| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is ybeZ [C]
Identifier: 17229448
GI number: 17229448
Start: 2338809
End: 2339762
Strand: Direct
Name: ybeZ [C]
Synonym: alr1956
Alternate gene names: 17229448
Gene position: 2338809-2339762 (Clockwise)
Preceding gene: 17229447
Following gene: 17229449
Centisome position: 36.47
GC content: 45.7
Gene sequence:
>954_bases ATGGCAGATGCTTTCATAATTCAGCTGCCTAACATTCCCAGTGCGATCGCTCTTGCAGGTGATAGAGAAGAAAATTTCAA AATTCTCTCCCAGCAAACAGGAGCCACCTTAGTACTGCGTGGGCAAGAGTTACATATCTATGGTACAGAAACGCAAAGAG ATTTAGCGACAAAATTAGTGCGATCGCTAGAAAGTATCTGGATTCAGGGCAACACTATCTCCAGTGCTGATATATTAACA GCTCGTCAAGCTGTAGATAATCACCGCGAATATGAACTACAAGAACTACAGCGAGATGTCCTAGCCAGAACCCGCCGGGG TGAAGAAGTCCGAGCTAAAACCTTCAGACAACGCCAATATATCGAAGCCATCCGCAAGCGTGACCTCACCTTCTGCATCG GCCCGGCGGGGACTGGTAAAACATATCTGGCCGTTGTCCTAGCCGTCCAAGCACTCCTCGCCAATCAGGTAGAAAAGCTG ATTTTGACACGTCCGGCGGTAGAAGCTGGTGAAAGACTGGGGTTTTTACCAGGGGATTTGCAGCAGAAAATTAATCCCTA TCTGCGTCCGCTTTACGATGCAATTTACGAATTCATCGACCAAGAGAAAGTCCCCAATTTGATAGAACGGGGAATTATTG AAGTCGCACCCCTCGCCTATATGCGGGGACGCACCCTCAACCATGCTTTTGTGATTGTTGATGAAGCCCAAAATACCACA CCCGCCCAAATGAAAATGGTTTTAACTCGTTTGGGTTTTCGTTCTCGCATGATAATTACAGGCGACATCACACAAACTGA TTTGCCAATAAATCAACAATCAGGTTTGACAGTGGCTTTACAAGTTCTTAAGCACGTTGAAGGTATTGCTGTTTGTGAAT TTACCCAAAAAGATGTTGTGCGTCATCCTCTAGTTCAGCGCATTGTCAGCGCCTATGAACAGTATGAAAAATAG
Upstream 100 bases:
>100_bases TAAAATGAGATAAAAAAGCCATTAAAGCAAATCAAAAACAACTCACAACTGACACGCAAAGCGAGTCAAAATTGCTTCTT AATATATTACAAAAATACTT
Downstream 100 bases:
>100_bases TCAATAGTCAATAATCATTACTAAGGAATGGTAACGGGTATGAGTCATAGTCTGAAAGATTTTTTGGAAGCTTGCGAAAC ATTGGGAACTCTGCGGTTAA
Product: phosphate starvation-inducible protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MADAFIIQLPNIPSAIALAGDREENFKILSQQTGATLVLRGQELHIYGTETQRDLATKLVRSLESIWIQGNTISSADILT ARQAVDNHREYELQELQRDVLARTRRGEEVRAKTFRQRQYIEAIRKRDLTFCIGPAGTGKTYLAVVLAVQALLANQVEKL ILTRPAVEAGERLGFLPGDLQQKINPYLRPLYDAIYEFIDQEKVPNLIERGIIEVAPLAYMRGRTLNHAFVIVDEAQNTT PAQMKMVLTRLGFRSRMIITGDITQTDLPINQQSGLTVALQVLKHVEGIAVCEFTQKDVVRHPLVQRIVSAYEQYEK
Sequences:
>Translated_317_residues MADAFIIQLPNIPSAIALAGDREENFKILSQQTGATLVLRGQELHIYGTETQRDLATKLVRSLESIWIQGNTISSADILT ARQAVDNHREYELQELQRDVLARTRRGEEVRAKTFRQRQYIEAIRKRDLTFCIGPAGTGKTYLAVVLAVQALLANQVEKL ILTRPAVEAGERLGFLPGDLQQKINPYLRPLYDAIYEFIDQEKVPNLIERGIIEVAPLAYMRGRTLNHAFVIVDEAQNTT PAQMKMVLTRLGFRSRMIITGDITQTDLPINQQSGLTVALQVLKHVEGIAVCEFTQKDVVRHPLVQRIVSAYEQYEK >Mature_316_residues ADAFIIQLPNIPSAIALAGDREENFKILSQQTGATLVLRGQELHIYGTETQRDLATKLVRSLESIWIQGNTISSADILTA RQAVDNHREYELQELQRDVLARTRRGEEVRAKTFRQRQYIEAIRKRDLTFCIGPAGTGKTYLAVVLAVQALLANQVEKLI LTRPAVEAGERLGFLPGDLQQKINPYLRPLYDAIYEFIDQEKVPNLIERGIIEVAPLAYMRGRTLNHAFVIVDEAQNTTP AQMKMVLTRLGFRSRMIITGDITQTDLPINQQSGLTVALQVLKHVEGIAVCEFTQKDVVRHPLVQRIVSAYEQYEK
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=309, Percent_Identity=49.1909385113269, Blast_Score=263, Evalue=1e-71, Organism=Escherichia coli, GI1787257, Length=211, Percent_Identity=44.0758293838863, Blast_Score=183, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 35791; Mature: 35660
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADAFIIQLPNIPSAIALAGDREENFKILSQQTGATLVLRGQELHIYGTETQRDLATKLV CCCEEEEECCCCCCHHEECCCCCCCHHHHHCCCCCEEEEECCEEEEEECCHHHHHHHHHH RSLESIWIQGNTISSADILTARQAVDNHREYELQELQRDVLARTRRGEEVRAKTFRQRQY HHHHHHEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IEAIRKRDLTFCIGPAGTGKTYLAVVLAVQALLANQVEKLILTRPAVEAGERLGFLPGDL HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHH QQKINPYLRPLYDAIYEFIDQEKVPNLIERGIIEVAPLAYMRGRTLNHAFVIVDEAQNTT HHHHCHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHCCCCCCEEEEEEECCCCCC PAQMKMVLTRLGFRSRMIITGDITQTDLPINQQSGLTVALQVLKHVEGIAVCEFTQKDVV HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCHHHHH RHPLVQRIVSAYEQYEK HHHHHHHHHHHHHHHCC >Mature Secondary Structure ADAFIIQLPNIPSAIALAGDREENFKILSQQTGATLVLRGQELHIYGTETQRDLATKLV CCEEEEECCCCCCHHEECCCCCCCHHHHHCCCCCEEEEECCEEEEEECCHHHHHHHHHH RSLESIWIQGNTISSADILTARQAVDNHREYELQELQRDVLARTRRGEEVRAKTFRQRQY HHHHHHEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH IEAIRKRDLTFCIGPAGTGKTYLAVVLAVQALLANQVEKLILTRPAVEAGERLGFLPGDL HHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHH QQKINPYLRPLYDAIYEFIDQEKVPNLIERGIIEVAPLAYMRGRTLNHAFVIVDEAQNTT HHHHCHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHCCCCCCEEEEEEECCCCCC PAQMKMVLTRLGFRSRMIITGDITQTDLPINQQSGLTVALQVLKHVEGIAVCEFTQKDVV HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCHHHHH RHPLVQRIVSAYEQYEK HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]