Click here to switch to the map view.

The map label for this gene is 17229099

Identifier: 17229099

GI number: 17229099

Start: 1888855

End: 1889493

Strand: Direct

Name: 17229099

Synonym: alr1607

Alternate gene names: NA

Gene position: 1888855-1889493 (Clockwise)

Preceding gene: 17229097

Following gene: 17229101

Centisome position: 29.45

GC content: 40.69

Gene sequence:

>639_bases
GTGGTGAGTTGTGAGTTTTTGGAAGTTATCTCAATTTTAAATTTTTTAGGTGTAAGCCTAAGCCGTAGGCTATGTAGGAA
TTGGGAATTACTTTCTCCCCATCTCCTTCCCACTCCCTTTAATGTTAAAATATGCTTATTAGGCCTGGTTAATTACAATA
TGGTTCAGTACACACTAGCTCAAAGTCCGGAAATTATCCTCACCGTTTCTGGGAAAGATTCAGCCAAAGCCCGCGACAAA
GCTATGGATCAGTTGGTTGAGTTGATTGATGCTGGTAAGCTGCCTACAGAATTAGAAGAAGGATTTGGCCCTCAACAATT
AATAGAGGTGAAAGAGCCATCTACTGACTCAGTTAGTGGTGAAGACTCGATTACACAAGCTGTCCAAGTCTTGAGTAACT
TAGCCACACTCAAGCTAAAAGTGCAGGAGTCACGCTCTGAAGCTTTAGAAATTCGCAAGGCTGTTGATGTTTTATTTTCC
GATGATTCTGTAACGGAAGAAGAAATTACTCGCCTCAAGGAAGGTTTTAAAGTTCTCAAGAATTTTGCTCAAGCAAACCT
ACGCTACCAAGAAGCACGAACTAAAGCAGAACAGGCTAGACAAGTTTTGGATCAGGCTTTAAAATCACCAGACAAATAA

Upstream 100 bases:

>100_bases
GCATAATAGTGGGATTGGGAGCCATAGCTCTTCCCCTCCTGTTGAAATTTTTCTCCTTTACTCAAGTATAAAGTTTGATT
CTCGGAGACTTGTTATTGGC

Downstream 100 bases:

>100_bases
TCGTCTCTATTTGTTAACAGGAAGCTGGGCGAACCTGTTTCAGTTGTTAATGATCGTGTTGACATACTCACCGAGATTCT
ACCTCGGTGATTCTTGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MVSCEFLEVISILNFLGVSLSRRLCRNWELLSPHLLPTPFNVKICLLGLVNYNMVQYTLAQSPEIILTVSGKDSAKARDK
AMDQLVELIDAGKLPTELEEGFGPQQLIEVKEPSTDSVSGEDSITQAVQVLSNLATLKLKVQESRSEALEIRKAVDVLFS
DDSVTEEEITRLKEGFKVLKNFAQANLRYQEARTKAEQARQVLDQALKSPDK

Sequences:

>Translated_212_residues
MVSCEFLEVISILNFLGVSLSRRLCRNWELLSPHLLPTPFNVKICLLGLVNYNMVQYTLAQSPEIILTVSGKDSAKARDK
AMDQLVELIDAGKLPTELEEGFGPQQLIEVKEPSTDSVSGEDSITQAVQVLSNLATLKLKVQESRSEALEIRKAVDVLFS
DDSVTEEEITRLKEGFKVLKNFAQANLRYQEARTKAEQARQVLDQALKSPDK
>Mature_212_residues
MVSCEFLEVISILNFLGVSLSRRLCRNWELLSPHLLPTPFNVKICLLGLVNYNMVQYTLAQSPEIILTVSGKDSAKARDK
AMDQLVELIDAGKLPTELEEGFGPQQLIEVKEPSTDSVSGEDSITQAVQVLSNLATLKLKVQESRSEALEIRKAVDVLFS
DDSVTEEEITRLKEGFKVLKNFAQANLRYQEARTKAEQARQVLDQALKSPDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23664; Mature: 23664

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSCEFLEVISILNFLGVSLSRRLCRNWELLSPHLLPTPFNVKICLLGLVNYNMVQYTLA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
QSPEIILTVSGKDSAKARDKAMDQLVELIDAGKLPTELEEGFGPQQLIEVKEPSTDSVSG
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHCCCCCCCCCCC
EDSITQAVQVLSNLATLKLKVQESRSEALEIRKAVDVLFSDDSVTEEEITRLKEGFKVLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
NFAQANLRYQEARTKAEQARQVLDQALKSPDK
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVSCEFLEVISILNFLGVSLSRRLCRNWELLSPHLLPTPFNVKICLLGLVNYNMVQYTLA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
QSPEIILTVSGKDSAKARDKAMDQLVELIDAGKLPTELEEGFGPQQLIEVKEPSTDSVSG
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHCCCCCCCCCCC
EDSITQAVQVLSNLATLKLKVQESRSEALEIRKAVDVLFSDDSVTEEEITRLKEGFKVLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
NFAQANLRYQEARTKAEQARQVLDQALKSPDK
HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA