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The map label for this gene is bscR [H]

Identifier: 17229213

GI number: 17229213

Start: 2070435

End: 2071007

Strand: Direct

Name: bscR [H]

Synonym: alr1721

Alternate gene names: 17229213

Gene position: 2070435-2071007 (Clockwise)

Preceding gene: 17229210

Following gene: 17229214

Centisome position: 32.28

GC content: 36.3

Gene sequence:

>573_bases
ATGAGGCATAAAGACAATAAAAAAAATCAAGCCATCTGTGATGCGGCAATCGAACTGATTACTGCCAATGGTTTTGCTGA
CACTTCGATGTCGAAAATTGCCAAAGCCGCGAATGTTTCGCCAGCGACGATATATGTCTATTTTGAAAACAAAGAAAAGC
TTCTCAATAAAATATATTTGTTCGTGAAGCAGGAAATAAGTGCAGAAATTTTAAAAGGTGTCAACCAGAACCTATCAGTG
GAGAAAGCCTTTAAAATGATCTGGAATAATTATTATAAATACGCGATTAAAAATCCGGTCAGATTTGCTTTTACGGAGCA
ATTTGCTAATTCCCCAATGGTTGACCGCATTTGCAAAGATGAAAGTTTGAGCTATTTTAAGCCAATGCTAGATTTGTTCA
ATCGCGGTAAAGAAGAGAAAGTTTTTAAGGATATTCCCCTGGAAATTTTTACCGCTTTTACCTTTGCGCCTCTGACTGGA
TTGATAAAAGAGCATTTTAGTGGTGCTTTGATTTTGGACGAAAAAATGTTAGAAACCACCTATAAAATTGCATGGGATGC
AGTAACGAATTAA

Upstream 100 bases:

>100_bases
AAATAGCATAGGGGATATCCAAAAAATAAATCTCCCCCTAACTGCTCATCAAATTGAGCTTTACTTGTAAATAAACGAAT
GTTCGTTTATTATAGTAACT

Downstream 100 bases:

>100_bases
TTCTTTTTTCGAGTACATTAAACGAATATTCGATTAATTAATTAGGAGAAGAGTAAATCAAATGAAAAATGAAAAATGGA
ACGCTGAAAATATTCCTCCT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MRHKDNKKNQAICDAAIELITANGFADTSMSKIAKAANVSPATIYVYFENKEKLLNKIYLFVKQEISAEILKGVNQNLSV
EKAFKMIWNNYYKYAIKNPVRFAFTEQFANSPMVDRICKDESLSYFKPMLDLFNRGKEEKVFKDIPLEIFTAFTFAPLTG
LIKEHFSGALILDEKMLETTYKIAWDAVTN

Sequences:

>Translated_190_residues
MRHKDNKKNQAICDAAIELITANGFADTSMSKIAKAANVSPATIYVYFENKEKLLNKIYLFVKQEISAEILKGVNQNLSV
EKAFKMIWNNYYKYAIKNPVRFAFTEQFANSPMVDRICKDESLSYFKPMLDLFNRGKEEKVFKDIPLEIFTAFTFAPLTG
LIKEHFSGALILDEKMLETTYKIAWDAVTN
>Mature_190_residues
MRHKDNKKNQAICDAAIELITANGFADTSMSKIAKAANVSPATIYVYFENKEKLLNKIYLFVKQEISAEILKGVNQNLSV
EKAFKMIWNNYYKYAIKNPVRFAFTEQFANSPMVDRICKDESLSYFKPMLDLFNRGKEEKVFKDIPLEIFTAFTFAPLTG
LIKEHFSGALILDEKMLETTYKIAWDAVTN

Specific function: Negatively regulates the transcription of the bscR- CYP102A3 operon [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21836; Mature: 21836

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHKDNKKNQAICDAAIELITANGFADTSMSKIAKAANVSPATIYVYFENKEKLLNKIYL
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHH
FVKQEISAEILKGVNQNLSVEKAFKMIWNNYYKYAIKNPVRFAFTEQFANSPMVDRICKD
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCC
ESLSYFKPMLDLFNRGKEEKVFKDIPLEIFTAFTFAPLTGLIKEHFSGALILDEKMLETT
CCHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHH
YKIAWDAVTN
HHHHHHCCCC
>Mature Secondary Structure
MRHKDNKKNQAICDAAIELITANGFADTSMSKIAKAANVSPATIYVYFENKEKLLNKIYL
CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHH
FVKQEISAEILKGVNQNLSVEKAFKMIWNNYYKYAIKNPVRFAFTEQFANSPMVDRICKD
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHCC
ESLSYFKPMLDLFNRGKEEKVFKDIPLEIFTAFTFAPLTGLIKEHFSGALILDEKMLETT
CCHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHH
YKIAWDAVTN
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]