| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229423
Identifier: 17229423
GI number: 17229423
Start: 2316967
End: 2318049
Strand: Reverse
Name: 17229423
Synonym: all1931
Alternate gene names: NA
Gene position: 2318049-2316967 (Counterclockwise)
Preceding gene: 17229424
Following gene: 17229422
Centisome position: 36.14
GC content: 40.26
Gene sequence:
>1083_bases ATGCAAATATTAGATTCTCTATCTGTACAATTGTCAGATATTCCAGAGTTATTGCAGATATCATTGCAAGACATGATTCA TAATATCGAAATACAGTCTCAGTATTGTATTAAGCATCCCAACTATAAACCCTTAGAATTACCTGAGTCTTCAGTCTCTC GGTTTCAAAAATTATCTTTGGATTTACAGAATAAGTATTTGAGTCAGCAACTGCGTAGTTTTCTCTACGGCATCTATTAC AATGGCTCGTTGAAAAGTGTTCTGGCCTCTGATGCAGAGATATCTAATTTAGCCGTCAATAAAAATCTAGAAAACAACAC ATTTTTAGGTGTAGACCTAGCTTTTTACGATCGCCTGCATGAACATAATAAAGGTACTGGCTACTGGAGTTATGGTTGGC AAGTTCTCAGGGAAGAATCAGATGGGACTTTGGCAGTCCATCGGGATGGTTTAACTCTCCACGTTCCGCCGGATGGTTTG CGAACTCAGATGATGGGTAACTCTGCTGCTATCCAATTGCCAAAAAATCTCGTCCAAAACGGATTTTATATGGCGGTGGC TAATGCAGGTGCAGCGCAACAATATCAAACTTTGGTACGTGTTTATTTCAACTTAACTCCAGATGGTGCAGTTGCAGTCA TGGATGCTTTGACTACACACCTCAACGCTATACCGATTGCTTTCACATTTAAAGCACTATACAACCCCTCTGATTATGTT CGCCATGACTCGGCAGTACTGTATTTTGATAAAAATGACTATGAAAAGGTTTACCCTGTTCTGAAGACGATATATGCAGA AAATCAAACGCATTTTCAGGCACAAGTACCCCTATTTACTAAGCTTATCGCACCAGGGTTAGCGATCGCCGAAGAACCAA ACCATAGATTTGCCGAACAGGAAAGCTTTGGTACACACCGTTGTCAAATAATTGCTAATGGTTTGCTGGAAGCTTGGCAA CAAGGTAATGATACGCCAGCAGGTAGAATGACTGCAATTTTACAACACTTCTCTTCACTCAACATCGAATTGCAGCGTCC CTACCTCAATGCTTATTCTGAAGATATCTATACACCTTTGTAG
Upstream 100 bases:
>100_bases CGGTAGAGGGAGATGGGAAAGCTAAAGTGACATCCGCCTCATCTCCTTCATCTTCCTCATCCCTTCATATCCTACTCATA TCATTTACTAACAAACCTCT
Downstream 100 bases:
>100_bases TTAAAACTTCATCTAAACGATGAAAGTTAAAGATGTATTGATATCTGTGTAAAGTTTGACTGTTGATAACCTCACAGTTA TTGGGAGCTATTCCGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MQILDSLSVQLSDIPELLQISLQDMIHNIEIQSQYCIKHPNYKPLELPESSVSRFQKLSLDLQNKYLSQQLRSFLYGIYY NGSLKSVLASDAEISNLAVNKNLENNTFLGVDLAFYDRLHEHNKGTGYWSYGWQVLREESDGTLAVHRDGLTLHVPPDGL RTQMMGNSAAIQLPKNLVQNGFYMAVANAGAAQQYQTLVRVYFNLTPDGAVAVMDALTTHLNAIPIAFTFKALYNPSDYV RHDSAVLYFDKNDYEKVYPVLKTIYAENQTHFQAQVPLFTKLIAPGLAIAEEPNHRFAEQESFGTHRCQIIANGLLEAWQ QGNDTPAGRMTAILQHFSSLNIELQRPYLNAYSEDIYTPL
Sequences:
>Translated_360_residues MQILDSLSVQLSDIPELLQISLQDMIHNIEIQSQYCIKHPNYKPLELPESSVSRFQKLSLDLQNKYLSQQLRSFLYGIYY NGSLKSVLASDAEISNLAVNKNLENNTFLGVDLAFYDRLHEHNKGTGYWSYGWQVLREESDGTLAVHRDGLTLHVPPDGL RTQMMGNSAAIQLPKNLVQNGFYMAVANAGAAQQYQTLVRVYFNLTPDGAVAVMDALTTHLNAIPIAFTFKALYNPSDYV RHDSAVLYFDKNDYEKVYPVLKTIYAENQTHFQAQVPLFTKLIAPGLAIAEEPNHRFAEQESFGTHRCQIIANGLLEAWQ QGNDTPAGRMTAILQHFSSLNIELQRPYLNAYSEDIYTPL >Mature_360_residues MQILDSLSVQLSDIPELLQISLQDMIHNIEIQSQYCIKHPNYKPLELPESSVSRFQKLSLDLQNKYLSQQLRSFLYGIYY NGSLKSVLASDAEISNLAVNKNLENNTFLGVDLAFYDRLHEHNKGTGYWSYGWQVLREESDGTLAVHRDGLTLHVPPDGL RTQMMGNSAAIQLPKNLVQNGFYMAVANAGAAQQYQTLVRVYFNLTPDGAVAVMDALTTHLNAIPIAFTFKALYNPSDYV RHDSAVLYFDKNDYEKVYPVLKTIYAENQTHFQAQVPLFTKLIAPGLAIAEEPNHRFAEQESFGTHRCQIIANGLLEAWQ QGNDTPAGRMTAILQHFSSLNIELQRPYLNAYSEDIYTPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40699; Mature: 40699
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQILDSLSVQLSDIPELLQISLQDMIHNIEIQSQYCIKHPNYKPLELPESSVSRFQKLSL CCCHHHHHHHHHCCHHHHHHHHHHHHHCCEECCEEEECCCCCCCCCCCHHHHHHHHHHHH DLQNKYLSQQLRSFLYGIYYNGSLKSVLASDAEISNLAVNKNLENNTFLGVDLAFYDRLH HHHHHHHHHHHHHHHHEEEECCCHHHHHHCCCHHHHEEECCCCCCCEEEEEHHHHHHHHH EHNKGTGYWSYGWQVLREESDGTLAVHRDGLTLHVPPDGLRTQMMGNSAAIQLPKNLVQN HCCCCCEEHHHCCEEEEECCCCEEEEEECCEEEEECCCCHHHHHCCCCHHEECCHHHHCC GFYMAVANAGAAQQYQTLVRVYFNLTPDGAVAVMDALTTHLNAIPIAFTFKALYNPSDYV CCEEEEECCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCEEEEHHHCCCHHHH RHDSAVLYFDKNDYEKVYPVLKTIYAENQTHFQAQVPLFTKLIAPGLAIAEEPNHRFAEQ CCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCEEECCCCCCHHHH ESFGTHRCQIIANGLLEAWQQGNDTPAGRMTAILQHFSSLNIELQRPYLNAYSEDIYTPL HCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCCCC >Mature Secondary Structure MQILDSLSVQLSDIPELLQISLQDMIHNIEIQSQYCIKHPNYKPLELPESSVSRFQKLSL CCCHHHHHHHHHCCHHHHHHHHHHHHHCCEECCEEEECCCCCCCCCCCHHHHHHHHHHHH DLQNKYLSQQLRSFLYGIYYNGSLKSVLASDAEISNLAVNKNLENNTFLGVDLAFYDRLH HHHHHHHHHHHHHHHHEEEECCCHHHHHHCCCHHHHEEECCCCCCCEEEEEHHHHHHHHH EHNKGTGYWSYGWQVLREESDGTLAVHRDGLTLHVPPDGLRTQMMGNSAAIQLPKNLVQN HCCCCCEEHHHCCEEEEECCCCEEEEEECCEEEEECCCCHHHHHCCCCHHEECCHHHHCC GFYMAVANAGAAQQYQTLVRVYFNLTPDGAVAVMDALTTHLNAIPIAFTFKALYNPSDYV CCEEEEECCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCEEEEHHHCCCHHHH RHDSAVLYFDKNDYEKVYPVLKTIYAENQTHFQAQVPLFTKLIAPGLAIAEEPNHRFAEQ CCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHCCCCEEECCCCCCHHHH ESFGTHRCQIIANGLLEAWQQGNDTPAGRMTAILQHFSSLNIELQRPYLNAYSEDIYTPL HCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA