| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229398
Identifier: 17229398
GI number: 17229398
Start: 2281207
End: 2283624
Strand: Direct
Name: 17229398
Synonym: alr1906
Alternate gene names: NA
Gene position: 2281207-2283624 (Clockwise)
Preceding gene: 17229397
Following gene: 17229399
Centisome position: 35.57
GC content: 43.09
Gene sequence:
>2418_bases ATGACTCAAAACGGCAAAGGTAGTTCATGGCAATTGAACTTAGCAATTTCCCTAACATCTGCTGGTGTTATAGGCATAAG TATCGCTTCTTCTGTTGCTCAATGCGCCTTTGCTCAAAGTGTCATTATTCCTGATCAAACCTTAGGTAATGAAAGGTCTC AGGTGAGTGAAAACTACAATAATAATCCCACCGAAGCAGTTACAGGAGGATCGGTTCGGGGTAATAACCTATTTCATAGT TTCCAAGAATTTAACGTTAATGAAGGACGTTCAGCACTTTTCGTAGCTCCTAACAGTAGCATCCAGAACATTTTTGTCAG AGTTACAGGTAATAATCGCTCTGATATTTTCGGGAAGTTAGAGACTTCTGGTGTCAATGCCAATTTGTTTGTGATTAATC CCAATGGGATTTTTTTTGGGCCGAATGCCACACTGAATATAGGTGGTTCTTTCGTGGCGAGTACAGCTAGTGGAATTCAG TTTGGCGATCGCACCATTTTTAGCGCCACTTCTCCCCAACCTTTATTAACCATGAGTGTACCTATTGGACTGCAATTTGG CAGAACAGGGGGAGAGATAAATGTGCAAGGGGAATTAGCAGTTCCCACAGGCAAAACCCTGGCATTAGTAGGTGGAAATG TAACTCTAGATGGTGGTAATGTTAGCTTTCTCCGGCGTAGGACAATCAAGGCAGAAAGTGGCCAAATCGCTATGGGGGGA ATACTAGGAGTAGGTACAGTAGGAATAAATTTGAATGCTAATAACGACATCAACAACCAAATTTTAAGTTTTTCTGATGA CGCAGTATTAGCTGATGTATTCCTCAACAATCAATCTAGAGTAGATGTCAGTGGTCAAGGTGCTGGCTATATCGAGATTC AAGGTAAGCAAATTGGACTCTCTCGTGCATCGCAAGTGGTAGCAGACACAGAGGGTAGCCAAAGTAGTCGCGGAATTTTC ATCCAGGCAGAAAACTTAACCCTGGCAGACGGCTCACAGGTAACAGCATCCGTAACTGGTGCTGAGTCTACCGCTTCCGG GGGCAATGTCACAGTCAAGGCAACTGATTCGGTACGAGTGGCCGGAATAGTACCCAATGGCCTAGAAAATGCAGGTTTTA ATACTGGGCTGTTTACTCTAACTCTCGGTAAAGGCCCTGGAGGAAATTTGACGATTGAAGCGGGTAGGTTAATTGTTGAG GATGGAGGCAACATATCAGCTAGTACCAGAGGAAATGATATTCGGAGTGTTGGCGGCACAATCAAAATAACCGCATCAGA GTTCGTCAAAATAAGTGGGAATACGAAGGATTCTAGAGAACGTCCCAGTGGTGTGTTTGCTCAGACTTCCGGCGCTGGGA ATGCAGGCTCCTTAATAATTAATACTCCAGTTTTGTTTGTCCAAAATGGTGCAGTCATATCAGCTACAACTCTGGCAAAT AGTCAAGGTAATGGGGGAAATATTACAATAAAAGCCTCTGATTTTATAGAAATAAGCGGAAGTTCGCCAATTGGTCAATT CCCTAGTGGCTTGTTTGCTCGCAGTCGAGGTAGTGGCAATGCAGGTTCTATATTAATTACTACAGGTCAACTTAATGTGC GCGATCGCGCTACAGTTACAGTGGACGCATTGGGTACAGGGAATGCTGGCAGAATAGAAATTAATGCCCGCGAAATTCGC CTTGATGGTAAAGCAAATTTGAATGCTACAACTCGATCAGGTAATGGTGGTGATATCAATTTGCAAATAGATGACCAACT ACTTTTACGCCGTGCTAGTTTCATCTCTACTAGAGCAGGTACTACAAGCGGCAGTGGTAATGGCGGTAATATTCTTATTA ATATTCCCAATGGCTTTATCGTTGCCGTTCCTGGTGAAAATAGTGACATTACAGCTAATGCTTTTAAAGGCCAAGGTGGT AAAGTTAGCATCAATGCCTTTAGCGTTTTTGGCATAGAGTTTCGAGAAAAAGAGAATCCACTCACCAACGACATCACCGC TAGTTCTGAATTTGGGCTAAACGGTACAGTCGAAATCGATACCCCAGAAGTTCAACCCGACCAAGGACTAATTAATTTAC CAACACAACCTGTTGAATCCCGGCTAGCCCAAGTCTGTCAAGCGGTTGCAGGACAAAATCAAGACAGTTTTATCATCACC GGGCGTGGTGGTTTGCCAAACAACCCTAATGAACTCCTTTATTCTGATGCTGTTCTTACAGATTGGGTATCTGTAAGTAA TGTAGAAACAATCCCCAATTCTCCTATCAGCAAAAGCATCTCTACTCCAACCCAAACTAATATTGTAGAAGCTACGGGAT GGGTAATCAGCCCTCAAGGTGAAGTTGTCCTCACTGTGAATACACCCAACACAAAATCACCTAACTCTTGGCAAAAAACT AGTACTTGTAATTCTTAA
Upstream 100 bases:
>100_bases TTCTGTAATTTTTTTCCTTGCTCCCCCCTCCCCACTTTTGTGCCTCATCTCCCTGTCCCATTCCCTATTTTTCAGCTAGT AAAGACGCTAAATAACTGAA
Downstream 100 bases:
>100_bases TCTGTATGAGTCTACGGTTAGGCTTACGCCTACGTAATTAAGAAAATCGGATTCCAACTTGGTGAGTTGAGAGAATTGAT ATCAACTGACAAATGACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Filamentous Hemagglutinin Family Outer Membrane Protein; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Filamentous Haemagglutinin-Like Protein; Hemagglutination Activity Domain-Containing Protein; Filamentous Haemagglutinin-Like; Filamentous Haemagglutinin-Like Protein Protein; Heme Utilization/Adhesion Protein
Number of amino acids: Translated: 805; Mature: 804
Protein sequence:
>805_residues MTQNGKGSSWQLNLAISLTSAGVIGISIASSVAQCAFAQSVIIPDQTLGNERSQVSENYNNNPTEAVTGGSVRGNNLFHS FQEFNVNEGRSALFVAPNSSIQNIFVRVTGNNRSDIFGKLETSGVNANLFVINPNGIFFGPNATLNIGGSFVASTASGIQ FGDRTIFSATSPQPLLTMSVPIGLQFGRTGGEINVQGELAVPTGKTLALVGGNVTLDGGNVSFLRRRTIKAESGQIAMGG ILGVGTVGINLNANNDINNQILSFSDDAVLADVFLNNQSRVDVSGQGAGYIEIQGKQIGLSRASQVVADTEGSQSSRGIF IQAENLTLADGSQVTASVTGAESTASGGNVTVKATDSVRVAGIVPNGLENAGFNTGLFTLTLGKGPGGNLTIEAGRLIVE DGGNISASTRGNDIRSVGGTIKITASEFVKISGNTKDSRERPSGVFAQTSGAGNAGSLIINTPVLFVQNGAVISATTLAN SQGNGGNITIKASDFIEISGSSPIGQFPSGLFARSRGSGNAGSILITTGQLNVRDRATVTVDALGTGNAGRIEINAREIR LDGKANLNATTRSGNGGDINLQIDDQLLLRRASFISTRAGTTSGSGNGGNILINIPNGFIVAVPGENSDITANAFKGQGG KVSINAFSVFGIEFREKENPLTNDITASSEFGLNGTVEIDTPEVQPDQGLINLPTQPVESRLAQVCQAVAGQNQDSFIIT GRGGLPNNPNELLYSDAVLTDWVSVSNVETIPNSPISKSISTPTQTNIVEATGWVISPQGEVVLTVNTPNTKSPNSWQKT STCNS
Sequences:
>Translated_805_residues MTQNGKGSSWQLNLAISLTSAGVIGISIASSVAQCAFAQSVIIPDQTLGNERSQVSENYNNNPTEAVTGGSVRGNNLFHS FQEFNVNEGRSALFVAPNSSIQNIFVRVTGNNRSDIFGKLETSGVNANLFVINPNGIFFGPNATLNIGGSFVASTASGIQ FGDRTIFSATSPQPLLTMSVPIGLQFGRTGGEINVQGELAVPTGKTLALVGGNVTLDGGNVSFLRRRTIKAESGQIAMGG ILGVGTVGINLNANNDINNQILSFSDDAVLADVFLNNQSRVDVSGQGAGYIEIQGKQIGLSRASQVVADTEGSQSSRGIF IQAENLTLADGSQVTASVTGAESTASGGNVTVKATDSVRVAGIVPNGLENAGFNTGLFTLTLGKGPGGNLTIEAGRLIVE DGGNISASTRGNDIRSVGGTIKITASEFVKISGNTKDSRERPSGVFAQTSGAGNAGSLIINTPVLFVQNGAVISATTLAN SQGNGGNITIKASDFIEISGSSPIGQFPSGLFARSRGSGNAGSILITTGQLNVRDRATVTVDALGTGNAGRIEINAREIR LDGKANLNATTRSGNGGDINLQIDDQLLLRRASFISTRAGTTSGSGNGGNILINIPNGFIVAVPGENSDITANAFKGQGG KVSINAFSVFGIEFREKENPLTNDITASSEFGLNGTVEIDTPEVQPDQGLINLPTQPVESRLAQVCQAVAGQNQDSFIIT GRGGLPNNPNELLYSDAVLTDWVSVSNVETIPNSPISKSISTPTQTNIVEATGWVISPQGEVVLTVNTPNTKSPNSWQKT STCNS >Mature_804_residues TQNGKGSSWQLNLAISLTSAGVIGISIASSVAQCAFAQSVIIPDQTLGNERSQVSENYNNNPTEAVTGGSVRGNNLFHSF QEFNVNEGRSALFVAPNSSIQNIFVRVTGNNRSDIFGKLETSGVNANLFVINPNGIFFGPNATLNIGGSFVASTASGIQF GDRTIFSATSPQPLLTMSVPIGLQFGRTGGEINVQGELAVPTGKTLALVGGNVTLDGGNVSFLRRRTIKAESGQIAMGGI LGVGTVGINLNANNDINNQILSFSDDAVLADVFLNNQSRVDVSGQGAGYIEIQGKQIGLSRASQVVADTEGSQSSRGIFI QAENLTLADGSQVTASVTGAESTASGGNVTVKATDSVRVAGIVPNGLENAGFNTGLFTLTLGKGPGGNLTIEAGRLIVED GGNISASTRGNDIRSVGGTIKITASEFVKISGNTKDSRERPSGVFAQTSGAGNAGSLIINTPVLFVQNGAVISATTLANS QGNGGNITIKASDFIEISGSSPIGQFPSGLFARSRGSGNAGSILITTGQLNVRDRATVTVDALGTGNAGRIEINAREIRL DGKANLNATTRSGNGGDINLQIDDQLLLRRASFISTRAGTTSGSGNGGNILINIPNGFIVAVPGENSDITANAFKGQGGK VSINAFSVFGIEFREKENPLTNDITASSEFGLNGTVEIDTPEVQPDQGLINLPTQPVESRLAQVCQAVAGQNQDSFIITG RGGLPNNPNELLYSDAVLTDWVSVSNVETIPNSPISKSISTPTQTNIVEATGWVISPQGEVVLTVNTPNTKSPNSWQKTS TCNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83086; Mature: 82955
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQNGKGSSWQLNLAISLTSAGVIGISIASSVAQCAFAQSVIIPDQTLGNERSQVSENYN CCCCCCCCCEEEEEEEEEECCCEEEEHHHHHHHHHHHHCEEECCCHHCCCCHHHHHHCCC NNPTEAVTGGSVRGNNLFHSFQEFNVNEGRSALFVAPNSSIQNIFVRVTGNNRSDIFGKL CCCCCEEECCCEECCHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEE ETSGVNANLFVINPNGIFFGPNATLNIGGSFVASTASGIQFGDRTIFSATSPQPLLTMSV ECCCCCEEEEEECCCCEEECCCCEEEECCCEEECCCCCCEECCEEEEECCCCCCEEEEEE PIGLQFGRTGGEINVQGELAVPTGKTLALVGGNVTLDGGNVSFLRRRTIKAESGQIAMGG CCEEEECCCCCEEEEEEEEECCCCCEEEEECCEEEECCCCEEEEEEEEEECCCCCEEEEE ILGVGTVGINLNANNDINNQILSFSDDAVLADVFLNNQSRVDVSGQGAGYIEIQGKQIGL EEEEEEEEEEEECCCCCCCCEEEECCCEEEEEEEECCCCEEEECCCCCEEEEECCCEECC SRASQVVADTEGSQSSRGIFIQAENLTLADGSQVTASVTGAESTASGGNVTVKATDSVRV CHHHEEEECCCCCCCCCEEEEEECCEEEECCCEEEEEEECCCCCCCCCEEEEEECCCEEE AGIVPNGLENAGFNTGLFTLTLGKGPGGNLTIEAGRLIVEDGGNISASTRGNDIRSVGGT EEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEECEEEEECCCCEEECCCCCCHHHCCCE IKITASEFVKISGNTKDSRERPSGVFAQTSGAGNAGSLIINTPVLFVQNGAVISATTLAN EEEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEECCEEEEECCCEEEEEEEEC SQGNGGNITIKASDFIEISGSSPIGQFPSGLFARSRGSGNAGSILITTGQLNVRDRATVT CCCCCCEEEEEECCEEEECCCCCCCCCCCCCEEECCCCCCCCEEEEEECEEEECCCEEEE VDALGTGNAGRIEINAREIRLDGKANLNATTRSGNGGDINLQIDDQLLLRRASFISTRAG EEECCCCCCCEEEEEEEEEEECCCCCCEEEEECCCCCEEEEEECHHHHHHHHHHHEECCC TTSGSGNGGNILINIPNGFIVAVPGENSDITANAFKGQGGKVSINAFSVFGIEFREKENP CCCCCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEEEEEECCCCC LTNDITASSEFGLNGTVEIDTPEVQPDQGLINLPTQPVESRLAQVCQAVAGQNQDSFIIT CCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEE GRGGLPNNPNELLYSDAVLTDWVSVSNVETIPNSPISKSISTPTQTNIVEATGWVISPQG ECCCCCCCCHHEEEECCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCC EVVLTVNTPNTKSPNSWQKTSTCNS CEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQNGKGSSWQLNLAISLTSAGVIGISIASSVAQCAFAQSVIIPDQTLGNERSQVSENYN CCCCCCCCEEEEEEEEEECCCEEEEHHHHHHHHHHHHCEEECCCHHCCCCHHHHHHCCC NNPTEAVTGGSVRGNNLFHSFQEFNVNEGRSALFVAPNSSIQNIFVRVTGNNRSDIFGKL CCCCCEEECCCEECCHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEE ETSGVNANLFVINPNGIFFGPNATLNIGGSFVASTASGIQFGDRTIFSATSPQPLLTMSV ECCCCCEEEEEECCCCEEECCCCEEEECCCEEECCCCCCEECCEEEEECCCCCCEEEEEE PIGLQFGRTGGEINVQGELAVPTGKTLALVGGNVTLDGGNVSFLRRRTIKAESGQIAMGG CCEEEECCCCCEEEEEEEEECCCCCEEEEECCEEEECCCCEEEEEEEEEECCCCCEEEEE ILGVGTVGINLNANNDINNQILSFSDDAVLADVFLNNQSRVDVSGQGAGYIEIQGKQIGL EEEEEEEEEEEECCCCCCCCEEEECCCEEEEEEEECCCCEEEECCCCCEEEEECCCEECC SRASQVVADTEGSQSSRGIFIQAENLTLADGSQVTASVTGAESTASGGNVTVKATDSVRV CHHHEEEECCCCCCCCCEEEEEECCEEEECCCEEEEEEECCCCCCCCCEEEEEECCCEEE AGIVPNGLENAGFNTGLFTLTLGKGPGGNLTIEAGRLIVEDGGNISASTRGNDIRSVGGT EEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEECEEEEECCCCEEECCCCCCHHHCCCE IKITASEFVKISGNTKDSRERPSGVFAQTSGAGNAGSLIINTPVLFVQNGAVISATTLAN EEEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEECCEEEEECCCEEEEEEEEC SQGNGGNITIKASDFIEISGSSPIGQFPSGLFARSRGSGNAGSILITTGQLNVRDRATVT CCCCCCEEEEEECCEEEECCCCCCCCCCCCCEEECCCCCCCCEEEEEECEEEECCCEEEE VDALGTGNAGRIEINAREIRLDGKANLNATTRSGNGGDINLQIDDQLLLRRASFISTRAG EEECCCCCCCEEEEEEEEEEECCCCCCEEEEECCCCCEEEEEECHHHHHHHHHHHEECCC TTSGSGNGGNILINIPNGFIVAVPGENSDITANAFKGQGGKVSINAFSVFGIEFREKENP CCCCCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEEEEEEEEEEEECCCCC LTNDITASSEFGLNGTVEIDTPEVQPDQGLINLPTQPVESRLAQVCQAVAGQNQDSFIIT CCCCCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEE GRGGLPNNPNELLYSDAVLTDWVSVSNVETIPNSPISKSISTPTQTNIVEATGWVISPQG ECCCCCCCCHHEEEECCHHEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCEEECCCC EVVLTVNTPNTKSPNSWQKTSTCNS CEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA