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The map label for this gene is hlyD [H]

Identifier: 17229420

GI number: 17229420

Start: 2313735

End: 2315273

Strand: Direct

Name: hlyD [H]

Synonym: alr1928

Alternate gene names: 17229420

Gene position: 2313735-2315273 (Clockwise)

Preceding gene: 17229419

Following gene: 17229421

Centisome position: 36.07

GC content: 42.95

Gene sequence:

>1539_bases
ATGCCAAACCCATCTGTTAATTCATCATCTGTACTTGTGCAACCACAGACGGCTCAGGTGCAACGTGGTCATGATTTAGT
TGATTATCAGACACAGGCACTGACGCAGACAAATGATTGGTTTTACGGCACAGAAGAACTACTAGATGCGTTACCGCAGC
GCTGGACGCGCTCGATGCTGTATTTGCTCATCAGCTTTACCATCATTGTTTTGCCTTGGGCAATGTTTACTAAGGTTGAT
GAAACGGGAAGTGCTAGAGGGCGTTTGGAACCCCAAGGCGCAACTCAAAAATTAGGTGTTGCTGTTACTAGTAGTGTCAA
GGCTGTCAATGTGGCAGAAGGGGCGACTGTCAAGGCGGGACAAGTGCTATTGGAATTAGAGTCTGATGTGTTGCAATCCC
AGGTGGAACAAGCACAGACAAGGTTAGAAGAACTCATCAATCGCCAAGGACAGCAAGAGCTACTAAAAAACCAATTGATG
TTAACAATTAACATCCAACAGCAGCAAAACCAAGCCCAAGAATTAGAGAAAATGGCGCAAGTGCATCAGGCGCAGCAAAA
CCTGGATGCTAGGCAGAGTACATATAATTTACAGAAGTTAGAAAAATTAGCGCTAGTTGAACAGGCTAGACAGGATATCA
ATACTAGTCAACTAGGAAGAAAATTAGCCAATAGCCGTTTGCAAAGAGATATTAAAGAAGTTTTACGTTATCGCCGACTT
TTGAGACAAGGTGCGATCGCTCAAATTAAAGTAGTAGAACTAGAAAAGATAGCGGAAGACAGTCAACGTTCCCTATTGCA
AGCCAACTCTGATTTTACTCAAGCCCAGCTACGCTTACAAGAAAAAGAAAGCCATTATCAAACCACCGTCAGCCAAACCT
TAGCTGACATTGAACAAGCAAAACTCCGCCTCCAAGAACAGCAAAGCAGCTATCAAAGTCTTGTGCAGACAGGTAAGTTA
GCACTGTTAAGGAGTCAGGAACAACTCAAAGACTTACAAAACCAACTAACTACCCTACAATCAGAAATCATCCAAACCAA
GAGCCAGATTAACGCCTTCAAGATTCAGATTCAGCAACGAGTAGTGCGATCGCCTGTTGATGGTACGATTTTTGATCTAC
CAATCGATAAACCAGGCCCTGTAGTCGAAGCTGGACAGATAGTTGCTCAAATTGCGCCTAAGAATGCGGCAATCATTCTC
AGAAGTTCCATGCCTAGTCAACACAGTGGTTTCTTGAGAGTGGGAATGCCAGTAAAAATTAAATTTGATGCCTATCCTTT
CCAAGATTATGGAGTATTACCAGGACGTGTTAGCTGGATTTCTCCTGACTCGAAAATTCAAACTACTAGCCAAGGCAACG
TAGAAGTTTATGAAATGGATATTACTTTAGATCATCCCTATATTCAAGCTGGGAATAAACGTATTACCTTAACCCCTGGA
CAATCAGCCACCGCCGAAGTTATTATCCGCCAGCGTCGAGTCATTGACTTTATTTTAGACCCCTTCAAAAAGCTGCAAAA
AGGTGGTTTAGAGCTTTAG

Upstream 100 bases:

>100_bases
TAGTGAGTAATGAGGTAAGAGTCAACAGTCAACAGTCAACCATCAACAGTTCTCTTTCCGCCTACTTTTCCATATCCCAC
CACATCCCGTCAAATAATTT

Downstream 100 bases:

>100_bases
GAAACAAGGCAAAGACCGTGGCATATTAGTAGTGGACTGTCTAAACTAAAATAGTGCATTAAATTGAAAAAATTAAACAC
AGATGTAGCTTGCTTCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MPNPSVNSSSVLVQPQTAQVQRGHDLVDYQTQALTQTNDWFYGTEELLDALPQRWTRSMLYLLISFTIIVLPWAMFTKVD
ETGSARGRLEPQGATQKLGVAVTSSVKAVNVAEGATVKAGQVLLELESDVLQSQVEQAQTRLEELINRQGQQELLKNQLM
LTINIQQQQNQAQELEKMAQVHQAQQNLDARQSTYNLQKLEKLALVEQARQDINTSQLGRKLANSRLQRDIKEVLRYRRL
LRQGAIAQIKVVELEKIAEDSQRSLLQANSDFTQAQLRLQEKESHYQTTVSQTLADIEQAKLRLQEQQSSYQSLVQTGKL
ALLRSQEQLKDLQNQLTTLQSEIIQTKSQINAFKIQIQQRVVRSPVDGTIFDLPIDKPGPVVEAGQIVAQIAPKNAAIIL
RSSMPSQHSGFLRVGMPVKIKFDAYPFQDYGVLPGRVSWISPDSKIQTTSQGNVEVYEMDITLDHPYIQAGNKRITLTPG
QSATAEVIIRQRRVIDFILDPFKKLQKGGLEL

Sequences:

>Translated_512_residues
MPNPSVNSSSVLVQPQTAQVQRGHDLVDYQTQALTQTNDWFYGTEELLDALPQRWTRSMLYLLISFTIIVLPWAMFTKVD
ETGSARGRLEPQGATQKLGVAVTSSVKAVNVAEGATVKAGQVLLELESDVLQSQVEQAQTRLEELINRQGQQELLKNQLM
LTINIQQQQNQAQELEKMAQVHQAQQNLDARQSTYNLQKLEKLALVEQARQDINTSQLGRKLANSRLQRDIKEVLRYRRL
LRQGAIAQIKVVELEKIAEDSQRSLLQANSDFTQAQLRLQEKESHYQTTVSQTLADIEQAKLRLQEQQSSYQSLVQTGKL
ALLRSQEQLKDLQNQLTTLQSEIIQTKSQINAFKIQIQQRVVRSPVDGTIFDLPIDKPGPVVEAGQIVAQIAPKNAAIIL
RSSMPSQHSGFLRVGMPVKIKFDAYPFQDYGVLPGRVSWISPDSKIQTTSQGNVEVYEMDITLDHPYIQAGNKRITLTPG
QSATAEVIIRQRRVIDFILDPFKKLQKGGLEL
>Mature_511_residues
PNPSVNSSSVLVQPQTAQVQRGHDLVDYQTQALTQTNDWFYGTEELLDALPQRWTRSMLYLLISFTIIVLPWAMFTKVDE
TGSARGRLEPQGATQKLGVAVTSSVKAVNVAEGATVKAGQVLLELESDVLQSQVEQAQTRLEELINRQGQQELLKNQLML
TINIQQQQNQAQELEKMAQVHQAQQNLDARQSTYNLQKLEKLALVEQARQDINTSQLGRKLANSRLQRDIKEVLRYRRLL
RQGAIAQIKVVELEKIAEDSQRSLLQANSDFTQAQLRLQEKESHYQTTVSQTLADIEQAKLRLQEQQSSYQSLVQTGKLA
LLRSQEQLKDLQNQLTTLQSEIIQTKSQINAFKIQIQQRVVRSPVDGTIFDLPIDKPGPVVEAGQIVAQIAPKNAAIILR
SSMPSQHSGFLRVGMPVKIKFDAYPFQDYGVLPGRVSWISPDSKIQTTSQGNVEVYEMDITLDHPYIQAGNKRITLTPGQ
SATAEVIIRQRRVIDFILDPFKKLQKGGLEL

Specific function: Involved in the transport of hemolysin A [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003997
- InterPro:   IPR006143
- InterPro:   IPR006144
- InterPro:   IPR010129 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 57665; Mature: 57533

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNPSVNSSSVLVQPQTAQVQRGHDLVDYQTQALTQTNDWFYGTEELLDALPQRWTRSML
CCCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
YLLISFTIIVLPWAMFTKVDETGSARGRLEPQGATQKLGVAVTSSVKAVNVAEGATVKAG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEECCCCEEEECCCCEEHHH
QVLLELESDVLQSQVEQAQTRLEELINRQGQQELLKNQLMLTINIQQQQNQAQELEKMAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEEEEHHHHHHHHHHHHHHH
VHQAQQNLDARQSTYNLQKLEKLALVEQARQDINTSQLGRKLANSRLQRDIKEVLRYRRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LRQGAIAQIKVVELEKIAEDSQRSLLQANSDFTQAQLRLQEKESHYQTTVSQTLADIEQA
HHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLRLQEQQSSYQSLVQTGKLALLRSQEQLKDLQNQLTTLQSEIIQTKSQINAFKIQIQQR
HHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVRSPVDGTIFDLPIDKPGPVVEAGQIVAQIAPKNAAIILRSSMPSQHSGFLRVGMPVKI
HHCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCEEEE
KFDAYPFQDYGVLPGRVSWISPDSKIQTTSQGNVEVYEMDITLDHPYIQAGNKRITLTPG
EECCCCCCCCCCCCCCEEEECCCCCEEECCCCCEEEEEEEEEECCCCCCCCCEEEEECCC
QSATAEVIIRQRRVIDFILDPFKKLQKGGLEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PNPSVNSSSVLVQPQTAQVQRGHDLVDYQTQALTQTNDWFYGTEELLDALPQRWTRSML
CCCCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
YLLISFTIIVLPWAMFTKVDETGSARGRLEPQGATQKLGVAVTSSVKAVNVAEGATVKAG
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCEECCCCEEEECCCCEEHHH
QVLLELESDVLQSQVEQAQTRLEELINRQGQQELLKNQLMLTINIQQQQNQAQELEKMAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEEEEHHHHHHHHHHHHHHH
VHQAQQNLDARQSTYNLQKLEKLALVEQARQDINTSQLGRKLANSRLQRDIKEVLRYRRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LRQGAIAQIKVVELEKIAEDSQRSLLQANSDFTQAQLRLQEKESHYQTTVSQTLADIEQA
HHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLRLQEQQSSYQSLVQTGKLALLRSQEQLKDLQNQLTTLQSEIIQTKSQINAFKIQIQQR
HHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVRSPVDGTIFDLPIDKPGPVVEAGQIVAQIAPKNAAIILRSSMPSQHSGFLRVGMPVKI
HHCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEECCEEEE
KFDAYPFQDYGVLPGRVSWISPDSKIQTTSQGNVEVYEMDITLDHPYIQAGNKRITLTPG
EECCCCCCCCCCCCCCEEEECCCCCEEECCCCCEEEEEEEEEECCCCCCCCCEEEEECCC
QSATAEVIIRQRRVIDFILDPFKKLQKGGLEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3891743; 1495479 [H]