| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229281
Identifier: 17229281
GI number: 17229281
Start: 2153364
End: 2153627
Strand: Reverse
Name: 17229281
Synonym: asl1789
Alternate gene names: NA
Gene position: 2153627-2153364 (Counterclockwise)
Preceding gene: 17229287
Following gene: 17229279
Centisome position: 33.58
GC content: 39.39
Gene sequence:
>264_bases ATGACTCTGATGAAAGAAAAAAATTTAGGTTGGGTTGAACAACGTGAAACCCAACAAAACCAAGGATTTTTCGTGTTGGG TTACTCTACGAGAAGGCTGCGCCTACGTCCCTTAATCCAACCTACTCCTAAATTTACCAAAGCCTTAAAAATCAAGGGGT CTGAATTTTTATTTAACGAGAGCCATAGAAGAGTGGTAGTTACTCAGGAGTCAATACTGAAATTGGTTAAACATTTTTGG TGTACTTCGTGGTGGGAGTTGTGA
Upstream 100 bases:
>100_bases GTAAATCGTTCAAGTTATTTTTACATGATGCCTAAATGAGTAATAAGCCGAGCCGGAGGCGGATAGTCTCCGGTGGGTGC AACTTGAGTAGTGCTATTTT
Downstream 100 bases:
>100_bases CCCCTCACCCCGTTTCCTGGTCTCACAACTTAAAATAAAAAAAACGACCACAGTGATTACCGTGATCGTAGACGAATTAA CTATACAGTACTGATTCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MTLMKEKNLGWVEQRETQQNQGFFVLGYSTRRLRLRPLIQPTPKFTKALKIKGSEFLFNESHRRVVVTQESILKLVKHFW CTSWWEL
Sequences:
>Translated_87_residues MTLMKEKNLGWVEQRETQQNQGFFVLGYSTRRLRLRPLIQPTPKFTKALKIKGSEFLFNESHRRVVVTQESILKLVKHFW CTSWWEL >Mature_86_residues TLMKEKNLGWVEQRETQQNQGFFVLGYSTRRLRLRPLIQPTPKFTKALKIKGSEFLFNESHRRVVVTQESILKLVKHFWC TSWWEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10495; Mature: 10364
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLMKEKNLGWVEQRETQQNQGFFVLGYSTRRLRLRPLIQPTPKFTKALKIKGSEFLFNE CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCEEEECCCCEEEECC SHRRVVVTQESILKLVKHFWCTSWWEL CCCEEEEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLMKEKNLGWVEQRETQQNQGFFVLGYSTRRLRLRPLIQPTPKFTKALKIKGSEFLFNE CCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCEEEECCCCEEEECC SHRRVVVTQESILKLVKHFWCTSWWEL CCCEEEEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA