Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17229430

Identifier: 17229430

GI number: 17229430

Start: 2322164

End: 2322421

Strand: Reverse

Name: 17229430

Synonym: asl1938

Alternate gene names: NA

Gene position: 2322421-2322164 (Counterclockwise)

Preceding gene: 17229431

Following gene: 17229429

Centisome position: 36.21

GC content: 40.31

Gene sequence:

>258_bases
ATGGTAAGAATAACAATTTCTGATCTTTCCCCCGATGATGAAGGAAAATCATTGAAAGACCTCACTACTTGGGAACTGAA
GTCTGTGTATGCAGGCTTGGAAAGAAGATATGGCGGTAGAAGAAATCGAGTTGCTGAACCGTCAGAAGAGTCAACACCAC
CCACATTGAATGATACTAATGGAACTCTTGATCGATGGATGGATTCACTAGAATTACAAATTCAAGACCTGCGACAACAG
CTTGGTATTAATTCATGA

Upstream 100 bases:

>100_bases
AGGACAAATCAAAATATAAGGCAGGACTTCCCATCTTTCCGATTAGGGAAAATCCCTGTAACGAGCTAACCGATATAATC
GTATTGAAAGAGGCAAGCAA

Downstream 100 bases:

>100_bases
TTGTTTGTTAATTACAACCTAATATTTATGATGTCGTGTATTTTGATATTAGTTTTTATCAAAATACACGATTTTTTATT
ACGCGAGTGCGTGTGATACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MVRITISDLSPDDEGKSLKDLTTWELKSVYAGLERRYGGRRNRVAEPSEESTPPTLNDTNGTLDRWMDSLELQIQDLRQQ
LGINS

Sequences:

>Translated_85_residues
MVRITISDLSPDDEGKSLKDLTTWELKSVYAGLERRYGGRRNRVAEPSEESTPPTLNDTNGTLDRWMDSLELQIQDLRQQ
LGINS
>Mature_85_residues
MVRITISDLSPDDEGKSLKDLTTWELKSVYAGLERRYGGRRNRVAEPSEESTPPTLNDTNGTLDRWMDSLELQIQDLRQQ
LGINS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9679; Mature: 9679

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRITISDLSPDDEGKSLKDLTTWELKSVYAGLERRYGGRRNRVAEPSEESTPPTLNDTN
CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GTLDRWMDSLELQIQDLRQQLGINS
CCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVRITISDLSPDDEGKSLKDLTTWELKSVYAGLERRYGGRRNRVAEPSEESTPPTLNDTN
CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
GTLDRWMDSLELQIQDLRQQLGINS
CCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA