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The map label for this gene is glgA

Identifier: 17229371

GI number: 17229371

Start: 2241717

End: 2243135

Strand: Direct

Name: glgA

Synonym: alr1879

Alternate gene names: 17229371

Gene position: 2241717-2243135 (Clockwise)

Preceding gene: 17229370

Following gene: 17229375

Centisome position: 34.95

GC content: 46.72

Gene sequence:

>1419_bases
ATGCGGATTCTATTTGTGGCAGCAGAAGCAGCACCCATTGCAAAAGTAGGAGGGATGGGTGATGTTGTCGGTGCATTACC
TAAGGTCTTGAGAAAAATGGGGCATGATGTACGTATCTTCTTGCCCTATTACGGCTTTTTGCCAGACAAAATGGAGATTC
CCAAAGATCCAATATGGAAGGGATACGCCATGTTTCAGGACTTTACAGTTCACGAAGCAGTTCTGCCTGGTACTGATGTT
CCCTTGTATTTATTTGGACATCCAGCCTTTACCCCCCGGCGGATTTATTCGGGAGATGATGAAGACTGGCGCTTCACCTT
GTTTTCCAATGGTGCGGCTGAGTTTTGCTGGAATTACTGGAAACCCGACATTATTCACTGTCATGATTGGCACACGGGCA
TGATTCCTGTGTGGATGAACCAATCACCAGATATCACCACAGTCTTCACTATCCACAATCTGGCTTACCAAGGGCCTTGG
CGTTGGTATTTAGATAAAATTACTTGGTGTCCTTGGTATATGCAGGGACACAACACAATGGCGGCGGCTGTCCAGTTTGC
GGACAGGGTAAATACAGTTTCTCCCACATACGCCGAGCAAATCAAGACCCCGGCTTACGGTGAGAAAATAGAAGGTTTGC
TGTCTTTCATCAGTGGTAAATTATCTGGGATTGTTAACGGTATAGATACGGAAGTTTACGACCCAGCTAATGATAAATAT
ATTGCTCAAACGTTCACTGCCGATACTTTAGATAAACGCAAAGCCAACAAAATTGCTTTACAAGAAGAAGTAGGATTAGA
AGTTAACAGCAATGCCTTTTTAATTGGCATGGTGACAAGGTTAGTCGAGCAGAAGGGCTTAGATTTAGTCATCCAAATGC
TCGATCGCTTTATGGCTTATACTGATGCTCAGTTCGTCTTGTTGGGAACAGGCGATCGCTACTACGAAACCCAAATGTGG
CAATTAGCATCCCGCTACCCCGGTCGTATGGCTACTTACCTCCTGTATAACGATGCCCTATCTCGCCGCATCTACGCTGG
TACTGATGCCTTTTTGATGCCCAGTCGCTTTGAACCATGCGGTATTAGTCAAATGATGGCTTTACGCTACGGTTCCATTC
CCATCGTCCGCCGCACTGGAGGCTTGGTTGACACCGTATCCCACCACGACCCCATCAACGAAGCAGGTACAGGCTACTGC
TTCGACCGCTACGAACCCCTCGACTTATTTACCTGCATGATTCGCGCCTGGGAAGGCTTCCGCTACAAACCACAATGGCA
AGAACTACAAAAACGCGGTATGAGTCAAGACTTCAGCTGGTACAAATCCGCTAAGGAATACGACAAACTCTATCGCTCAA
TGTACGGTTTGCCAGACCCAGAAGAGACACAGCCGGAGTTAATTCTGACAAATCAGTAG

Upstream 100 bases:

>100_bases
GTTTAGATAAGTAATCAGTAGTCAGTGAACAGTGAACAATTAAGAACTGATAACTGATACTGATAACTGTATAGGCAGAA
TCAGGGAAACAAAAAATACC

Downstream 100 bases:

>100_bases
TTTTGGGGGTGTGAGGGTGTGAGGGTGTGAGGGTGTAAGGGTGTAAGGGTGTGAGGGTGTGAGGGTGTGAAGGTTTTTAA
TCCCTAAACCCCTAAACCCC

Product: glycogen synthase

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase 1

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MRILFVAAEAAPIAKVGGMGDVVGALPKVLRKMGHDVRIFLPYYGFLPDKMEIPKDPIWKGYAMFQDFTVHEAVLPGTDV
PLYLFGHPAFTPRRIYSGDDEDWRFTLFSNGAAEFCWNYWKPDIIHCHDWHTGMIPVWMNQSPDITTVFTIHNLAYQGPW
RWYLDKITWCPWYMQGHNTMAAAVQFADRVNTVSPTYAEQIKTPAYGEKIEGLLSFISGKLSGIVNGIDTEVYDPANDKY
IAQTFTADTLDKRKANKIALQEEVGLEVNSNAFLIGMVTRLVEQKGLDLVIQMLDRFMAYTDAQFVLLGTGDRYYETQMW
QLASRYPGRMATYLLYNDALSRRIYAGTDAFLMPSRFEPCGISQMMALRYGSIPIVRRTGGLVDTVSHHDPINEAGTGYC
FDRYEPLDLFTCMIRAWEGFRYKPQWQELQKRGMSQDFSWYKSAKEYDKLYRSMYGLPDPEETQPELILTNQ

Sequences:

>Translated_472_residues
MRILFVAAEAAPIAKVGGMGDVVGALPKVLRKMGHDVRIFLPYYGFLPDKMEIPKDPIWKGYAMFQDFTVHEAVLPGTDV
PLYLFGHPAFTPRRIYSGDDEDWRFTLFSNGAAEFCWNYWKPDIIHCHDWHTGMIPVWMNQSPDITTVFTIHNLAYQGPW
RWYLDKITWCPWYMQGHNTMAAAVQFADRVNTVSPTYAEQIKTPAYGEKIEGLLSFISGKLSGIVNGIDTEVYDPANDKY
IAQTFTADTLDKRKANKIALQEEVGLEVNSNAFLIGMVTRLVEQKGLDLVIQMLDRFMAYTDAQFVLLGTGDRYYETQMW
QLASRYPGRMATYLLYNDALSRRIYAGTDAFLMPSRFEPCGISQMMALRYGSIPIVRRTGGLVDTVSHHDPINEAGTGYC
FDRYEPLDLFTCMIRAWEGFRYKPQWQELQKRGMSQDFSWYKSAKEYDKLYRSMYGLPDPEETQPELILTNQ
>Mature_472_residues
MRILFVAAEAAPIAKVGGMGDVVGALPKVLRKMGHDVRIFLPYYGFLPDKMEIPKDPIWKGYAMFQDFTVHEAVLPGTDV
PLYLFGHPAFTPRRIYSGDDEDWRFTLFSNGAAEFCWNYWKPDIIHCHDWHTGMIPVWMNQSPDITTVFTIHNLAYQGPW
RWYLDKITWCPWYMQGHNTMAAAVQFADRVNTVSPTYAEQIKTPAYGEKIEGLLSFISGKLSGIVNGIDTEVYDPANDKY
IAQTFTADTLDKRKANKIALQEEVGLEVNSNAFLIGMVTRLVEQKGLDLVIQMLDRFMAYTDAQFVLLGTGDRYYETQMW
QLASRYPGRMATYLLYNDALSRRIYAGTDAFLMPSRFEPCGISQMMALRYGSIPIVRRTGGLVDTVSHHDPINEAGTGYC
FDRYEPLDLFTCMIRAWEGFRYKPQWQELQKRGMSQDFSWYKSAKEYDKLYRSMYGLPDPEETQPELILTNQ

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=479, Percent_Identity=35.2818371607516, Blast_Score=283, Evalue=1e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA1_NOSS1 (Q8YVU5)

Other databases:

- EMBL:   BA000019
- PIR:   AI2040
- RefSeq:   NP_485919.1
- ProteinModelPortal:   Q8YVU5
- STRING:   Q8YVU5
- GeneID:   1105471
- GenomeReviews:   BA000019_GR
- KEGG:   ana:alr1879
- NMPDR:   fig|103690.1.peg.2186
- eggNOG:   COG0297
- HOGENOM:   HBG596384
- OMA:   IYLVGHP
- PhylomeDB:   Q8YVU5
- ProtClustDB:   PRK00654
- BioCyc:   NSP103690:ALR1879-MONOMER
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 54253; Mature: 54253

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: BINDING 15-15

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILFVAAEAAPIAKVGGMGDVVGALPKVLRKMGHDVRIFLPYYGFLPDKMEIPKDPIWK
CEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC
GYAMFQDFTVHEAVLPGTDVPLYLFGHPAFTPRRIYSGDDEDWRFTLFSNGAAEFCWNYW
CHHHHHCCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCC
KPDIIHCHDWHTGMIPVWMNQSPDITTVFTIHNLAYQGPWRWYLDKITWCPWYMQGHNTM
CCCEEEEECCCCCCEEEEECCCCCEEEEEEEECHHCCCCHHHHHHCEEECCEEEECCCHH
AAAVQFADRVNTVSPTYAEQIKTPAYGEKIEGLLSFISGKLSGIVNGIDTEVYDPANDKY
HHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
IAQTFTADTLDKRKANKIALQEEVGLEVNSNAFLIGMVTRLVEQKGLDLVIQMLDRFMAY
EEEECCHHHHHHHHHHHEEEHHHCCCEECCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHH
TDAQFVLLGTGDRYYETQMWQLASRYPGRMATYLLYNDALSRRIYAGTDAFLMPSRFEPC
CCCEEEEEECCCCHHHHHHHHHHHHCCCHHEEHEEEHHHHHCEEECCCCCEECCCCCCCC
GISQMMALRYGSIPIVRRTGGLVDTVSHHDPINEAGTGYCFDRYEPLDLFTCMIRAWEGF
CHHHHHHHHCCCCEEEECCCCCEECCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCC
RYKPQWQELQKRGMSQDFSWYKSAKEYDKLYRSMYGLPDPEETQPELILTNQ
CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MRILFVAAEAAPIAKVGGMGDVVGALPKVLRKMGHDVRIFLPYYGFLPDKMEIPKDPIWK
CEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC
GYAMFQDFTVHEAVLPGTDVPLYLFGHPAFTPRRIYSGDDEDWRFTLFSNGAAEFCWNYW
CHHHHHCCCHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCC
KPDIIHCHDWHTGMIPVWMNQSPDITTVFTIHNLAYQGPWRWYLDKITWCPWYMQGHNTM
CCCEEEEECCCCCCEEEEECCCCCEEEEEEEECHHCCCCHHHHHHCEEECCEEEECCCHH
AAAVQFADRVNTVSPTYAEQIKTPAYGEKIEGLLSFISGKLSGIVNGIDTEVYDPANDKY
HHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
IAQTFTADTLDKRKANKIALQEEVGLEVNSNAFLIGMVTRLVEQKGLDLVIQMLDRFMAY
EEEECCHHHHHHHHHHHEEEHHHCCCEECCCEEHHHHHHHHHHHCCHHHHHHHHHHHHHH
TDAQFVLLGTGDRYYETQMWQLASRYPGRMATYLLYNDALSRRIYAGTDAFLMPSRFEPC
CCCEEEEEECCCCHHHHHHHHHHHHCCCHHEEHEEEHHHHHCEEECCCCCEECCCCCCCC
GISQMMALRYGSIPIVRRTGGLVDTVSHHDPINEAGTGYCFDRYEPLDLFTCMIRAWEGF
CHHHHHHHHCCCCEEEECCCCCEECCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHCCC
RYKPQWQELQKRGMSQDFSWYKSAKEYDKLYRSMYGLPDPEETQPELILTNQ
CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840