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The map label for this gene is 17229284

Identifier: 17229284

GI number: 17229284

Start: 2155111

End: 2155830

Strand: Direct

Name: 17229284

Synonym: alr1792

Alternate gene names: NA

Gene position: 2155111-2155830 (Clockwise)

Preceding gene: 17229283

Following gene: 17229285

Centisome position: 33.6

GC content: 46.53

Gene sequence:

>720_bases
ATGCAAACATTTCCCGCTTATTCCTCAATGCAGCTGTCCTTATCACCAACTCAATGTCAGCCTTTGAAGATTATCGCACT
GGGGGATAGTTTAGTATATGGCTTTGGCGACCCAGATAAGGGGGGCTGGGTGGAGCAGTTGCGGCGCTGGTGGATGCTGC
CTGATAGCTCTGGTCATGTGCTGTACAATTTGGGAGTTAGAGGCGATCGCACTCAGCAAGTAGCACAAAGGTTAGAGGTA
GAATTTCGGCATCGTGGCGAATTGCGAAATCGTGTCCCTGACTTAATTATTCTCTCTGTCGGCGTTAACGATTCAGCGCG
GTTAACGCGTCTGAATGGACGTAACTGTACAGATTTTGCTTTATTTGAATCGGAAATCGCTTCCTTACTCGACCAAGCGC
AGCAGCTTTGTCCTGTGCTATTCGTGGGGATGGTTCCAGTAGATGAAGCCAAAATGCCTTTTTTAAATTGCTTTTATTTT
AATCATGCCGATCAATATCGCTACAAAGAAGCAACTCGCATTGCTTGCAATCAACGGCAAATTCCCTATTTAGATATTTT
CGACCAATGGATGGCACGGGGGGACGCTTGGCGCAACAAACGTTTAACTGAAGATGGTCTGCATCCCAATACCCTGGGTT
ATCAATCTCTATTGGAAGATGTGATTCACTGGGAACATTTAGCCGGCTATCATACCCGACCGGACTATCAGCTCAAGTGA

Upstream 100 bases:

>100_bases
ACCTCAATCAAGCTTTTGGGACAAAAGAAATAAAATATACCCCGTAATGGTGTAGAAATGTATAGAATCTTGTAAAGATA
TAAAATACAGTCTTTTTAAG

Downstream 100 bases:

>100_bases
TGGGATTGAGGAAATAACTAATGTCAATTTTCTCCAGATAAAAAATATTCGCCTATCATAGGGTGAGTTTTGGGAATCTT
GACATGACCAACAACCACCT

Product: hypothetical protein

Products: NA

Alternate protein names: GDSL Family Lipase; Arylesterase; GDSL-Like Lipase/Acylhydrolase; Lipolytic Protein G-D-S-L Family; Lysophospholipase L1 And Related Esterase; Lysophospholipase L1 And Related Esterases; Lipolytic G-D-S-L; Lipolytic Protein; GDSL-Like Lipase/Acylhydrolase Domain-Containing Protein; GDSL-Like Lipase/Esterase; SGNH Hydrolases Subfamily Lipase/Esterase

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MQTFPAYSSMQLSLSPTQCQPLKIIALGDSLVYGFGDPDKGGWVEQLRRWWMLPDSSGHVLYNLGVRGDRTQQVAQRLEV
EFRHRGELRNRVPDLIILSVGVNDSARLTRLNGRNCTDFALFESEIASLLDQAQQLCPVLFVGMVPVDEAKMPFLNCFYF
NHADQYRYKEATRIACNQRQIPYLDIFDQWMARGDAWRNKRLTEDGLHPNTLGYQSLLEDVIHWEHLAGYHTRPDYQLK

Sequences:

>Translated_239_residues
MQTFPAYSSMQLSLSPTQCQPLKIIALGDSLVYGFGDPDKGGWVEQLRRWWMLPDSSGHVLYNLGVRGDRTQQVAQRLEV
EFRHRGELRNRVPDLIILSVGVNDSARLTRLNGRNCTDFALFESEIASLLDQAQQLCPVLFVGMVPVDEAKMPFLNCFYF
NHADQYRYKEATRIACNQRQIPYLDIFDQWMARGDAWRNKRLTEDGLHPNTLGYQSLLEDVIHWEHLAGYHTRPDYQLK
>Mature_239_residues
MQTFPAYSSMQLSLSPTQCQPLKIIALGDSLVYGFGDPDKGGWVEQLRRWWMLPDSSGHVLYNLGVRGDRTQQVAQRLEV
EFRHRGELRNRVPDLIILSVGVNDSARLTRLNGRNCTDFALFESEIASLLDQAQQLCPVLFVGMVPVDEAKMPFLNCFYF
NHADQYRYKEATRIACNQRQIPYLDIFDQWMARGDAWRNKRLTEDGLHPNTLGYQSLLEDVIHWEHLAGYHTRPDYQLK

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27651; Mature: 27651

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTFPAYSSMQLSLSPTQCQPLKIIALGDSLVYGFGDPDKGGWVEQLRRWWMLPDSSGHV
CCCCCCCCCEEEEECCCCCCCEEEEEECCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCE
LYNLGVRGDRTQQVAQRLEVEFRHRGELRNRVPDLIILSVGVNDSARLTRLNGRNCTDFA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCHHH
LFESEIASLLDQAQQLCPVLFVGMVPVDEAKMPFLNCFYFNHADQYRYKEATRIACNQRQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCC
IPYLDIFDQWMARGDAWRNKRLTEDGLHPNTLGYQSLLEDVIHWEHLAGYHTRPDYQLK
CCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQTFPAYSSMQLSLSPTQCQPLKIIALGDSLVYGFGDPDKGGWVEQLRRWWMLPDSSGHV
CCCCCCCCCEEEEECCCCCCCEEEEEECCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCE
LYNLGVRGDRTQQVAQRLEVEFRHRGELRNRVPDLIILSVGVNDSARLTRLNGRNCTDFA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCHHH
LFESEIASLLDQAQQLCPVLFVGMVPVDEAKMPFLNCFYFNHADQYRYKEATRIACNQRQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCC
IPYLDIFDQWMARGDAWRNKRLTEDGLHPNTLGYQSLLEDVIHWEHLAGYHTRPDYQLK
CCHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA