Click here to switch to the map view.

The map label for this gene is pqqL [C]

Identifier: 17229431

GI number: 17229431

Start: 2322703

End: 2324241

Strand: Reverse

Name: pqqL [C]

Synonym: all1939

Alternate gene names: 17229431

Gene position: 2324241-2322703 (Counterclockwise)

Preceding gene: 17229432

Following gene: 17229430

Centisome position: 36.24

GC content: 45.03

Gene sequence:

>1539_bases
ATGAGGAAAGCAGCAACAGATATGCACAGGCGTAAACAATTCAAAATTAGAAATCTAAAATTCAAAATGGCAAAAGGCAA
AAGGTTTATTGTGGCATTGGTGGCTATTTTTGCCTTTTTAGCTGTAACTTTTAACTTTTCGCTGACGGCGACAGCAGCAG
CCAAACACTACACAGAGTTGCAGTTTGCGCCCTTACCGGAGGTGAAGTTACCCAAGTACGAACGGTTTGTGTTGCAGAAT
GGCTTGGTTGTCTATCTCATGGAGGATAGGGAACTACCTTTAATTGGTGGTACCGCACTAGTCAGGACTGGGAGTCGTTG
GGAACCAGCAGATAAAGTGGGATTGGCTAGCTTTACCGGTGGCGTGATGCGGACTGGTGGAACTAAGCAGCATTCACCTG
ATGATTTGAATCAAATATTAGAACAACGTGCCGCATCTGTAGAAGTGAATATTGGTGAGGCGGCGGGTAGCGCTAGTTTT
GAGGCGCTGAGTGAAGATGTGGAAACAGTATTTGGGCTATTTGCTGAGGTGTTGCGATCGCCAGTGTTTGCTCAAGCTAA
ACTAGATTTGGCGAAAACTCAAGCTAAAGGTGGTATCGCTCGCCGCAATGATGATCCTGATGGTATTGCTTCTAGGGAAT
TTCGCAAGCTGATTTATGGCAAGGATAGTCCCTATGGTCGTATTACAGAGTATGCCACTATTAACGCGATCGCTCGTGAA
GATTTGGTACAGTTCCACCAAAAGTATTTCCACCCCAATAATATGATTTTGGGCATTGTGGGAGATTTTGATGCTAAAAA
AATGCGATCGCTCATTCAAGCTAAGTTGGGTAACTGGGCGCGTAACCCACAATTTACTAAACCAACTTTACCAAAAGTCT
CCCCAGCAAATACAGGTGGTGTGTTTTTCGTCAATCAGCCCCAACTTACCCAAAGTAGTATTTTAGTTGGGCATTTGGGG
GGTAAATTCGATAACCCCGACTATGCAGCATTGGATGTATTGAATGGGGTGTTAAATGGTTTTGGGGGACGTTTATTTAA
TGAAGTGCGATCGCGTCAAGGTTTAGCCTATTCTGTATATGGTTACTGGAGTCCCCGCTTTGACTATCCTGGGATGTTCA
TGGCTGGTGGACAAACCCGTTCCGATGCGACTGTGCAGTTCGTCAAAGCCTTACAAGCGGAAATAAAACGCATCCAAGCC
CAACCAGTAACAGCAGAAGAATTAGCCCGTGCTAAAGAGTCTACTCTCAATTCTTTTGTATTCAACTTCCAAGACCCCAG
CCAAACCCTATCCCGATTGATGCGCTATGAATATTACGGCTATCCGGCTGATTTTCTCTTCCGCTATCAAAAAGCCGTAG
CCGCCACCACCATAGCTGATGTGCAACGGGTAGCCAAGCAATACCTCAAACCAGATAATCTTGTAACTCTGGTGGTGGGT
AATCAAACCGCTATTCAACCACCGTTAACTCAATTAGCTGCTCAAGTCACACCAATTGATGTGACAATTCCTAGTCCACC
ACAACAAGCGCAGAATTAA

Upstream 100 bases:

>100_bases
CCTGCGGATATTCAGCGAGTGGCAAAAGCAACGTTTACGCCGGAAAATCGCACAATTGGCAAGTTGTTATCGAAAAAAGC
ATGAGTAATACACCGCAAAT

Downstream 100 bases:

>100_bases
TAGTTGAGATCATCAAATCGGATTCCTATAAATGAGTGATAATCCCAGGTTCTCTAGAGAACCTGGGATTACTGTTTTGA
CGAAGACAAAGCAGCTTCAC

Product: processing proteinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MRKAATDMHRRKQFKIRNLKFKMAKGKRFIVALVAIFAFLAVTFNFSLTATAAAKHYTELQFAPLPEVKLPKYERFVLQN
GLVVYLMEDRELPLIGGTALVRTGSRWEPADKVGLASFTGGVMRTGGTKQHSPDDLNQILEQRAASVEVNIGEAAGSASF
EALSEDVETVFGLFAEVLRSPVFAQAKLDLAKTQAKGGIARRNDDPDGIASREFRKLIYGKDSPYGRITEYATINAIARE
DLVQFHQKYFHPNNMILGIVGDFDAKKMRSLIQAKLGNWARNPQFTKPTLPKVSPANTGGVFFVNQPQLTQSSILVGHLG
GKFDNPDYAALDVLNGVLNGFGGRLFNEVRSRQGLAYSVYGYWSPRFDYPGMFMAGGQTRSDATVQFVKALQAEIKRIQA
QPVTAEELARAKESTLNSFVFNFQDPSQTLSRLMRYEYYGYPADFLFRYQKAVAATTIADVQRVAKQYLKPDNLVTLVVG
NQTAIQPPLTQLAAQVTPIDVTIPSPPQQAQN

Sequences:

>Translated_512_residues
MRKAATDMHRRKQFKIRNLKFKMAKGKRFIVALVAIFAFLAVTFNFSLTATAAAKHYTELQFAPLPEVKLPKYERFVLQN
GLVVYLMEDRELPLIGGTALVRTGSRWEPADKVGLASFTGGVMRTGGTKQHSPDDLNQILEQRAASVEVNIGEAAGSASF
EALSEDVETVFGLFAEVLRSPVFAQAKLDLAKTQAKGGIARRNDDPDGIASREFRKLIYGKDSPYGRITEYATINAIARE
DLVQFHQKYFHPNNMILGIVGDFDAKKMRSLIQAKLGNWARNPQFTKPTLPKVSPANTGGVFFVNQPQLTQSSILVGHLG
GKFDNPDYAALDVLNGVLNGFGGRLFNEVRSRQGLAYSVYGYWSPRFDYPGMFMAGGQTRSDATVQFVKALQAEIKRIQA
QPVTAEELARAKESTLNSFVFNFQDPSQTLSRLMRYEYYGYPADFLFRYQKAVAATTIADVQRVAKQYLKPDNLVTLVVG
NQTAIQPPLTQLAAQVTPIDVTIPSPPQQAQN
>Mature_512_residues
MRKAATDMHRRKQFKIRNLKFKMAKGKRFIVALVAIFAFLAVTFNFSLTATAAAKHYTELQFAPLPEVKLPKYERFVLQN
GLVVYLMEDRELPLIGGTALVRTGSRWEPADKVGLASFTGGVMRTGGTKQHSPDDLNQILEQRAASVEVNIGEAAGSASF
EALSEDVETVFGLFAEVLRSPVFAQAKLDLAKTQAKGGIARRNDDPDGIASREFRKLIYGKDSPYGRITEYATINAIARE
DLVQFHQKYFHPNNMILGIVGDFDAKKMRSLIQAKLGNWARNPQFTKPTLPKVSPANTGGVFFVNQPQLTQSSILVGHLG
GKFDNPDYAALDVLNGVLNGFGGRLFNEVRSRQGLAYSVYGYWSPRFDYPGMFMAGGQTRSDATVQFVKALQAEIKRIQA
QPVTAEELARAKESTLNSFVFNFQDPSQTLSRLMRYEYYGYPADFLFRYQKAVAATTIADVQRVAKQYLKPDNLVTLVVG
NQTAIQPPLTQLAAQVTPIDVTIPSPPQQAQN

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 56783; Mature: 56783

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKAATDMHRRKQFKIRNLKFKMAKGKRFIVALVAIFAFLAVTFNFSLTATAAAKHYTEL
CCCHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCE
QFAPLPEVKLPKYERFVLQNGLVVYLMEDRELPLIGGTALVRTGSRWEPADKVGLASFTG
EECCCCCCCCCHHHHHHHHCCEEEEEECCCCCCEECCHHEEECCCCCCCHHHCCHHHHCC
GVMRTGGTKQHSPDDLNQILEQRAASVEVNIGEAAGSASFEALSEDVETVFGLFAEVLRS
CCEECCCCCCCCHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PVFAQAKLDLAKTQAKGGIARRNDDPDGIASREFRKLIYGKDSPYGRITEYATINAIARE
CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
DLVQFHQKYFHPNNMILGIVGDFDAKKMRSLIQAKLGNWARNPQFTKPTLPKVSPANTGG
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
VFFVNQPQLTQSSILVGHLGGKFDNPDYAALDVLNGVLNGFGGRLFNEVRSRQGLAYSVY
EEEECCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
GYWSPRFDYPGMFMAGGQTRSDATVQFVKALQAEIKRIQAQPVTAEELARAKESTLNSFV
EEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHE
FNFQDPSQTLSRLMRYEYYGYPADFLFRYQKAVAATTIADVQRVAKQYLKPDNLVTLVVG
EECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
NQTAIQPPLTQLAAQVTPIDVTIPSPPQQAQN
CCCCCCCCHHHHHHHCCCEEEECCCCCHHCCC
>Mature Secondary Structure
MRKAATDMHRRKQFKIRNLKFKMAKGKRFIVALVAIFAFLAVTFNFSLTATAAAKHYTEL
CCCHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCE
QFAPLPEVKLPKYERFVLQNGLVVYLMEDRELPLIGGTALVRTGSRWEPADKVGLASFTG
EECCCCCCCCCHHHHHHHHCCEEEEEECCCCCCEECCHHEEECCCCCCCHHHCCHHHHCC
GVMRTGGTKQHSPDDLNQILEQRAASVEVNIGEAAGSASFEALSEDVETVFGLFAEVLRS
CCEECCCCCCCCHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PVFAQAKLDLAKTQAKGGIARRNDDPDGIASREFRKLIYGKDSPYGRITEYATINAIARE
CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
DLVQFHQKYFHPNNMILGIVGDFDAKKMRSLIQAKLGNWARNPQFTKPTLPKVSPANTGG
HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
VFFVNQPQLTQSSILVGHLGGKFDNPDYAALDVLNGVLNGFGGRLFNEVRSRQGLAYSVY
EEEECCCCCCHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
GYWSPRFDYPGMFMAGGQTRSDATVQFVKALQAEIKRIQAQPVTAEELARAKESTLNSFV
EEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHE
FNFQDPSQTLSRLMRYEYYGYPADFLFRYQKAVAATTIADVQRVAKQYLKPDNLVTLVVG
EECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
NQTAIQPPLTQLAAQVTPIDVTIPSPPQQAQN
CCCCCCCCHHHHHHHCCCEEEECCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]