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The map label for this gene is ygbL [C]

Identifier: 17229215

GI number: 17229215

Start: 2072201

End: 2072962

Strand: Reverse

Name: ygbL [C]

Synonym: all1723

Alternate gene names: 17229215

Gene position: 2072962-2072201 (Counterclockwise)

Preceding gene: 17229216

Following gene: 17229212

Centisome position: 32.32

GC content: 46.85

Gene sequence:

>762_bases
ATGTCCGTATTTAGTAGACCCCTACCCCCCGTATTTAACAGTATTGAAGAAGAACGCCTACACCGCAAACAGCGTCTAGC
AGCAGCTTTTCGCCTGTTTGGCAAGTTTGGCTTTAGCGAAGGAATTGCAGGTCACATCACAGCTCGTGACCCGGAATTTA
CGGACCACTTTTGGGTAAATCCCTTAGGGAAGTACTTTGGACACATTCGAGTTTCTGACTTGGTATTAGTGAATCGAGAT
GGTGATGTGGTCAAAGGCGACGCACTGATAAATCAAGCTGCTTTTGCCATCCATTCCCAAATTCATGAAGCTCGTCCCGA
TGTCGTCGCGGCTGCTCATGCTCACTCGATTTATGGTAAAGCTTGGTCTAGCTTAGGTCGTCTACTCGACCCTTTAACAC
AAGATGCTTGCGCTTTTTACGAAGACCACGCCTTGCTGGATGACTATACAGGGGTCGTTTTAGAAACTTCTGAAGGTAAA
CGACTGGCTGAAACCTTAGGTAATAACAAAGCGCTGATTTTGCGGAATCATGGCATTCTCACCGTAGGACACACAGTAGA
TGAAGCCGCATTTTGGTACATTAGCCTAGAGCGTTCTTGCCAAGCTCAACTACTTGCGGAAGCTGCGGGTCAACCCAAAA
TAATTGGCCATGAAACTGCCCGTTTAACCCATAGTCAAGTGGGTGAACCGAAAGCAGGTTGGTTTAGTTTTCAGCCTCTT
TACGATAGAGTCGCGCGCGAAGAACCTGAATTGTTTGATTAG

Upstream 100 bases:

>100_bases
ATTTTTGCTGTCACAACTACATCTGGGAGTCCATCTGTCTTTATTTATGTCCTACGGTATTTGTTAATAAACGTTAGCAA
AAAAGTATCGGAAAAAGAAA

Downstream 100 bases:

>100_bases
GCACAATTCAGGAGGCAGAAAGTCAGAGGAAAAGCTGTTAGAGGCTATTTATAAAGTAAATTAGTGAAAATCGGACAGAC
CTAGAGACCGGACATAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MSVFSRPLPPVFNSIEEERLHRKQRLAAAFRLFGKFGFSEGIAGHITARDPEFTDHFWVNPLGKYFGHIRVSDLVLVNRD
GDVVKGDALINQAAFAIHSQIHEARPDVVAAAHAHSIYGKAWSSLGRLLDPLTQDACAFYEDHALLDDYTGVVLETSEGK
RLAETLGNNKALILRNHGILTVGHTVDEAAFWYISLERSCQAQLLAEAAGQPKIIGHETARLTHSQVGEPKAGWFSFQPL
YDRVAREEPELFD

Sequences:

>Translated_253_residues
MSVFSRPLPPVFNSIEEERLHRKQRLAAAFRLFGKFGFSEGIAGHITARDPEFTDHFWVNPLGKYFGHIRVSDLVLVNRD
GDVVKGDALINQAAFAIHSQIHEARPDVVAAAHAHSIYGKAWSSLGRLLDPLTQDACAFYEDHALLDDYTGVVLETSEGK
RLAETLGNNKALILRNHGILTVGHTVDEAAFWYISLERSCQAQLLAEAAGQPKIIGHETARLTHSQVGEPKAGWFSFQPL
YDRVAREEPELFD
>Mature_252_residues
SVFSRPLPPVFNSIEEERLHRKQRLAAAFRLFGKFGFSEGIAGHITARDPEFTDHFWVNPLGKYFGHIRVSDLVLVNRDG
DVVKGDALINQAAFAIHSQIHEARPDVVAAAHAHSIYGKAWSSLGRLLDPLTQDACAFYEDHALLDDYTGVVLETSEGKR
LAETLGNNKALILRNHGILTVGHTVDEAAFWYISLERSCQAQLLAEAAGQPKIIGHETARLTHSQVGEPKAGWFSFQPLY
DRVAREEPELFD

Specific function: Unknown

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family [H]

Homologues:

Organism=Homo sapiens, GI29826325, Length=197, Percent_Identity=36.0406091370558, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI29826323, Length=197, Percent_Identity=36.0406091370558, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI29826321, Length=204, Percent_Identity=36.2745098039216, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI29826319, Length=197, Percent_Identity=36.0406091370558, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI89276787, Length=240, Percent_Identity=29.5833333333333, Blast_Score=98, Evalue=9e-21,
Organism=Homo sapiens, GI297307160, Length=240, Percent_Identity=29.5833333333333, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI9257190, Length=240, Percent_Identity=29.5833333333333, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI9943848, Length=207, Percent_Identity=32.3671497584541, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI9951927, Length=207, Percent_Identity=32.3671497584541, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI62912453, Length=207, Percent_Identity=32.3671497584541, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI297307158, Length=240, Percent_Identity=29.5833333333333, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI9257192, Length=240, Percent_Identity=29.5833333333333, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI115533216, Length=199, Percent_Identity=29.6482412060301, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI115533218, Length=199, Percent_Identity=29.6482412060301, Blast_Score=103, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI71989560, Length=205, Percent_Identity=30.2439024390244, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI71989541, Length=205, Percent_Identity=30.2439024390244, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71989550, Length=205, Percent_Identity=30.2439024390244, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71989544, Length=205, Percent_Identity=30.2439024390244, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71989555, Length=205, Percent_Identity=30.2439024390244, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI281363763, Length=186, Percent_Identity=37.6344086021505, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281363757, Length=186, Percent_Identity=37.6344086021505, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI17136738, Length=186, Percent_Identity=37.6344086021505, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281363755, Length=186, Percent_Identity=37.6344086021505, Blast_Score=108, Evalue=3e-24,
Organism=Drosophila melanogaster, GI281363751, Length=186, Percent_Identity=37.6344086021505, Blast_Score=108, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24655690, Length=186, Percent_Identity=37.6344086021505, Blast_Score=108, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24655685, Length=186, Percent_Identity=37.6344086021505, Blast_Score=108, Evalue=3e-24,
Organism=Drosophila melanogaster, GI281363761, Length=186, Percent_Identity=37.6344086021505, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI281363759, Length=186, Percent_Identity=37.6344086021505, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI281363753, Length=186, Percent_Identity=37.6344086021505, Blast_Score=108, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: NA

Molecular weight: Translated: 28168; Mature: 28037

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFSRPLPPVFNSIEEERLHRKQRLAAAFRLFGKFGFSEGIAGHITARDPEFTDHFWVN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
PLGKYFGHIRVSDLVLVNRDGDVVKGDALINQAAFAIHSQIHEARPDVVAAAHAHSIYGK
CHHHHHCCEEEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AWSSLGRLLDPLTQDACAFYEDHALLDDYTGVVLETSEGKRLAETLGNNKALILRNHGIL
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEECCCCHHHHHHHCCCCEEEEECCCEE
TVGHTVDEAAFWYISLERSCQAQLLAEAAGQPKIIGHETARLTHSQVGEPKAGWFSFQPL
EECCCCCCCEEEEEEECHHHHHHHHHHHCCCCCEECCHHHHHHHHHCCCCCCCCEECCHH
YDRVAREEPELFD
HHHHHCCCCCCCC
>Mature Secondary Structure 
SVFSRPLPPVFNSIEEERLHRKQRLAAAFRLFGKFGFSEGIAGHITARDPEFTDHFWVN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
PLGKYFGHIRVSDLVLVNRDGDVVKGDALINQAAFAIHSQIHEARPDVVAAAHAHSIYGK
CHHHHHCCEEEEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
AWSSLGRLLDPLTQDACAFYEDHALLDDYTGVVLETSEGKRLAETLGNNKALILRNHGIL
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEECCCCHHHHHHHCCCCEEEEECCCEE
TVGHTVDEAAFWYISLERSCQAQLLAEAAGQPKIIGHETARLTHSQVGEPKAGWFSFQPL
EECCCCCCCEEEEEEECHHHHHHHHHHHCCCCCEECCHHHHHHHHHCCCCCCCCEECCHH
YDRVAREEPELFD
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]