| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229221
Identifier: 17229221
GI number: 17229221
Start: 2079166
End: 2079810
Strand: Reverse
Name: 17229221
Synonym: all1729
Alternate gene names: NA
Gene position: 2079810-2079166 (Counterclockwise)
Preceding gene: 17229222
Following gene: 17229217
Centisome position: 32.43
GC content: 40.47
Gene sequence:
>645_bases ATGACTCATAAAACTAACGGTTCAGACGCTTGCCATTCTGTAGTATCTCAAATGGAATTAGATTTATTAGCAGCTTTATT AGAACCAGAGGATGCAGCCTATCCTTGGAATCCCTCTGACGATGAGTCAGAAACATATTTTGAAGAACTAGAGCGTAAAT TTGCTCAAGATGTATCTGATGAAGAATTTACCACCAGGGCGCAGGTTTTTTACGACAAACTAGATCACCTATGGTCAGGA GTAACACCTTCTTCATACTACAATCATACTACGTTGTCGGTAGTTGTAGATCATCTTCAAGAAAATTTACATACAGCTTT TGCGACTGGTATCCCACAAAATTGGCTAAATGCGATCGCCACCAAAGCAGCAGAAATTTTCGCTTCTCAACAATCTCTAG GCGAACAACTAGTAGAGTGTGTACAGAGTGTATTACCCACATGGGAAGCAGATGACTTGTTGATTTTCGCCCGTCCCTAT GCTTATTCCATGCGGAGCAGCGAAGGGCAAAATTTAACATCTATAGTTGATAACGTTAATAATCAAGAGTGGTCTGCTCT ATCAGAAGTTGAGCAAGCAAAGTTAAGTGTAGCGATCGCTTACTATGCAATCAGACAACTCAATGATTCTCCGTCAGAGT CTTAA
Upstream 100 bases:
>100_bases TAATTTGAAGATTATAAAAAAACGTTTTTTTTTGCGGAAATCCAAATCTGAGTGCTGTAGCTGTCAATGTCAACTAAATC AATTTATCAGGAGGCAATCA
Downstream 100 bases:
>100_bases ATTCTAAAGCTTTTTTATATATTTTGACCTTGATACTTTTCCCGTGAACAGTGATTTTGCTCACAGGTGACACTTTTGTC GGATTTTTTTAGTTTTTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTHKTNGSDACHSVVSQMELDLLAALLEPEDAAYPWNPSDDESETYFEELERKFAQDVSDEEFTTRAQVFYDKLDHLWSG VTPSSYYNHTTLSVVVDHLQENLHTAFATGIPQNWLNAIATKAAEIFASQQSLGEQLVECVQSVLPTWEADDLLIFARPY AYSMRSSEGQNLTSIVDNVNNQEWSALSEVEQAKLSVAIAYYAIRQLNDSPSES
Sequences:
>Translated_214_residues MTHKTNGSDACHSVVSQMELDLLAALLEPEDAAYPWNPSDDESETYFEELERKFAQDVSDEEFTTRAQVFYDKLDHLWSG VTPSSYYNHTTLSVVVDHLQENLHTAFATGIPQNWLNAIATKAAEIFASQQSLGEQLVECVQSVLPTWEADDLLIFARPY AYSMRSSEGQNLTSIVDNVNNQEWSALSEVEQAKLSVAIAYYAIRQLNDSPSES >Mature_213_residues THKTNGSDACHSVVSQMELDLLAALLEPEDAAYPWNPSDDESETYFEELERKFAQDVSDEEFTTRAQVFYDKLDHLWSGV TPSSYYNHTTLSVVVDHLQENLHTAFATGIPQNWLNAIATKAAEIFASQQSLGEQLVECVQSVLPTWEADDLLIFARPYA YSMRSSEGQNLTSIVDNVNNQEWSALSEVEQAKLSVAIAYYAIRQLNDSPSES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24005; Mature: 23874
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHKTNGSDACHSVVSQMELDLLAALLEPEDAAYPWNPSDDESETYFEELERKFAQDVSD CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC EEFTTRAQVFYDKLDHLWSGVTPSSYYNHTTLSVVVDHLQENLHTAFATGIPQNWLNAIA HHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH TKAAEIFASQQSLGEQLVECVQSVLPTWEADDLLIFARPYAYSMRSSEGQNLTSIVDNVN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCCHHHHHHHCCC NQEWSALSEVEQAKLSVAIAYYAIRQLNDSPSES CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure THKTNGSDACHSVVSQMELDLLAALLEPEDAAYPWNPSDDESETYFEELERKFAQDVSD CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC EEFTTRAQVFYDKLDHLWSGVTPSSYYNHTTLSVVVDHLQENLHTAFATGIPQNWLNAIA HHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH TKAAEIFASQQSLGEQLVECVQSVLPTWEADDLLIFARPYAYSMRSSEGQNLTSIVDNVN HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHCCCCCHHHHHHHCCC NQEWSALSEVEQAKLSVAIAYYAIRQLNDSPSES CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA