| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229263
Identifier: 17229263
GI number: 17229263
Start: 2126051
End: 2126767
Strand: Reverse
Name: 17229263
Synonym: all1771
Alternate gene names: NA
Gene position: 2126767-2126051 (Counterclockwise)
Preceding gene: 17229264
Following gene: 17229262
Centisome position: 33.16
GC content: 43.79
Gene sequence:
>717_bases ATGATCAAACTTAAAAAACAGCAACAAAAAACTTCTTGTAGTGATTCCGGTTTTACCATCATTGAGTCTTTGGTAGCAAT CATCGTAGTAGCAATTTTGCTAACAGCGATCGCACCTGTACTAGTGATGTCAACAGCTACCCGTGTTCAGGCAAGACGTG TGGAACTAGCAACACAAGCTGCCAAATCCTTCATTGATGGTGTGAGAACTGGAGCGATCGCCGCACCAAGCCAAACCATT GAAGTTGCTGCTTCCAGCACATCTGATCCCAGACGGATTGCCGATGTTGCCGGTACACCACCGATCACGGGGAGACCAGA AGATTATTTAGTTAACGATTTAACTAAAATGGCACTCCCTTCATCGGCAAGTGGCTTGTACTGCTTTACAAGATCCGGCA ATATCACCACAACAGATTGTACGAACAAACCATTTGAATATTACATTCAGGCTGCCCGAATTACTGTTCCAGGAAGTTCA GCCAATGATGGCTATCGCTTGGCCATTCGAGTTTATAGGGCAGATGTTGATTTTACGAAAACTCGAACTGCTAGTACTGG TCAATCTAATAAGAAAACACAAAATTCATTTACTGGTAACTTAGGCGATCGGCAAGCACCACTACTCGAAATGACAACCG ACATTTCTAGCACTAGTACTTCCTTTAGGGCTTTATGTCAGCGTCTTGGAGTGGCGACGAATACAGCCTGTAATTAA
Upstream 100 bases:
>100_bases GTTGTGTGCCAAGAAAGCCGCAGACGATACAAATGCCATAGATGCAGATCAACGTGGTTCTTGCTCGTAAGAATCAAATT CTCAAAGTAGGTGATGAGCA
Downstream 100 bases:
>100_bases TGAGCAAAATCTCATGTGTATCTATCCATCAATATTCACTAAAGGGAAAACCAGAGTATGATGAGGGCATTAAAATTCCT GCTTCAAAACCAGTTGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MIKLKKQQQKTSCSDSGFTIIESLVAIIVVAILLTAIAPVLVMSTATRVQARRVELATQAAKSFIDGVRTGAIAAPSQTI EVAASSTSDPRRIADVAGTPPITGRPEDYLVNDLTKMALPSSASGLYCFTRSGNITTTDCTNKPFEYYIQAARITVPGSS ANDGYRLAIRVYRADVDFTKTRTASTGQSNKKTQNSFTGNLGDRQAPLLEMTTDISSTSTSFRALCQRLGVATNTACN
Sequences:
>Translated_238_residues MIKLKKQQQKTSCSDSGFTIIESLVAIIVVAILLTAIAPVLVMSTATRVQARRVELATQAAKSFIDGVRTGAIAAPSQTI EVAASSTSDPRRIADVAGTPPITGRPEDYLVNDLTKMALPSSASGLYCFTRSGNITTTDCTNKPFEYYIQAARITVPGSS ANDGYRLAIRVYRADVDFTKTRTASTGQSNKKTQNSFTGNLGDRQAPLLEMTTDISSTSTSFRALCQRLGVATNTACN >Mature_238_residues MIKLKKQQQKTSCSDSGFTIIESLVAIIVVAILLTAIAPVLVMSTATRVQARRVELATQAAKSFIDGVRTGAIAAPSQTI EVAASSTSDPRRIADVAGTPPITGRPEDYLVNDLTKMALPSSASGLYCFTRSGNITTTDCTNKPFEYYIQAARITVPGSS ANDGYRLAIRVYRADVDFTKTRTASTGQSNKKTQNSFTGNLGDRQAPLLEMTTDISSTSTSFRALCQRLGVATNTACN
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25401; Mature: 25401
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLKKQQQKTSCSDSGFTIIESLVAIIVVAILLTAIAPVLVMSTATRVQARRVELATQA CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKSFIDGVRTGAIAAPSQTIEVAASSTSDPRRIADVAGTPPITGRPEDYLVNDLTKMALP HHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC SSASGLYCFTRSGNITTTDCTNKPFEYYIQAARITVPGSSANDGYRLAIRVYRADVDFTK CCCCCEEEEECCCCEEECCCCCCCHHHEEEEEEEEECCCCCCCCEEEEEEEEECCCCHHH TRTASTGQSNKKTQNSFTGNLGDRQAPLLEMTTDISSTSTSFRALCQRLGVATNTACN CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIKLKKQQQKTSCSDSGFTIIESLVAIIVVAILLTAIAPVLVMSTATRVQARRVELATQA CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKSFIDGVRTGAIAAPSQTIEVAASSTSDPRRIADVAGTPPITGRPEDYLVNDLTKMALP HHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC SSASGLYCFTRSGNITTTDCTNKPFEYYIQAARITVPGSSANDGYRLAIRVYRADVDFTK CCCCCEEEEECCCCEEECCCCCCCHHHEEEEEEEEECCCCCCCCEEEEEEEEECCCCHHH TRTASTGQSNKKTQNSFTGNLGDRQAPLLEMTTDISSTSTSFRALCQRLGVATNTACN CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA