| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229363
Identifier: 17229363
GI number: 17229363
Start: 2233585
End: 2233935
Strand: Reverse
Name: 17229363
Synonym: all1871
Alternate gene names: NA
Gene position: 2233935-2233585 (Counterclockwise)
Preceding gene: 17229364
Following gene: 17229358
Centisome position: 34.83
GC content: 47.01
Gene sequence:
>351_bases ATGTCTCACTTTAGCACTCTCCGCACCAAAATCACCGATGCCGAAATCCTCAAAGCTTCCTTGCGCGACCTGGGCATCAG CGTAAAGACTGAAGCTGATGTTCGTGGTTACAATGGTCAGCGCCTTCGCTCCGACATCGTTGCAGTTTTGGACGGCGAAT ATGATCTAGGTTGGTCTCGCAACAGCGATGGTTCTTTTGACCTAATCGCTGACCTGTGGGGCGTTGCTAAAAAGCACAAC CAAACCGAGTTGATCAACTCCATCAACCAAAAATATGCTGTTAACAAAACCTTGGCTGAAGTAAAACAGCGCGGTTTACA AAACGCCAATGTGAAGTTGGTATTGCAATAA
Upstream 100 bases:
>100_bases GCTAGCAGTTACGAGAAAAAAGCCGCTCCCACATTATGCGCGGCTTCCCTGAAAACAAACGTTGTCCTTTTTCTCAATCT TCTCATTGGAGGAAACCCAA
Downstream 100 bases:
>100_bases CAATTTCTCTGCGCGTTCCCAAAGCTGCACGGGTTAACCACATCATAGCGGTTAGCCCGCTTTTTTTATGCCTTTTCTAC TCCAGTAAATTCCAAAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSHFSTLRTKITDAEILKASLRDLGISVKTEADVRGYNGQRLRSDIVAVLDGEYDLGWSRNSDGSFDLIADLWGVAKKHN QTELINSINQKYAVNKTLAEVKQRGLQNANVKLVLQ
Sequences:
>Translated_116_residues MSHFSTLRTKITDAEILKASLRDLGISVKTEADVRGYNGQRLRSDIVAVLDGEYDLGWSRNSDGSFDLIADLWGVAKKHN QTELINSINQKYAVNKTLAEVKQRGLQNANVKLVLQ >Mature_115_residues SHFSTLRTKITDAEILKASLRDLGISVKTEADVRGYNGQRLRSDIVAVLDGEYDLGWSRNSDGSFDLIADLWGVAKKHNQ TELINSINQKYAVNKTLAEVKQRGLQNANVKLVLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12945; Mature: 12814
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFSTLRTKITDAEILKASLRDLGISVKTEADVRGYNGQRLRSDIVAVLDGEYDLGWSR CCCHHHHHHHCCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC NSDGSFDLIADLWGVAKKHNQTELINSINQKYAVNKTLAEVKQRGLQNANVKLVLQ CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC >Mature Secondary Structure SHFSTLRTKITDAEILKASLRDLGISVKTEADVRGYNGQRLRSDIVAVLDGEYDLGWSR CCHHHHHHHCCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC NSDGSFDLIADLWGVAKKHNQTELINSINQKYAVNKTLAEVKQRGLQNANVKLVLQ CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA