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The map label for this gene is 17229056

Identifier: 17229056

GI number: 17229056

Start: 1829479

End: 1831683

Strand: Direct

Name: 17229056

Synonym: alr1564

Alternate gene names: NA

Gene position: 1829479-1831683 (Clockwise)

Preceding gene: 17229055

Following gene: 17229057

Centisome position: 28.52

GC content: 37.05

Gene sequence:

>2205_bases
ATGGGGAATGCACTTCAGCATCAAGTAGATGTATTTGAACAATCTAAGGATGCAGATATTATCCTTGATTTAGCACCAAC
TGGCACAGGTAAAACTAAAGCAGGATTAACAGTATTAAAGCATCAGCAAAATAAAAGTGCTATTTACATTGCTCCAACAA
ATGCTTTAATTGAACAGCAAACAGAAGCCGCAAAAGAATTTGTGCGTGATGCTAACTTACGTCATGTCGTCAAATCTGCT
TCTGCTAAAGACATTAAAAGCTGGCCTAACGATAAAGTTGGTAGTCGTTCAGGGGAAAAGCTGTATAATGTTTTGCGGAA
TCCAGCTACAGTTTTTCCCGATATTGGGGCTAATACACCCATCATTTTAGTCACAAATCCTGACATCTTTTACTATGCAA
CTTTCTTTGCATATAACAACCTAGATAGAGGTAATATTGCTGCTGGTTTTTACACCAAATTTTCGACAGTCATTTTTGAT
GAATTTCACCTCTACGATGCTAAACAGCTAGTAGGAATGCTGTTTTATCTCGCTTATTCTCAAGTTTTTCGCTTTTTTGA
GAACGGACGCAAGGTAGTTTTACTCACAGCAACACCAGAACCAGCTTGTGAATTAGCATTGCAGAATTTAAAACAAGCTG
GTGTGAAGATAGCAAGAATTGATGGAGAAGCTGGTAATACTAGTTTTTTACCGTCACAAACAGCAGTTAATCTAGAATTA
AGACCAAAACCAGATATTAAGGAAGAGTGGTTAGCAGAGTTAGCAGCAGAAGTTATACAACGTTTTCGAGAAAGACCTGA
TGAAAATGGTGCTGTAATTCTTGACTCTCTTGATAATATTAATCGTTTATCAGATTTACTACGACAGCAAGGACTTGGTG
ATGACATCGGACGCATTACAGGCCCTGCACCCAAAAAAGATAGAGAAAGGGCTATGCAGTGTCAAATTATTTTGGCTACT
AGCACTGTAGATGTAGGGTTTAACTTTGAAAGACACCCTAAACCGAAACGGCAAAATTTAGATTGGTTGATTTTTTCAGC
ACGCGATCGCGCCGCATTTTGGCAGAGAATTGGTAGAGTAGGGCGTGTTTTGGGTAAATCTGAAACTAATATTGATTCAG
AAGCCATTGCTTACTTACCTGCTAACGCCTGGGAAGAAGGTTTAACGTCTCTAGATACTACTGGGGGACGTACAGCGCTA
AAAGATGTACTTGAAACACTTCCTTGTTTGGATAAACCTTTTTTAAAAGCTTACTGGCGTTCAGAAGCATTTCTAGAAAT
TGCCCGTCCCTTATTAGAATTGGAAGAAATGCTTGAAGGTTTAGCTGAGGAAAAATTAATTTTGGAGTTATTCAATACTC
TAAAATCTATTTTTGAAGGAAACAGAACTTGGGATGATTATCGCTATAGAATGAAACTTTTACGAGGTGCTGAAACTATT
GCCAAAAAAACGCCCAAAGAAATCAAAAAGGATTGGAAGTATATCAAAGGTGGTCAGGCTTTTGTCAGAACCTTTATCAA
AGCCAAGTTTATTGAAGATTGGGAAGATTTACAATCCGGACGAGCCACCATAGAAGAATACATAAACTTATTGCTTAAAC
AAGATGACGATGTATTAGCTGAATTAAAAGAATTTGCTGAAGTTTTTAGTATAAGTTATGCACCTTTATTTAGTTTTCGC
TCTAGTCTGTTTGAAACTCTTTCCATTCGTGACCCTCATGGTTTGATTCTAGATGAATCGGAGGAAACAAGACTAGATAC
TTTTCACCTATTACGCTATTATGAATTTGTCCAAAATGGTGATTATATTGAAGTCGCCAGTCGTGCTAATGAAACTTATC
AATTGAGTTTTGAATTACGCTACACCGATAACTGGCAAGAATTTATCAGTACAGAACTGAACAAACTAACAGCTTTTAAA
AATTGTCAAATTATCCGCAGTGCTGGAGGCGCAATAAGACCCACGCCCCTAATACAAGCTTTGAATAAGCATCTCTTACC
AGGAGTAATTATTTGCCCAAGAACAAATGCTACTGTTATTTTCCAATTGAACAAGCAAGGAATCACTTCTTATCCAATAA
CCATTGTTTGTAATGATATGGAAAAAGAATATAGATTATTTTCAGGCTTGTCAGGAATTTTAACAATAGCAATGAAGTTT
AAACAGCTACGTCTGCCTGATGATGAAGTTTTTATTGCGGGATAA

Upstream 100 bases:

>100_bases
TGCGGTAGAGAAAGTAACAATGAGTAATCAAAGATTAGTTATCAGATTAGAACCGCGCAGTATTTCAGCTTGTGCATCTT
TGCCAGATGAACTATCTTTT

Downstream 100 bases:

>100_bases
GTAATTCAACTCTAGTACCATTGGTGCGAGAATTTGTTGAACATCAATTTATAAGTATATTTCCCTCTCATCCTCCGTGA
AACACTATCAACAACAAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: DEAD/DEAH Box Helicase-Like Protein; DEAD/DEAH Box Helicase Domain-Containing Protein; Cyano-Type CRISPR-Associated Helicase; Helicase Superfamily Protein; CRISPR-Associated Helicase Cas3 Family

Number of amino acids: Translated: 734; Mature: 733

Protein sequence:

>734_residues
MGNALQHQVDVFEQSKDADIILDLAPTGTGKTKAGLTVLKHQQNKSAIYIAPTNALIEQQTEAAKEFVRDANLRHVVKSA
SAKDIKSWPNDKVGSRSGEKLYNVLRNPATVFPDIGANTPIILVTNPDIFYYATFFAYNNLDRGNIAAGFYTKFSTVIFD
EFHLYDAKQLVGMLFYLAYSQVFRFFENGRKVVLLTATPEPACELALQNLKQAGVKIARIDGEAGNTSFLPSQTAVNLEL
RPKPDIKEEWLAELAAEVIQRFRERPDENGAVILDSLDNINRLSDLLRQQGLGDDIGRITGPAPKKDRERAMQCQIILAT
STVDVGFNFERHPKPKRQNLDWLIFSARDRAAFWQRIGRVGRVLGKSETNIDSEAIAYLPANAWEEGLTSLDTTGGRTAL
KDVLETLPCLDKPFLKAYWRSEAFLEIARPLLELEEMLEGLAEEKLILELFNTLKSIFEGNRTWDDYRYRMKLLRGAETI
AKKTPKEIKKDWKYIKGGQAFVRTFIKAKFIEDWEDLQSGRATIEEYINLLLKQDDDVLAELKEFAEVFSISYAPLFSFR
SSLFETLSIRDPHGLILDESEETRLDTFHLLRYYEFVQNGDYIEVASRANETYQLSFELRYTDNWQEFISTELNKLTAFK
NCQIIRSAGGAIRPTPLIQALNKHLLPGVIICPRTNATVIFQLNKQGITSYPITIVCNDMEKEYRLFSGLSGILTIAMKF
KQLRLPDDEVFIAG

Sequences:

>Translated_734_residues
MGNALQHQVDVFEQSKDADIILDLAPTGTGKTKAGLTVLKHQQNKSAIYIAPTNALIEQQTEAAKEFVRDANLRHVVKSA
SAKDIKSWPNDKVGSRSGEKLYNVLRNPATVFPDIGANTPIILVTNPDIFYYATFFAYNNLDRGNIAAGFYTKFSTVIFD
EFHLYDAKQLVGMLFYLAYSQVFRFFENGRKVVLLTATPEPACELALQNLKQAGVKIARIDGEAGNTSFLPSQTAVNLEL
RPKPDIKEEWLAELAAEVIQRFRERPDENGAVILDSLDNINRLSDLLRQQGLGDDIGRITGPAPKKDRERAMQCQIILAT
STVDVGFNFERHPKPKRQNLDWLIFSARDRAAFWQRIGRVGRVLGKSETNIDSEAIAYLPANAWEEGLTSLDTTGGRTAL
KDVLETLPCLDKPFLKAYWRSEAFLEIARPLLELEEMLEGLAEEKLILELFNTLKSIFEGNRTWDDYRYRMKLLRGAETI
AKKTPKEIKKDWKYIKGGQAFVRTFIKAKFIEDWEDLQSGRATIEEYINLLLKQDDDVLAELKEFAEVFSISYAPLFSFR
SSLFETLSIRDPHGLILDESEETRLDTFHLLRYYEFVQNGDYIEVASRANETYQLSFELRYTDNWQEFISTELNKLTAFK
NCQIIRSAGGAIRPTPLIQALNKHLLPGVIICPRTNATVIFQLNKQGITSYPITIVCNDMEKEYRLFSGLSGILTIAMKF
KQLRLPDDEVFIAG
>Mature_733_residues
GNALQHQVDVFEQSKDADIILDLAPTGTGKTKAGLTVLKHQQNKSAIYIAPTNALIEQQTEAAKEFVRDANLRHVVKSAS
AKDIKSWPNDKVGSRSGEKLYNVLRNPATVFPDIGANTPIILVTNPDIFYYATFFAYNNLDRGNIAAGFYTKFSTVIFDE
FHLYDAKQLVGMLFYLAYSQVFRFFENGRKVVLLTATPEPACELALQNLKQAGVKIARIDGEAGNTSFLPSQTAVNLELR
PKPDIKEEWLAELAAEVIQRFRERPDENGAVILDSLDNINRLSDLLRQQGLGDDIGRITGPAPKKDRERAMQCQIILATS
TVDVGFNFERHPKPKRQNLDWLIFSARDRAAFWQRIGRVGRVLGKSETNIDSEAIAYLPANAWEEGLTSLDTTGGRTALK
DVLETLPCLDKPFLKAYWRSEAFLEIARPLLELEEMLEGLAEEKLILELFNTLKSIFEGNRTWDDYRYRMKLLRGAETIA
KKTPKEIKKDWKYIKGGQAFVRTFIKAKFIEDWEDLQSGRATIEEYINLLLKQDDDVLAELKEFAEVFSISYAPLFSFRS
SLFETLSIRDPHGLILDESEETRLDTFHLLRYYEFVQNGDYIEVASRANETYQLSFELRYTDNWQEFISTELNKLTAFKN
CQIIRSAGGAIRPTPLIQALNKHLLPGVIICPRTNATVIFQLNKQGITSYPITIVCNDMEKEYRLFSGLSGILTIAMKFK
QLRLPDDEVFIAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83332; Mature: 83201

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNALQHQVDVFEQSKDADIILDLAPTGTGKTKAGLTVLKHQQNKSAIYIAPTNALIEQQ
CCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCHHHEEECCCCCEEEEECCHHHHHHH
TEAAKEFVRDANLRHVVKSASAKDIKSWPNDKVGSRSGEKLYNVLRNPATVFPDIGANTP
HHHHHHHHHCCHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCCC
IILVTNPDIFYYATFFAYNNLDRGNIAAGFYTKFSTVIFDEFHLYDAKQLVGMLFYLAYS
EEEEECCCEEEEEEEHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVFRFFENGRKVVLLTATPEPACELALQNLKQAGVKIARIDGEAGNTSFLPSQTAVNLEL
HHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEE
RPKPDIKEEWLAELAAEVIQRFRERPDENGAVILDSLDNINRLSDLLRQQGLGDDIGRIT
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHCC
GPAPKKDRERAMQCQIILATSTVDVGFNFERHPKPKRQNLDWLIFSARDRAAFWQRIGRV
CCCCCHHHHHHHEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHH
GRVLGKSETNIDSEAIAYLPANAWEEGLTSLDTTGGRTALKDVLETLPCLDKPFLKAYWR
HHHHCCCCCCCCCHHEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
SEAFLEIARPLLELEEMLEGLAEEKLILELFNTLKSIFEGNRTWDDYRYRMKLLRGAETI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AKKTPKEIKKDWKYIKGGQAFVRTFIKAKFIEDWEDLQSGRATIEEYINLLLKQDDDVLA
HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ELKEFAEVFSISYAPLFSFRSSLFETLSIRDPHGLILDESEETRLDTFHLLRYYEFVQNG
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCC
DYIEVASRANETYQLSFELRYTDNWQEFISTELNKLTAFKNCQIIRSAGGAIRPTPLIQA
CEEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHH
LNKHLLPGVIICPRTNATVIFQLNKQGITSYPITIVCNDMEKEYRLFSGLSGILTIAMKF
HHHHCCCCEEEECCCCCEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
KQLRLPDDEVFIAG
HHHCCCCCCEEEEC
>Mature Secondary Structure 
GNALQHQVDVFEQSKDADIILDLAPTGTGKTKAGLTVLKHQQNKSAIYIAPTNALIEQQ
CCHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHCHHHEEECCCCCEEEEECCHHHHHHH
TEAAKEFVRDANLRHVVKSASAKDIKSWPNDKVGSRSGEKLYNVLRNPATVFPDIGANTP
HHHHHHHHHCCHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCCC
IILVTNPDIFYYATFFAYNNLDRGNIAAGFYTKFSTVIFDEFHLYDAKQLVGMLFYLAYS
EEEEECCCEEEEEEEHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVFRFFENGRKVVLLTATPEPACELALQNLKQAGVKIARIDGEAGNTSFLPSQTAVNLEL
HHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEE
RPKPDIKEEWLAELAAEVIQRFRERPDENGAVILDSLDNINRLSDLLRQQGLGDDIGRIT
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHCC
GPAPKKDRERAMQCQIILATSTVDVGFNFERHPKPKRQNLDWLIFSARDRAAFWQRIGRV
CCCCCHHHHHHHEEEEEEEEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHH
GRVLGKSETNIDSEAIAYLPANAWEEGLTSLDTTGGRTALKDVLETLPCLDKPFLKAYWR
HHHHCCCCCCCCCHHEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
SEAFLEIARPLLELEEMLEGLAEEKLILELFNTLKSIFEGNRTWDDYRYRMKLLRGAETI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
AKKTPKEIKKDWKYIKGGQAFVRTFIKAKFIEDWEDLQSGRATIEEYINLLLKQDDDVLA
HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ELKEFAEVFSISYAPLFSFRSSLFETLSIRDPHGLILDESEETRLDTFHLLRYYEFVQNG
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCC
DYIEVASRANETYQLSFELRYTDNWQEFISTELNKLTAFKNCQIIRSAGGAIRPTPLIQA
CEEEEECCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHH
LNKHLLPGVIICPRTNATVIFQLNKQGITSYPITIVCNDMEKEYRLFSGLSGILTIAMKF
HHHHCCCCEEEECCCCCEEEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
KQLRLPDDEVFIAG
HHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA