Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17229256

Identifier: 17229256

GI number: 17229256

Start: 2119743

End: 2120393

Strand: Reverse

Name: 17229256

Synonym: all1764

Alternate gene names: NA

Gene position: 2120393-2119743 (Counterclockwise)

Preceding gene: 17229257

Following gene: 17229255

Centisome position: 33.06

GC content: 41.78

Gene sequence:

>651_bases
GTGCTGAAATCATCAGAAACTTTACAACAGCACTTAATTATTTTCACGCGCTATCCAGAACCAGGGAAAACAAAAACCAG
ATTGATACCTGCTTTGGGTACTATTGGTGCTGCCAAGCTGCAACGGCAAATGACTGAATACGCTTTATTTCAGGTTAAGG
AACTGCAAAAGTTAATTAATATATCTTTAGAAATTCGGTTTGCGGGGGGAGACCTGCAACTTATGCAAGATTGGCTTGGC
GCTGAATTGGTTTACCATTCTCAAGGTGATGGAGATTTGGGTTCGCGGATGGCGCGATCGCTGTATGATTCCTTTCAAGG
TCAGGCAAAGCAAGTTGTAATTATCGGTACCGACTGTCCTGGATTAAATTCTCATATTCTTGCTCAAGCTTTCGAACAAA
TTTATACAGTTGACTTAGTACTTGGTCCAGCCATTGATGGTGGTTACTACTTAATTGCTTTACGTCGCTTCATCCCTGAA
TTATTTGCCAACATCGACTGGGGGACTTCGCAAGTATTACACCAAACTGTGGATATTGCTCATCAACTCAACCTCTCATC
CTATCACTTACCACCATTGGCTGATGTTGATAGACCAGATGATTTACCCATTTGGCAACGAATTTGGGAAACAGAAGTTA
AGATGAGGTAG

Upstream 100 bases:

>100_bases
TTTTGGGAGCAATGCGTACAGCTAAAGAGCGTAATAGGGCTAATAGCGGCGGTGATTATTGCTATTAAGATATTTTTAGT
TAGCTTAAACAAGGTATGCT

Downstream 100 bases:

>100_bases
GTCAATTTATCTCATTCACCCTTGTATTATACAATACATAATTATCTTTAGTTACACTCTAGGAAACCGATGCCAATGTA
GAGCAGTTTCCAACCCAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MLKSSETLQQHLIIFTRYPEPGKTKTRLIPALGTIGAAKLQRQMTEYALFQVKELQKLINISLEIRFAGGDLQLMQDWLG
AELVYHSQGDGDLGSRMARSLYDSFQGQAKQVVIIGTDCPGLNSHILAQAFEQIYTVDLVLGPAIDGGYYLIALRRFIPE
LFANIDWGTSQVLHQTVDIAHQLNLSSYHLPPLADVDRPDDLPIWQRIWETEVKMR

Sequences:

>Translated_216_residues
MLKSSETLQQHLIIFTRYPEPGKTKTRLIPALGTIGAAKLQRQMTEYALFQVKELQKLINISLEIRFAGGDLQLMQDWLG
AELVYHSQGDGDLGSRMARSLYDSFQGQAKQVVIIGTDCPGLNSHILAQAFEQIYTVDLVLGPAIDGGYYLIALRRFIPE
LFANIDWGTSQVLHQTVDIAHQLNLSSYHLPPLADVDRPDDLPIWQRIWETEVKMR
>Mature_216_residues
MLKSSETLQQHLIIFTRYPEPGKTKTRLIPALGTIGAAKLQRQMTEYALFQVKELQKLINISLEIRFAGGDLQLMQDWLG
AELVYHSQGDGDLGSRMARSLYDSFQGQAKQVVIIGTDCPGLNSHILAQAFEQIYTVDLVLGPAIDGGYYLIALRRFIPE
LFANIDWGTSQVLHQTVDIAHQLNLSSYHLPPLADVDRPDDLPIWQRIWETEVKMR

Specific function: Unknown

COG id: COG3222

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24419; Mature: 24419

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSSETLQQHLIIFTRYPEPGKTKTRLIPALGTIGAAKLQRQMTEYALFQVKELQKLIN
CCCCHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ISLEIRFAGGDLQLMQDWLGAELVYHSQGDGDLGSRMARSLYDSFQGQAKQVVIIGTDCP
CEEEEEECCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCC
GLNSHILAQAFEQIYTVDLVLGPAIDGGYYLIALRRFIPELFANIDWGTSQVLHQTVDIA
CCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
HQLNLSSYHLPPLADVDRPDDLPIWQRIWETEVKMR
HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKSSETLQQHLIIFTRYPEPGKTKTRLIPALGTIGAAKLQRQMTEYALFQVKELQKLIN
CCCCHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ISLEIRFAGGDLQLMQDWLGAELVYHSQGDGDLGSRMARSLYDSFQGQAKQVVIIGTDCP
CEEEEEECCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCC
GLNSHILAQAFEQIYTVDLVLGPAIDGGYYLIALRRFIPELFANIDWGTSQVLHQTVDIA
CCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
HQLNLSSYHLPPLADVDRPDDLPIWQRIWETEVKMR
HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA