| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229316
Identifier: 17229316
GI number: 17229316
Start: 2190767
End: 2190994
Strand: Reverse
Name: 17229316
Synonym: asl1824
Alternate gene names: NA
Gene position: 2190994-2190767 (Counterclockwise)
Preceding gene: 17229317
Following gene: 17229315
Centisome position: 34.16
GC content: 39.91
Gene sequence:
>228_bases ATGCCGAAATTACCAGGTTTAACTGGAAAAAAAGTTATTAATACCCTTGAGAAATTAGGATTTCAAGTGGTGCGTCAACG AGGTAGTCACGTACAAATGGAACATGATGACGGTCGTTTAGTCACTGTTCCTGTTCATGCTGGTAAAACAATAGGTAGAG GGTGGCTCAGTAAAATATTACGCGATGCTGAACTTACAAGAGAAGAGTTTATCGCATTGCTGGAATGA
Upstream 100 bases:
>100_bases AACTAATGATAAATATGAAAGAAGTAATCGAACTATGTTTAGAAACTGAAACTGATGAAAATAAACCAGAATTTATCGGT ATTCAAAAGGTAGTGATTTG
Downstream 100 bases:
>100_bases AAAATTAGGGAAAGTTTCCAGTCGCCAAATTCAAAATCTCAGATAGGATAATGGCAAAAGTTCGTTTAGAAGATATAAAG CGTCGGTTTAACAATGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: YcfA-Like
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MPKLPGLTGKKVINTLEKLGFQVVRQRGSHVQMEHDDGRLVTVPVHAGKTIGRGWLSKILRDAELTREEFIALLE
Sequences:
>Translated_75_residues MPKLPGLTGKKVINTLEKLGFQVVRQRGSHVQMEHDDGRLVTVPVHAGKTIGRGWLSKILRDAELTREEFIALLE >Mature_74_residues PKLPGLTGKKVINTLEKLGFQVVRQRGSHVQMEHDDGRLVTVPVHAGKTIGRGWLSKILRDAELTREEFIALLE
Specific function: Unknown
COG id: COG1724
COG function: function code N; Predicted periplasmic or secreted lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8416; Mature: 8285
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLPGLTGKKVINTLEKLGFQVVRQRGSHVQMEHDDGRLVTVPVHAGKTIGRGWLSKIL CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHH RDAELTREEFIALLE HHHHHHHHHHHHHCC >Mature Secondary Structure PKLPGLTGKKVINTLEKLGFQVVRQRGSHVQMEHDDGRLVTVPVHAGKTIGRGWLSKIL CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHH RDAELTREEFIALLE HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA