| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229248
Identifier: 17229248
GI number: 17229248
Start: 2109762
End: 2110583
Strand: Reverse
Name: 17229248
Synonym: all1756
Alternate gene names: NA
Gene position: 2110583-2109762 (Counterclockwise)
Preceding gene: 17229249
Following gene: 17229247
Centisome position: 32.91
GC content: 39.17
Gene sequence:
>822_bases ATGTCATCTCAGTGGGAACGTTTATTGCTTAATCTTGGTGAATGGCAAGGTTCATTTACTCGGTTTTCACCCCAAGGTCA ACTTTTAAATGATATTCCAACGGTTGTTTCTTTGGCAGGATTGAATAACAATCAAACAGTCCGCCAGATTATTCGTCAAG AAGATACAGAAAAGGTTCTAGAGTATAGTTCCTTGGCCAGAAGTGTGCTGTTTTTTGAAAATGGTGCTTTTTCTCAAGGT TCAATTCAGTTAGCTCCATTCTCGGAATTTGGTGCAGAATTAGGTTTAATTCATGAAAATCGCCGCCTGCGCTTGGTGCA GTTATTTGACAAAAACGGTCAGTTAGACCAACTAACTTTAATTCGTGAACATTTAGCAGGTACACCAGCAACAGAGAACG CACCCTTACAAATTGATGATTTATTAGGCGAATGGCAAGGTGAAGCAATAACAATTTATCCTGATTGGCGATCGCCTGAT ACTATTTCTACAAACCTCAAATTACAACTAGATGAGAATGGGCGCTTAATTCAAACCTTAAATTTTGCAGGACGCGCCAT AACTTCTACTGCTACTATCAAAGGCTCAATTATTCTCTTTGATCAAGACCCAGAAAAACAAGTACAAGTCTTACTTTTAC CTAATGGTGCTTCTGCTACTTCTCCACTCAAAGTACAGGTACGTCAAAGCTTTATTTTAGAAGTGGGTTGGTTAATTCAA CCAAACTTACGCCAACGTATGGTTCGTAGCTATAGCGATAAAGGCGAATGGGTGAGTCTAACTTTAGTCACTGAACAACG GCTTAAAACTCATAAGTTGTGA
Upstream 100 bases:
>100_bases AAGCAGAATAGCTTAGTCAGGACTTTAGTCCTTGTTTCCCCAGCACTAAACAAGCCTCAAAACTGATATGCTACTGAGCA TTTAGTATTTATTACCTACT
Downstream 100 bases:
>100_bases CATATTAAAATCCGAAAAAGGGAAATATAAGTTTGTAGATCAGGTTATACAAACTTTAAGGAATTAAGTATGAAAAGCTT CAATTGCAAACCTGCAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSSQWERLLLNLGEWQGSFTRFSPQGQLLNDIPTVVSLAGLNNNQTVRQIIRQEDTEKVLEYSSLARSVLFFENGAFSQG SIQLAPFSEFGAELGLIHENRRLRLVQLFDKNGQLDQLTLIREHLAGTPATENAPLQIDDLLGEWQGEAITIYPDWRSPD TISTNLKLQLDENGRLIQTLNFAGRAITSTATIKGSIILFDQDPEKQVQVLLLPNGASATSPLKVQVRQSFILEVGWLIQ PNLRQRMVRSYSDKGEWVSLTLVTEQRLKTHKL
Sequences:
>Translated_273_residues MSSQWERLLLNLGEWQGSFTRFSPQGQLLNDIPTVVSLAGLNNNQTVRQIIRQEDTEKVLEYSSLARSVLFFENGAFSQG SIQLAPFSEFGAELGLIHENRRLRLVQLFDKNGQLDQLTLIREHLAGTPATENAPLQIDDLLGEWQGEAITIYPDWRSPD TISTNLKLQLDENGRLIQTLNFAGRAITSTATIKGSIILFDQDPEKQVQVLLLPNGASATSPLKVQVRQSFILEVGWLIQ PNLRQRMVRSYSDKGEWVSLTLVTEQRLKTHKL >Mature_272_residues SSQWERLLLNLGEWQGSFTRFSPQGQLLNDIPTVVSLAGLNNNQTVRQIIRQEDTEKVLEYSSLARSVLFFENGAFSQGS IQLAPFSEFGAELGLIHENRRLRLVQLFDKNGQLDQLTLIREHLAGTPATENAPLQIDDLLGEWQGEAITIYPDWRSPDT ISTNLKLQLDENGRLIQTLNFAGRAITSTATIKGSIILFDQDPEKQVQVLLLPNGASATSPLKVQVRQSFILEVGWLIQP NLRQRMVRSYSDKGEWVSLTLVTEQRLKTHKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30794; Mature: 30663
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQWERLLLNLGEWQGSFTRFSPQGQLLNDIPTVVSLAGLNNNQTVRQIIRQEDTEKVL CCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHEEECCCCCHHHHHHHHHCHHHHHH EYSSLARSVLFFENGAFSQGSIQLAPFSEFGAELGLIHENRRLRLVQLFDKNGQLDQLTL HHHHHHHHEEEEECCCCCCCEEEEEEHHHHCCEEEEEECCCCEEEEEEECCCCCCHHHHH IREHLAGTPATENAPLQIDDLLGEWQGEAITIYPDWRSPDTISTNLKLQLDENGRLIQTL HHHHHCCCCCCCCCCEEHHHHHHCCCCCEEEEEECCCCCCCEECEEEEEECCCCCEEEEE NFAGRAITSTATIKGSIILFDQDPEKQVQVLLLPNGASATSPLKVQVRQSFILEVGWLIQ ECCCCEEEEEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHEECCEEC PNLRQRMVRSYSDKGEWVSLTLVTEQRLKTHKL CHHHHHHHHHHCCCCCEEEEEEEEHHHHHHCCC >Mature Secondary Structure SSQWERLLLNLGEWQGSFTRFSPQGQLLNDIPTVVSLAGLNNNQTVRQIIRQEDTEKVL CCHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHEEECCCCCHHHHHHHHHCHHHHHH EYSSLARSVLFFENGAFSQGSIQLAPFSEFGAELGLIHENRRLRLVQLFDKNGQLDQLTL HHHHHHHHEEEEECCCCCCCEEEEEEHHHHCCEEEEEECCCCEEEEEEECCCCCCHHHHH IREHLAGTPATENAPLQIDDLLGEWQGEAITIYPDWRSPDTISTNLKLQLDENGRLIQTL HHHHHCCCCCCCCCCEEHHHHHHCCCCCEEEEEECCCCCCCEECEEEEEECCCCCEEEEE NFAGRAITSTATIKGSIILFDQDPEKQVQVLLLPNGASATSPLKVQVRQSFILEVGWLIQ ECCCCEEEEEEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHEECCEEC PNLRQRMVRSYSDKGEWVSLTLVTEQRLKTHKL CHHHHHHHHHHCCCCCEEEEEEEEHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA