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The map label for this gene is tnpA [H]

Identifier: 17229101

GI number: 17229101

Start: 1890543

End: 1891763

Strand: Direct

Name: tnpA [H]

Synonym: alr1609

Alternate gene names: 17229101

Gene position: 1890543-1891763 (Clockwise)

Preceding gene: 17229099

Following gene: 17229103

Centisome position: 29.48

GC content: 34.97

Gene sequence:

>1221_bases
ATGAAATTTCCCGTAGAGCAAATCCTCAATCTACCAGAGACGAAAGTGTTAGATTGTCAAGAAGTGGAAGGAGCAGGAAT
AATTATCACAATCGAAAAAGCCGTCAACCATTGTAGCTGTCCAAATTGTGGAAATGTAACTCAAAGTATACACCAAGACC
ATTGGCGAATGATTCACGATTTACCGTGGAGTGAAAAACCAGTTCTGTTAAAAATAAATCGTCGTCAATTTAAATGCCAT
AAGTGTAAAAAAGTGTTTAGTGAGAAACTAGAGTTTGTAGAAAAGAGCAAAGGATATACAAAAAGATTAGCAGCTAGCAT
AGTAGAGCAAGTATTGAATAGCAACATTCATAGCGTGGCTAAAAGAAACGACCTCAGTGATGAGGAAGTAGAATCGATGT
TAAAAAGGCAAGTAACCCAAATACAGAAGATAAATTTAAGAGGATTAAAAAGGTTAGGAATAGATGAAATAGCCTTAGTG
AAAGGGCAAGGAAATTATCTGGCAGTAATAGTAGATTTAGATACTCGTAAACCAATTGAGATAGTGAAGACAAGAAGGAT
AGAAGAAATCGGTGAAGTCATGAAAGGATGGGGATTCAAGGTACTTGAGCAAATCCAAGAAGTGAGTATAGACCTGTGGT
CTCCTTATAAAAGTCTAGTCGAAGAATTAATGCCCAATGCAAATATAACTGCTGATAGGTTTCATGTGATGAAACAGGTA
AATGATGAATTAGATACAATACGTAAATCCGAGAAAAAAGCAGCAATGTCTTTAGAAGATAAATCAGAAAAAGAACGAAT
ATTAGCGGGATTAAATAAAAGTAAATATAGCTTGATTAAAAATGAAGACTCGTTAAACGAAGAGCAAAAAATCAGACTGA
AAGCTGTCCAAGAAGTATCACCAACTCTAGCAAAGATGCACTCCTTGAAAGAAAAATTTAGACAAATCTTTGAATCTCAC
ACATCTTGGGGAGATAGCATCATTCAATTATTGGATTGGATGTATGATGCCATGCTACTTTTTCCCAAATCTATCGGAAC
AATGATTAGATGGTTTGGGGAAATAGTTGGTTATTTTGATGGTAGAACTACCAGTGGTACTGTAGAAGGTATTAATAATA
AACTTAAGCTGATTAAACGTCTTGGATATGGTTTCCGTAACTTCAACAATTTCCGTTTACGCAGTTTATTAAACTGGCAC
TTTAGTATTAATTCTCCATAA

Upstream 100 bases:

>100_bases
TAAACTAGAGTAGATACAATACTTTACAGCTTTGAAGGTATGTTTAATTACCGAAAGTAAGATAATTATAGATCAAGCAC
AGGAATTGGCGGCGATAGTT

Downstream 100 bases:

>100_bases
AACAGGCGCAAGAACCTAATTTTTAAACTAATAGATTTTGTATCGTATTATTTAATATCTTTTCAAAGAATACGATGATT
ATTTACTAGTGAGGTATGGA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MKFPVEQILNLPETKVLDCQEVEGAGIIITIEKAVNHCSCPNCGNVTQSIHQDHWRMIHDLPWSEKPVLLKINRRQFKCH
KCKKVFSEKLEFVEKSKGYTKRLAASIVEQVLNSNIHSVAKRNDLSDEEVESMLKRQVTQIQKINLRGLKRLGIDEIALV
KGQGNYLAVIVDLDTRKPIEIVKTRRIEEIGEVMKGWGFKVLEQIQEVSIDLWSPYKSLVEELMPNANITADRFHVMKQV
NDELDTIRKSEKKAAMSLEDKSEKERILAGLNKSKYSLIKNEDSLNEEQKIRLKAVQEVSPTLAKMHSLKEKFRQIFESH
TSWGDSIIQLLDWMYDAMLLFPKSIGTMIRWFGEIVGYFDGRTTSGTVEGINNKLKLIKRLGYGFRNFNNFRLRSLLNWH
FSINSP

Sequences:

>Translated_406_residues
MKFPVEQILNLPETKVLDCQEVEGAGIIITIEKAVNHCSCPNCGNVTQSIHQDHWRMIHDLPWSEKPVLLKINRRQFKCH
KCKKVFSEKLEFVEKSKGYTKRLAASIVEQVLNSNIHSVAKRNDLSDEEVESMLKRQVTQIQKINLRGLKRLGIDEIALV
KGQGNYLAVIVDLDTRKPIEIVKTRRIEEIGEVMKGWGFKVLEQIQEVSIDLWSPYKSLVEELMPNANITADRFHVMKQV
NDELDTIRKSEKKAAMSLEDKSEKERILAGLNKSKYSLIKNEDSLNEEQKIRLKAVQEVSPTLAKMHSLKEKFRQIFESH
TSWGDSIIQLLDWMYDAMLLFPKSIGTMIRWFGEIVGYFDGRTTSGTVEGINNKLKLIKRLGYGFRNFNNFRLRSLLNWH
FSINSP
>Mature_406_residues
MKFPVEQILNLPETKVLDCQEVEGAGIIITIEKAVNHCSCPNCGNVTQSIHQDHWRMIHDLPWSEKPVLLKINRRQFKCH
KCKKVFSEKLEFVEKSKGYTKRLAASIVEQVLNSNIHSVAKRNDLSDEEVESMLKRQVTQIQKINLRGLKRLGIDEIALV
KGQGNYLAVIVDLDTRKPIEIVKTRRIEEIGEVMKGWGFKVLEQIQEVSIDLWSPYKSLVEELMPNANITADRFHVMKQV
NDELDTIRKSEKKAAMSLEDKSEKERILAGLNKSKYSLIKNEDSLNEEQKIRLKAVQEVSPTLAKMHSLKEKFRQIFESH
TSWGDSIIQLLDWMYDAMLLFPKSIGTMIRWFGEIVGYFDGRTTSGTVEGINNKLKLIKRLGYGFRNFNNFRLRSLLNWH
FSINSP

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 46914; Mature: 46914

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFPVEQILNLPETKVLDCQEVEGAGIIITIEKAVNHCSCPNCGNVTQSIHQDHWRMIHD
CCCCHHHHCCCCCCCCCCHHHCCCCEEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
LPWSEKPVLLKINRRQFKCHKCKKVFSEKLEFVEKSKGYTKRLAASIVEQVLNSNIHSVA
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHH
KRNDLSDEEVESMLKRQVTQIQKINLRGLKRLGIDEIALVKGQGNYLAVIVDLDTRKPIE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCHH
IVKTRRIEEIGEVMKGWGFKVLEQIQEVSIDLWSPYKSLVEELMPNANITADRFHVMKQV
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
NDELDTIRKSEKKAAMSLEDKSEKERILAGLNKSKYSLIKNEDSLNEEQKIRLKAVQEVS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHH
PTLAKMHSLKEKFRQIFESHTSWGDSIIQLLDWMYDAMLLFPKSIGTMIRWFGEIVGYFD
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GRTTSGTVEGINNKLKLIKRLGYGFRNFNNFRLRSLLNWHFSINSP
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCEECCCC
>Mature Secondary Structure
MKFPVEQILNLPETKVLDCQEVEGAGIIITIEKAVNHCSCPNCGNVTQSIHQDHWRMIHD
CCCCHHHHCCCCCCCCCCHHHCCCCEEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
LPWSEKPVLLKINRRQFKCHKCKKVFSEKLEFVEKSKGYTKRLAASIVEQVLNSNIHSVA
CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHH
KRNDLSDEEVESMLKRQVTQIQKINLRGLKRLGIDEIALVKGQGNYLAVIVDLDTRKPIE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCHH
IVKTRRIEEIGEVMKGWGFKVLEQIQEVSIDLWSPYKSLVEELMPNANITADRFHVMKQV
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
NDELDTIRKSEKKAAMSLEDKSEKERILAGLNKSKYSLIKNEDSLNEEQKIRLKAVQEVS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHH
PTLAKMHSLKEKFRQIFESHTSWGDSIIQLLDWMYDAMLLFPKSIGTMIRWFGEIVGYFD
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GRTTSGTVEGINNKLKLIKRLGYGFRNFNNFRLRSLLNWHFSINSP
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]