCGGTGTAGAAGATTTTAACCCTGTAAAACTTAACCTGAGTGTAGATGATATTAT
TTCAGCTTTAATTACAGCTGCTAACAATTGTTTTGATATAGAACTGGAGACACAACCCCTATCCCCCTCTGAATGGGATG
AGATTCACATGACTAGTTAG

Upstream 100 bases:

>100_bases
AATCAGAATTTGGTGCAGCTTAAGCAATTTTAAATTTTCGATGGCTAGTAAGCAGGTTTGGCGACTAATTCCTTTATTAG
CAGCTCCCGGTAGCGTACAA

Downstream 100 bases:

>100_bases
TACAGCAAAGCGCCGATTCTTAATTTTGAATTTTGTTGGCGTTCGCGGTAGCGTCTCGTAGAGAAGCCTTCCCGTAGGGT
ATTTTGAATTTTGAATTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MAIDRWLLTQHQSGKYPSTLRFYTWSPPAISLGYHQRQYPEHWQNLTWQNQKLDLVRRPTGGRAVLHQGDLTYAVVTSGL
GDNRLVAYQKICEFLIQGWRSLGFALSYGTAGRGYIHNPNCFGTATGADLVLPTGAKLIGSAQLRCGGVILQHGSIRLQP
DTELFAQVFGVEDFNPVKLNLSVDDIISALITAANNCFDIELETQPLSPSEWDEIHMTS

Sequences:

>Translated_219_residues
MAIDRWLLTQHQSGKYPSTLRFYTWSPPAISLGYHQRQYPEHWQNLTWQNQKLDLVRRPTGGRAVLHQGDLTYAVVTSGL
GDNRLVAYQKICEFLIQGWRSLGFALSYGTAGRGYIHNPNCFGTATGADLVLPTGAKLIGSAQLRCGGVILQHGSIRLQP
DTELFAQVFGVEDFNPVKLNLSVDDIISALITAANNCFDIELETQPLSPSEWDEIHMTS
>Mature_218_residues
AIDRWLLTQHQSGKYPSTLRFYTWSPPAISLGYHQRQYPEHWQNLTWQNQKLDLVRRPTGGRAVLHQGDLTYAVVTSGLG
DNRLVAYQKICEFLIQGWRSLGFALSYGTAGRGYIHNPNCFGTATGADLVLPTGAKLIGSAQLRCGGVILQHGSIRLQPD
TELFAQVFGVEDFNPVKLNLSVDDIISALITAANNCFDIELETQPLSPSEWDEIHMTS

Specific function: Unknown

COG id: COG0095

COG function: function code H; Lipoate-protein ligase A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004143 [H]

Pfam domain/function: PF03099 BPL_LipA_LipB [H]

EC number: NA

Molecular weight: Translated: 24375; Mature: 24244

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIDRWLLTQHQSGKYPSTLRFYTWSPPAISLGYHQRQYPEHWQNLTWQNQKLDLVRRPT
CCCCHHEHCCCCCCCCCCEEEEEEECCCEEECCCCHHCCCHHHHCCCCCCCCEEEEECCC
GGRAVLHQGDLTYAVVTSGLGDNRLVAYQKICEFLIQGWRSLGFALSYGTAGRGYIHNPN
CCEEEEEECCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHCEEEECCCCCCCEEECCC
CFGTATGADLVLPTGAKLIGSAQLRCGGVILQHGSIRLQPDTELFAQVFGVEDFNPVKLN
CCEECCCCCEEECCCCHHHCCCCEEECEEEEECCEEEECCCHHHHHHHHCCCCCCCEEEE
LSVDDIISALITAANNCFDIELETQPLSPSEWDEIHMTS
ECHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEECC
>Mature Secondary Structure 
AIDRWLLTQHQSGKYPSTLRFYTWSPPAISLGYHQRQYPEHWQNLTWQNQKLDLVRRPT
CCCHHEHCCCCCCCCCCEEEEEEECCCEEECCCCHHCCCHHHHCCCCCCCCEEEEECCC
GGRAVLHQGDLTYAVVTSGLGDNRLVAYQKICEFLIQGWRSLGFALSYGTAGRGYIHNPN
CCEEEEEECCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHCEEEECCCCCCCEEECCC
CFGTATGADLVLPTGAKLIGSAQLRCGGVILQHGSIRLQPDTELFAQVFGVEDFNPVKLN
CCEECCCCCEEECCCCHHHCCCCEEECEEEEECCEEEECCCHHHHHHHHCCCCCCCEEEE
LSVDDIISALITAANNCFDIELETQPLSPSEWDEIHMTS
ECHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]