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The map label for this gene is yibD [H]

Identifier: 17229260

GI number: 17229260

Start: 2123029

End: 2123997

Strand: Reverse

Name: yibD [H]

Synonym: all1768

Alternate gene names: 17229260

Gene position: 2123997-2123029 (Counterclockwise)

Preceding gene: 17229261

Following gene: 17229259

Centisome position: 33.12

GC content: 38.6

Gene sequence:

>969_bases
ATGACTGCAAATCTTGATTTAACTATAGCTATACCGACTTACAATGGTGCGAATCGTTTGCCAGAATTATTAGAACGGCT
GCGAAACCAAATTAACACCGAAAATATTTCCTGGGAAATTATTGTTGTCGATAACAACAGCACTGACAATACAGCCCAAG
TTGTACAGCAGTACCAAGAAAATTGGCATTGCTCCTATCCTTTAAAATACTACTTTGAAGCTAAACAAGGTGCAGCCTAT
GCCAGAAAAAAAGGTGTAGAAGTTGCTTCAGGTAAATTAATCGGTTTTTTAGATGACGATAACTACCCCATCCCAACTTG
GGTAGCAGCCGCTTGTGCTTTTGCTCAAAAGTACCCCAAAGCAGGGGCTTATGGTAGCCAAATACACCCGGATTGGGAGG
TAGAACCACCAGAAAACTTTAAGAGTATTATTCCTTTTTTAGCAATTACAGAACGCGGTAATAAACCTCTATTTTACGAG
CCGAGAAAAAAACTTCTTCCCCCCTCTGCTGGACTGGTTGTCCGCCGGGAAGCATGGTTAGAGAGTGTACCAGAACAGCC
AATTTTAACTGGTAGAGTTGCAGGTAATATGCTGACTGGGGAAGATTTAGAAATGCTGTGTTACCTGCAAAAATCGGGTT
GGGAAGTTTGGTATAACCCAGAGATGGAAATATATCATAGAATACCAAGCTCTAGATTAAAAAAAGAATATTTAATTCCC
TTCTTTAGAGGGATTGGTTTGAGTCGGTATGTTACCAGGACAACAAATGTTCAAGGATATTACAAACCATTTGTCCTTGT
TGCATACATGATAAATGATACCAGAAAGATTATTTTACAACTACTTAAGTACGGAACCAAGATAAAAACTGATTTAGTCA
TAGCTTGTGAAACAGAACTGTTTTTCAGTAGCCTAATTAGTCCTTTCTATCTGTGGAAAAATGGGTACTTAACTAAAAGT
GGTAAGTAA

Upstream 100 bases:

>100_bases
CCATCAGTTGCAGTTCAGCCTAAAATAACCTCGGTTAAGTCTTTAACATCATCCAGACACACCCAACCAGAAACTACAAT
CTAAGTACAAACTGCAAAAA

Downstream 100 bases:

>100_bases
ATAATTGAGAAAGCTGGGATTATGCAACAAGAACTACAAGAGATAATTGAAACGGTTGATTTTACCGTAGCTATTCCCAC
ATGGAATGGTGCAGAACGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MTANLDLTIAIPTYNGANRLPELLERLRNQINTENISWEIIVVDNNSTDNTAQVVQQYQENWHCSYPLKYYFEAKQGAAY
ARKKGVEVASGKLIGFLDDDNYPIPTWVAAACAFAQKYPKAGAYGSQIHPDWEVEPPENFKSIIPFLAITERGNKPLFYE
PRKKLLPPSAGLVVRREAWLESVPEQPILTGRVAGNMLTGEDLEMLCYLQKSGWEVWYNPEMEIYHRIPSSRLKKEYLIP
FFRGIGLSRYVTRTTNVQGYYKPFVLVAYMINDTRKIILQLLKYGTKIKTDLVIACETELFFSSLISPFYLWKNGYLTKS
GK

Sequences:

>Translated_322_residues
MTANLDLTIAIPTYNGANRLPELLERLRNQINTENISWEIIVVDNNSTDNTAQVVQQYQENWHCSYPLKYYFEAKQGAAY
ARKKGVEVASGKLIGFLDDDNYPIPTWVAAACAFAQKYPKAGAYGSQIHPDWEVEPPENFKSIIPFLAITERGNKPLFYE
PRKKLLPPSAGLVVRREAWLESVPEQPILTGRVAGNMLTGEDLEMLCYLQKSGWEVWYNPEMEIYHRIPSSRLKKEYLIP
FFRGIGLSRYVTRTTNVQGYYKPFVLVAYMINDTRKIILQLLKYGTKIKTDLVIACETELFFSSLISPFYLWKNGYLTKS
GK
>Mature_321_residues
TANLDLTIAIPTYNGANRLPELLERLRNQINTENISWEIIVVDNNSTDNTAQVVQQYQENWHCSYPLKYYFEAKQGAAYA
RKKGVEVASGKLIGFLDDDNYPIPTWVAAACAFAQKYPKAGAYGSQIHPDWEVEPPENFKSIIPFLAITERGNKPLFYEP
RKKLLPPSAGLVVRREAWLESVPEQPILTGRVAGNMLTGEDLEMLCYLQKSGWEVWYNPEMEIYHRIPSSRLKKEYLIPF
FRGIGLSRYVTRTTNVQGYYKPFVLVAYMINDTRKIILQLLKYGTKIKTDLVIACETELFFSSLISPFYLWKNGYLTKSG
K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=145, Percent_Identity=32.4137931034483, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36964; Mature: 36833

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTANLDLTIAIPTYNGANRLPELLERLRNQINTENISWEIIVVDNNSTDNTAQVVQQYQE
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
NWHCSYPLKYYFEAKQGAAYARKKGVEVASGKLIGFLDDDNYPIPTWVAAACAFAQKYPK
CCCCCCCCEEEEECCCCHHHHHHCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHCCC
AGAYGSQIHPDWEVEPPENFKSIIPFLAITERGNKPLFYEPRKKLLPPSAGLVVRREAWL
CCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCEECCHHHCCCCCCCEEEEHHHHH
ESVPEQPILTGRVAGNMLTGEDLEMLCYLQKSGWEVWYNPEMEIYHRIPSSRLKKEYLIP
HHCCCCCCEEHHHCCCCCCCCCCEEEEEEECCCCEEEECCCHHEECCCCHHHHHHHHHHH
FFRGIGLSRYVTRTTNVQGYYKPFVLVAYMINDTRKIILQLLKYGTKIKTDLVIACETEL
HHHCCCHHHEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEECHHH
FFSSLISPFYLWKNGYLTKSGK
HHHHHHHHHEECCCCEEECCCC
>Mature Secondary Structure 
TANLDLTIAIPTYNGANRLPELLERLRNQINTENISWEIIVVDNNSTDNTAQVVQQYQE
CCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHH
NWHCSYPLKYYFEAKQGAAYARKKGVEVASGKLIGFLDDDNYPIPTWVAAACAFAQKYPK
CCCCCCCCEEEEECCCCHHHHHHCCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHCCC
AGAYGSQIHPDWEVEPPENFKSIIPFLAITERGNKPLFYEPRKKLLPPSAGLVVRREAWL
CCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCEECCHHHCCCCCCCEEEEHHHHH
ESVPEQPILTGRVAGNMLTGEDLEMLCYLQKSGWEVWYNPEMEIYHRIPSSRLKKEYLIP
HHCCCCCCEEHHHCCCCCCCCCCEEEEEEECCCCEEEECCCHHEECCCCHHHHHHHHHHH
FFRGIGLSRYVTRTTNVQGYYKPFVLVAYMINDTRKIILQLLKYGTKIKTDLVIACETEL
HHHCCCHHHEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEEECHHH
FFSSLISPFYLWKNGYLTKSGK
HHHHHHHHHEECCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2647748 [H]