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The map label for this gene is 17229304

Identifier: 17229304

GI number: 17229304

Start: 2179610

End: 2179987

Strand: Reverse

Name: 17229304

Synonym: all1812

Alternate gene names: NA

Gene position: 2179987-2179610 (Counterclockwise)

Preceding gene: 17229305

Following gene: 17229303

Centisome position: 33.99

GC content: 44.18

Gene sequence:

>378_bases
ATGCAATTCATGGATGCTGAAGCAATCAAACGCCGTTATGCAGCAGGGGAAAGGTATTTTCCCGCCGCGAACCTAATTAG
AGCCAAGCTGATTGGAGTCTACTTACCTGGAATAAATTTATGGGGAGCAGACTTAAGCGGCGCTAACCTAGCGAAAGCCA
AACTCTGGGGAGCCGATTTGAGTCAAGCCAACTTAGCCAATGCTAATTTGACTAGAGCTAATTTGTGCGGCGTGAAGCTG
AATCAAGCAAATCTGCGGGGAGCTAAACTCAACTTGTCTAAGTTGTATGGAGCAGATTTAACTGGTGCTTATTATGACGA
AACTACGAAATTTTCTAGAGGTTTTGACCCGGTAAGTAGAAATATGCGGCAGTTTTAA

Upstream 100 bases:

>100_bases
AATGCTCGTTATTGGTATCAACGCAGCAGTCAGCCAGAGTTTGTTGGGGAGTTAAATCAGGAATGGGAACAGATAACTTC
TTTCTTACTCAAGAAGGTAA

Downstream 100 bases:

>100_bases
CAAAAGCTTTGCCTTTTGGAGTTTGCTATGGTACTGTTTTTACAAACATCTGCACCTTGAAAATTAAATAAGTACATATA
GCGTTTCTCGTTTGTCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MQFMDAEAIKRRYAAGERYFPAANLIRAKLIGVYLPGINLWGADLSGANLAKAKLWGADLSQANLANANLTRANLCGVKL
NQANLRGAKLNLSKLYGADLTGAYYDETTKFSRGFDPVSRNMRQF

Sequences:

>Translated_125_residues
MQFMDAEAIKRRYAAGERYFPAANLIRAKLIGVYLPGINLWGADLSGANLAKAKLWGADLSQANLANANLTRANLCGVKL
NQANLRGAKLNLSKLYGADLTGAYYDETTKFSRGFDPVSRNMRQF
>Mature_125_residues
MQFMDAEAIKRRYAAGERYFPAANLIRAKLIGVYLPGINLWGADLSGANLAKAKLWGADLSQANLANANLTRANLCGVKL
NQANLRGAKLNLSKLYGADLTGAYYDETTKFSRGFDPVSRNMRQF

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 13733; Mature: 13733

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFMDAEAIKRRYAAGERYFPAANLIRAKLIGVYLPGINLWGADLSGANLAKAKLWGADL
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCCCEEECCCCCCCCCCHHEECCCCC
SQANLANANLTRANLCGVKLNQANLRGAKLNLSKLYGADLTGAYYDETTKFSRGFDPVSR
CCCCCCCCCCCCCEECCEEECCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
NMRQF
HHHCC
>Mature Secondary Structure
MQFMDAEAIKRRYAAGERYFPAANLIRAKLIGVYLPGINLWGADLSGANLAKAKLWGADL
CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCCCEEECCCCCCCCCCHHEECCCCC
SQANLANANLTRANLCGVKLNQANLRGAKLNLSKLYGADLTGAYYDETTKFSRGFDPVSR
CCCCCCCCCCCCCEECCEEECCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHH
NMRQF
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]