| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229210
Identifier: 17229210
GI number: 17229210
Start: 2068785
End: 2069153
Strand: Direct
Name: 17229210
Synonym: alr1718
Alternate gene names: NA
Gene position: 2068785-2069153 (Clockwise)
Preceding gene: 17229207
Following gene: 17229213
Centisome position: 32.26
GC content: 48.78
Gene sequence:
>369_bases ATGTCAGATACAAGTAAACGTGGCTTTGCTTCTATGGATGAAGACAAGCAACGTGAAATCGCCAGCAAAGGCGGACAGGC TGCTCATGAAAAAGGTACTGCTCACGAATTTACCCCCGAAGAAGCTCGTGAAGCTGGACGCAAAGGCGGAGAAGCTGTTA GCCAAGACAGAGAACACATGGCGGAAATCGGCCGTGAGGGCGGTAAACATTCTCATGGTGGTGGACGCAAGAAACAAGGT GGCGAAGAAAGCGAAGACACCGAAGAAATTGAAGATAGCGGCGAAGAAACGCAAACTCGTGGTGGTACACCCGAACAGCA CTCTGAAGCCGGAAAGCAAAGCCATAAAAATACCAAGAAGAAAAAATAG
Upstream 100 bases:
>100_bases GAAGGTCACTAAATTACTTGGCTAAATTGATAACGAATCATATAAAGATTTTCACTGGCTGAAAAGTCAACAAATCTGCT TAGTAACAAGGAGCAAGATT
Downstream 100 bases:
>100_bases CTTTTGTTTAACTTAATGGCTTGATAGTTTCTTCGTGATAGTTCAATCCGGTTCAGTTAAGAGAATAGTAGGTTGGTTGT AGCGATAGCGTAACCCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSDTSKRGFASMDEDKQREIASKGGQAAHEKGTAHEFTPEEAREAGRKGGEAVSQDREHMAEIGREGGKHSHGGGRKKQG GEESEDTEEIEDSGEETQTRGGTPEQHSEAGKQSHKNTKKKK
Sequences:
>Translated_122_residues MSDTSKRGFASMDEDKQREIASKGGQAAHEKGTAHEFTPEEAREAGRKGGEAVSQDREHMAEIGREGGKHSHGGGRKKQG GEESEDTEEIEDSGEETQTRGGTPEQHSEAGKQSHKNTKKKK >Mature_121_residues SDTSKRGFASMDEDKQREIASKGGQAAHEKGTAHEFTPEEAREAGRKGGEAVSQDREHMAEIGREGGKHSHGGGRKKQGG EESEDTEEIEDSGEETQTRGGTPEQHSEAGKQSHKNTKKKK
Specific function: Unknown
COG id: COG3729
COG function: function code R; General stress protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13230; Mature: 13099
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTSKRGFASMDEDKQREIASKGGQAAHEKGTAHEFTPEEAREAGRKGGEAVSQDREHM CCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH AEIGREGGKHSHGGGRKKQGGEESEDTEEIEDSGEETQTRGGTPEQHSEAGKQSHKNTKK HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHCCC KK CC >Mature Secondary Structure SDTSKRGFASMDEDKQREIASKGGQAAHEKGTAHEFTPEEAREAGRKGGEAVSQDREHM CCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH AEIGREGGKHSHGGGRKKQGGEESEDTEEIEDSGEETQTRGGTPEQHSEAGKQSHKNTKK HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHCCC KK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA