| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17229232
Identifier: 17229232
GI number: 17229232
Start: 2091223
End: 2091621
Strand: Direct
Name: 17229232
Synonym: alr1740
Alternate gene names: NA
Gene position: 2091223-2091621 (Clockwise)
Preceding gene: 17229226
Following gene: 17229234
Centisome position: 32.61
GC content: 41.1
Gene sequence:
>399_bases GTGGCAGATTTGTCTAATGTTTGGCTGGAAAAGTGTGCCAATTCCACCTTTGAAAATTTCTACTATGGAGTGCCAATTTT AAAACGTTGGGGAGTGCATAAAGTTAGACTAATTACTTCACCCACTCATTTACCAAGAGCTAAATGGATGGCACAGATTC TTTTAGGCGCTCATGGTATTTGGGTAGAAGTTGAGGTCGTTAAAGAAACTGGTGTTCCTGGTAATCGGGAGTCTTGGATC AAAACAGGGTTAGATGTCACTCGTAGCATATTATGGGCTGGCTTGAGTCAAATTATTCAGCCCCAATGCCCAAAAGTTAT GCAACTGAGCAAAGTAAATATGTCAACTTGGCAAAGTCGAGGTTTTAAGTGTGAATATCAAGGGGACTTGAGGATGTGA
Upstream 100 bases:
>100_bases AATTTATATTGCCCAAATAGCCAAACAATATCCACAAATTCCCATTTTAATTTCCCAAGGTTCTCCAGACCCATGTATCA AGCTAATTTTCCAGCGTGAG
Downstream 100 bases:
>100_bases GAGGTTAACAATTCAAAATTCAAAATTCAAAATTCAAAATTAAATACAGCCACCCACAAGGGGATGAGGAATCTGGTAAT GGGTAATGGGTAATAGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MADLSNVWLEKCANSTFENFYYGVPILKRWGVHKVRLITSPTHLPRAKWMAQILLGAHGIWVEVEVVKETGVPGNRESWI KTGLDVTRSILWAGLSQIIQPQCPKVMQLSKVNMSTWQSRGFKCEYQGDLRM
Sequences:
>Translated_132_residues MADLSNVWLEKCANSTFENFYYGVPILKRWGVHKVRLITSPTHLPRAKWMAQILLGAHGIWVEVEVVKETGVPGNRESWI KTGLDVTRSILWAGLSQIIQPQCPKVMQLSKVNMSTWQSRGFKCEYQGDLRM >Mature_131_residues ADLSNVWLEKCANSTFENFYYGVPILKRWGVHKVRLITSPTHLPRAKWMAQILLGAHGIWVEVEVVKETGVPGNRESWIK TGLDVTRSILWAGLSQIIQPQCPKVMQLSKVNMSTWQSRGFKCEYQGDLRM
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15117; Mature: 14986
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLSNVWLEKCANSTFENFYYGVPILKRWGVHKVRLITSPTHLPRAKWMAQILLGAHGI CCCHHHHHHHHHCCCHHHHHCCCCHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCCE WVEVEVVKETGVPGNRESWIKTGLDVTRSILWAGLSQIIQPQCPKVMQLSKVNMSTWQSR EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHCC GFKCEYQGDLRM CCEEECCCCCCC >Mature Secondary Structure ADLSNVWLEKCANSTFENFYYGVPILKRWGVHKVRLITSPTHLPRAKWMAQILLGAHGI CCHHHHHHHHHCCCHHHHHCCCCHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCCE WVEVEVVKETGVPGNRESWIKTGLDVTRSILWAGLSQIIQPQCPKVMQLSKVNMSTWQSR EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHCC GFKCEYQGDLRM CCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA