| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229327
Identifier: 17229327
GI number: 17229327
Start: 2200898
End: 2201719
Strand: Reverse
Name: 17229327
Synonym: all1835
Alternate gene names: NA
Gene position: 2201719-2200898 (Counterclockwise)
Preceding gene: 17229329
Following gene: 17229323
Centisome position: 34.33
GC content: 44.65
Gene sequence:
>822_bases GTGAACGTGAACAATATTTTTATTCGTAAAGAATTTTTGTTGTTGCCAGGTTTAGCTGCTCTAGCAGTTTTTGGTAATAG TTTCTCTGCTCAGGCTCAAACAGTTATTCCTGCTGAGAGTCAACAGTTGACTGAATCATCTGCAACCGTGTCAGCAGACA CAGAGGCACAAAATCAAGATTCGGCGATCGCTTACCCTATATCTAATGCAACTGAAACACAGCAGTTTCCCAGTGTTAAT ACACAGGATACAGCTACTCGTATCATCACACCTGTTCCTGGGACAGTAGCTACTACATCAGCTACCCTAGCACCAGAATA TGTAGAACCTTCTGCTCAACCATCTGCTATACCATCATCTACATCCACAATTGCACAATCAGATATTGACCCAGGTAGAC CAACTCGTGGCGGTAGAAGCTACATTGGTGTTGCCGGTAATATTGGTATAAGTGGTGATGACTCATCTCTGAGTGATGGT AACTTCGCAGCCATTAGCAAAATCGGGTTGACGAATGCTATCTCCGTTAGACCATCAGCAGTGTTTGGAAGTAACACCAC AATTTTAGTTCCCATCACCTACGATTTTACCCTACAAGCCGCAGACGCTTTTAGTGAACCCCTAGCGATCGCACCTTACA TCGGTATTGGTGCAGCCATTAAAACTGGTGATGAATCCCAAGTAGGGTTTTTAGCCTCCGGTGGTATTGACTTGCCACTA AATGCTCAATTTACCGCCACAGCCGCCGTCAATGCTGGCTTCTTCGATAGCACTGATATCGGTCTACTCATAGGTGTCGG CTATAATTTCTCTGGCTTCTAG
Upstream 100 bases:
>100_bases GCCAATAGATTTTCTGGTGCTAGAGTTTTCTTATTACTAGAAATTCTCGGAATTTAGAGCAATTGCTAGAATTATCTATT GTGGAACCTATTTTTTAGGA
Downstream 100 bases:
>100_bases TTGAATAGGGGATTGGGGATAAAAAAGTAAAAAGTAAAAGATTTTTTCTTTTGACTTTTACCTTGGATGGGGGATTGGGA TTAATGTCCTCCAATCCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MNVNNIFIRKEFLLLPGLAALAVFGNSFSAQAQTVIPAESQQLTESSATVSADTEAQNQDSAIAYPISNATETQQFPSVN TQDTATRIITPVPGTVATTSATLAPEYVEPSAQPSAIPSSTSTIAQSDIDPGRPTRGGRSYIGVAGNIGISGDDSSLSDG NFAAISKIGLTNAISVRPSAVFGSNTTILVPITYDFTLQAADAFSEPLAIAPYIGIGAAIKTGDESQVGFLASGGIDLPL NAQFTATAAVNAGFFDSTDIGLLIGVGYNFSGF
Sequences:
>Translated_273_residues MNVNNIFIRKEFLLLPGLAALAVFGNSFSAQAQTVIPAESQQLTESSATVSADTEAQNQDSAIAYPISNATETQQFPSVN TQDTATRIITPVPGTVATTSATLAPEYVEPSAQPSAIPSSTSTIAQSDIDPGRPTRGGRSYIGVAGNIGISGDDSSLSDG NFAAISKIGLTNAISVRPSAVFGSNTTILVPITYDFTLQAADAFSEPLAIAPYIGIGAAIKTGDESQVGFLASGGIDLPL NAQFTATAAVNAGFFDSTDIGLLIGVGYNFSGF >Mature_273_residues MNVNNIFIRKEFLLLPGLAALAVFGNSFSAQAQTVIPAESQQLTESSATVSADTEAQNQDSAIAYPISNATETQQFPSVN TQDTATRIITPVPGTVATTSATLAPEYVEPSAQPSAIPSSTSTIAQSDIDPGRPTRGGRSYIGVAGNIGISGDDSSLSDG NFAAISKIGLTNAISVRPSAVFGSNTTILVPITYDFTLQAADAFSEPLAIAPYIGIGAAIKTGDESQVGFLASGGIDLPL NAQFTATAAVNAGFFDSTDIGLLIGVGYNFSGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27953; Mature: 27953
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVNNIFIRKEFLLLPGLAALAVFGNSFSAQAQTVIPAESQQLTESSATVSADTEAQNQD CCCCEEEEEEEEEHHCCHHHHHHHCCCCCCCEEEECCCCHHHHHCCCCEEEECCCCCCCC SAIAYPISNATETQQFPSVNTQDTATRIITPVPGTVATTSATLAPEYVEPSAQPSAIPSS CEEEEECCCCCCHHHCCCCCCCCCCEEEEECCCCCEEECCCCCCHHHCCCCCCCCCCCCC TSTIAQSDIDPGRPTRGGRSYIGVAGNIGISGDDSSLSDGNFAAISKIGLTNAISVRPSA CCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCE VFGSNTTILVPITYDFTLQAADAFSEPLAIAPYIGIGAAIKTGDESQVGFLASGGIDLPL EECCCCEEEEEEEEEEEEEEHHHCCCCEEECCCCCCCEEEECCCCCCEEEEECCCCCCCC NAQFTATAAVNAGFFDSTDIGLLIGVGYNFSGF CCCEEEEEEEECCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MNVNNIFIRKEFLLLPGLAALAVFGNSFSAQAQTVIPAESQQLTESSATVSADTEAQNQD CCCCEEEEEEEEEHHCCHHHHHHHCCCCCCCEEEECCCCHHHHHCCCCEEEECCCCCCCC SAIAYPISNATETQQFPSVNTQDTATRIITPVPGTVATTSATLAPEYVEPSAQPSAIPSS CEEEEECCCCCCHHHCCCCCCCCCCEEEEECCCCCEEECCCCCCHHHCCCCCCCCCCCCC TSTIAQSDIDPGRPTRGGRSYIGVAGNIGISGDDSSLSDGNFAAISKIGLTNAISVRPSA CCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCE VFGSNTTILVPITYDFTLQAADAFSEPLAIAPYIGIGAAIKTGDESQVGFLASGGIDLPL EECCCCEEEEEEEEEEEEEEHHHCCCCEEECCCCCCCEEEECCCCCCEEEEECCCCCCCC NAQFTATAAVNAGFFDSTDIGLLIGVGYNFSGF CCCEEEEEEEECCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA