| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229193
Identifier: 17229193
GI number: 17229193
Start: 2040372
End: 2041541
Strand: Reverse
Name: 17229193
Synonym: all1701
Alternate gene names: NA
Gene position: 2041541-2040372 (Counterclockwise)
Preceding gene: 17229194
Following gene: 17229191
Centisome position: 31.83
GC content: 46.32
Gene sequence:
>1170_bases ATGCGAACTATTGCGGAAATTAATGAAAAAATTAACCGTAAAACGGCGACAGTCCTAACGGTTGAGGAATTAAAGGCACG AGTTTTAGAAGTTGGTGTGAGTAAAGTTGCTCAAGAGGTTGATGTAGTTACTACTGGCACTTTTGAACCAATGGAATCAA CTGGCGCTATTCTCAATCTCGGACACACTGACCCACCAATCAAAATTCGCCGTTGCTGGTTAGATGGTGTTCCAGCATAC AGTGGTTTTGGGGCTGTTGATTTATACCTGGGTGCTAGCTGTGCTGTAGACTTGATGGACGGTGAAGAAGTCCGAGAACG TGGCGGCGGTCATGTGATCGAAGATTTAATCGCAGGTAAACCTATACACGTCAGAGCGCAAGGACAGGTAACTGATTGTT ATCCGAGAGCGAGTTTTGAAACAACAATTACCCGCGACACGATAAATCAGTTTTATCTATTCAATCCTCGGAATCTCTAC CAAAATTTTATCGTAGGTGTGAATGGAGGCGATCGCCCACTTCATACTTATCTCGGCCCCTTACAACCACGTTTGGGTAA TGCTGTTTACTCCAATCCTGGGGCAATTTCTCCCCTATTCAATGACCCTAACTTACAACTCGTTGGTATTGGCACAAGAA TTTTCTTGGGTGGTGGGATTGGTTATGTGGCTTGGGAAGGTACTCAACACTTTCCCTTACAAAAGCGCCTAGCCAATCAA ACCCCAATTGGCCCGGCGGCGACTCTAGCTTTAATTGGTGATGCCAAGCAAATGGATGCTCGTTGGGTGAGGGGTTGTTA TTTCAAAAGCTATGGTCCTTCGTTGATGTTGGGCGTAGGTATCCCACTGCCGGTGTTAAATGAAGAGGTTGTAGAACACT GTGCAGTTCAAGACCAAGATTTAGTAGCGCCAATAGTAGACTTTTCCATTCCTCGGCGCGTTCGTCCCACATTTGGTTTG GTGAGTTACGCCCAACTCAAGTCTGGGCGTATCACCATTGAGGGCAAAACAGTCCGGGCTGCTCCTTTGGCTAGTATGTT TCTAGCTCGACAGGTAGCCTTAGAGTTAAAACAGTGGATTGAGGCAGGTAGTTTCACTCTTACGGAACCAGTAGCACCGA TTCCCAAAGAGCGTTCGTTTCTGCCTCAAGACCGTTGGACGGATTTTTAG
Upstream 100 bases:
>100_bases TCTGATGAAGGTTATTGGATTTTTCTCGCCAAACTGATTTAATCGGTTATCTGGCAGACATACTGCCTCATAATTGAAAT GTCTATCCGCTACATTTAAA
Downstream 100 bases:
>100_bases GGATTGGGGATTAGGGATTAGGGATTGGGGATTGGGGATTGGGGATTAATATTTCTCCCCAGTCCCCCTACTCCCCAGCC TTCCCTGCTCCCTACTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MRTIAEINEKINRKTATVLTVEELKARVLEVGVSKVAQEVDVVTTGTFEPMESTGAILNLGHTDPPIKIRRCWLDGVPAY SGFGAVDLYLGASCAVDLMDGEEVRERGGGHVIEDLIAGKPIHVRAQGQVTDCYPRASFETTITRDTINQFYLFNPRNLY QNFIVGVNGGDRPLHTYLGPLQPRLGNAVYSNPGAISPLFNDPNLQLVGIGTRIFLGGGIGYVAWEGTQHFPLQKRLANQ TPIGPAATLALIGDAKQMDARWVRGCYFKSYGPSLMLGVGIPLPVLNEEVVEHCAVQDQDLVAPIVDFSIPRRVRPTFGL VSYAQLKSGRITIEGKTVRAAPLASMFLARQVALELKQWIEAGSFTLTEPVAPIPKERSFLPQDRWTDF
Sequences:
>Translated_389_residues MRTIAEINEKINRKTATVLTVEELKARVLEVGVSKVAQEVDVVTTGTFEPMESTGAILNLGHTDPPIKIRRCWLDGVPAY SGFGAVDLYLGASCAVDLMDGEEVRERGGGHVIEDLIAGKPIHVRAQGQVTDCYPRASFETTITRDTINQFYLFNPRNLY QNFIVGVNGGDRPLHTYLGPLQPRLGNAVYSNPGAISPLFNDPNLQLVGIGTRIFLGGGIGYVAWEGTQHFPLQKRLANQ TPIGPAATLALIGDAKQMDARWVRGCYFKSYGPSLMLGVGIPLPVLNEEVVEHCAVQDQDLVAPIVDFSIPRRVRPTFGL VSYAQLKSGRITIEGKTVRAAPLASMFLARQVALELKQWIEAGSFTLTEPVAPIPKERSFLPQDRWTDF >Mature_389_residues MRTIAEINEKINRKTATVLTVEELKARVLEVGVSKVAQEVDVVTTGTFEPMESTGAILNLGHTDPPIKIRRCWLDGVPAY SGFGAVDLYLGASCAVDLMDGEEVRERGGGHVIEDLIAGKPIHVRAQGQVTDCYPRASFETTITRDTINQFYLFNPRNLY QNFIVGVNGGDRPLHTYLGPLQPRLGNAVYSNPGAISPLFNDPNLQLVGIGTRIFLGGGIGYVAWEGTQHFPLQKRLANQ TPIGPAATLALIGDAKQMDARWVRGCYFKSYGPSLMLGVGIPLPVLNEEVVEHCAVQDQDLVAPIVDFSIPRRVRPTFGL VSYAQLKSGRITIEGKTVRAAPLASMFLARQVALELKQWIEAGSFTLTEPVAPIPKERSFLPQDRWTDF
Specific function: Unknown
COG id: COG1900
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR002708 - InterPro: IPR016426 - ProDom: PD011569 [H]
Pfam domain/function: PF00571 CBS; PF01837 DUF39 [H]
EC number: NA
Molecular weight: Translated: 42641; Mature: 42641
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIAEINEKINRKTATVLTVEELKARVLEVGVSKVAQEVDVVTTGTFEPMESTGAILNL CCCHHHHHHHHCCHHEEEEEHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCEEEC GHTDPPIKIRRCWLDGVPAYSGFGAVDLYLGASCAVDLMDGEEVRERGGGHVIEDLIAGK CCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCEEEECCCCHHHHHCCCCHHHHHHHCCC PIHVRAQGQVTDCYPRASFETTITRDTINQFYLFNPRNLYQNFIVGVNGGDRPLHTYLGP CEEEEECCCEEECCCCCCCCEEEEHHCCCEEEEECHHHHHCCEEEECCCCCCCHHHHHCC LQPRLGNAVYSNPGAISPLFNDPNLQLVGIGTRIFLGGGIGYVAWEGTQHFPLQKRLANQ CCHHHCCCEECCCCCCCCCCCCCCEEEEEECEEEEEECCEEEEEECCCCCCCHHHHHCCC TPIGPAATLALIGDAKQMDARWVRGCYFKSYGPSLMLGVGIPLPVLNEEVVEHCAVQDQD CCCCHHHEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCC LVAPIVDFSIPRRVRPTFGLVSYAQLKSGRITIEGKTVRAAPLASMFLARQVALELKQWI HHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCEEEHHHHHHHHHHHHHHHHHHHHH EAGSFTLTEPVAPIPKERSFLPQDRWTDF HCCCEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRTIAEINEKINRKTATVLTVEELKARVLEVGVSKVAQEVDVVTTGTFEPMESTGAILNL CCCHHHHHHHHCCHHEEEEEHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCEEEC GHTDPPIKIRRCWLDGVPAYSGFGAVDLYLGASCAVDLMDGEEVRERGGGHVIEDLIAGK CCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCEEEECCCCHHHHHCCCCHHHHHHHCCC PIHVRAQGQVTDCYPRASFETTITRDTINQFYLFNPRNLYQNFIVGVNGGDRPLHTYLGP CEEEEECCCEEECCCCCCCCEEEEHHCCCEEEEECHHHHHCCEEEECCCCCCCHHHHHCC LQPRLGNAVYSNPGAISPLFNDPNLQLVGIGTRIFLGGGIGYVAWEGTQHFPLQKRLANQ CCHHHCCCEECCCCCCCCCCCCCCEEEEEECEEEEEECCEEEEEECCCCCCCHHHHHCCC TPIGPAATLALIGDAKQMDARWVRGCYFKSYGPSLMLGVGIPLPVLNEEVVEHCAVQDQD CCCCHHHEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCC LVAPIVDFSIPRRVRPTFGLVSYAQLKSGRITIEGKTVRAAPLASMFLARQVALELKQWI HHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCEEEHHHHHHHHHHHHHHHHHHHHH EAGSFTLTEPVAPIPKERSFLPQDRWTDF HCCCEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]